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Report for Sequence Feature Glyma.11g014000

Feature Type:gene_model
Chromosome:Gm11
Start:956851
stop:964634
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.11g014000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G10050.1AT esterase/lipase/thioesterase family protein JGI N/AIEA
GO:0006482GO-bp protein demethylation EnsemblGenomesN/AIEA
GO:0006505GO-bp GPI anchor metabolic process JGI N/AIEA
GO:0006886GO-bp intracellular protein transport JGI N/AIEA
GO:0009058GO-bp biosynthetic process JGI N/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
GO:0016788GO-mf hydrolase activity, acting on ester bonds JGI N/AIEA
GO:0051723GO-mf protein methylesterase activity EnsemblGenomesN/AIEA
GO:0052689GO-mf carboxylic ester hydrolase activity EnsemblGenomesN/AIEA
KOG2564 KOG Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold JGI N/AIEA
PTHR14189Panther PROTEIN PHOSPHATASE METHYLESTERASE-1 RELATED JGI N/AIEA
PF00561PFAM alpha/beta hydrolase fold JGI N/AIEA

Expression Patterns of Glyma.11g014000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.11g014000
ParalogEvidenceComments
Glyma.01g230800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.11g014000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma11g01610 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.11g014000
>Glyma.11g014000.2 sequence-type=transcript locus=Glyma.11g014000 ID=Glyma.11g014000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TAACATGTAAAGATCTTGGGGCATAAAATAAAATAAAAATAAAAAATGTTTGACACTAGAAGAAGTAAAGGTTGCTGCAAGTGTTTGGAGTTTGGAGTTTCgagatcgagagagagagagagaaagCGCCATGGATTCTTCTTCACACATGGCTTCGCTTCCGGAAGATATCATCACCGACGAGCATTTACAACAGCAAACTCAACCCGCCTCAGCCTCTGCTTTCGCTTCCGTTCCTCAGCGCCCGCCAACTAAGAGCTCTTCAGAAAAATATGCACCTTTAGATTGGTCCGTGTATTTTGACAAAGAAGACGATGTTGCAATTCCCGAATCGAACGATGTTTTTCATGTTTACACGGCAGGAACTGAGGGTCCCGTTGTATTCTGTTTACACGGTGGTGGTTATTCTGGGCTTTCTTTTGCTGTCTCAGCAAGTAAAATTAAGGAGAAAGCTAGGGTAGTTGCAATGGACTTGAGAGGTCATGGGAAATCATTGACAGAAGATGATCTTGACTTATCTGTTGAGACTATGTGCAATGATGTATTGGCTGTTATAAAGGAATTATATAGCGACTCTCCTCCAGCCATCATTCTTGTTGGTCACAGCATGGGAGGATCAATTGCTGTGCATGTTGCTGCAAGGAGATCATTGTCTGCCTTGGCGGGGTTGGTTGTTGTGGATGTTGTAGAGGGAACAGCAATGGCTTCACTAATTCATATGCAGAAAATCCTATCAAGCAGGATGCAACATTTTTCAAGCATTGAAAAAGCTATTGAATGGAGTGTCAGGGGTGGCTCTTTAAGAAATATTGATTCTGCTCGTGTATCAATCCCTGCCACATTAAAGTATGACCATTCAAAGAAATGTTATCTTTACCGAACTGAGCTGGAAAAGACTGAACAATATTGGAAAGGCTGGTATGAAGGCCTCTCAGATAAATTTTTGTCATGTCCTGTGCCAAAACTGTTGTTATTAGCCGGAACAGATAGATTGGACAGGTCTCTCACAATTGGTCAAATGCAAGGGAAGTTTCAAATGGTAGTTGTAAGGCATACAGGGCATGCTATTCAGGAAGATGTACCTGATGAATTTGCAACTCTGATTGTTAACTTCATTTCTCGTAACCGAATAGGCCCTCATGGAATTGAGATACCTGGCCTTCGCAAGCCAGCCTTTTCCAAACCTTGAATCTGGTATTAGATAAACCAAGAATGACCACCACTGCAAGATGAAGATGATGAATTTCTTACTTTGACATTCCTTTAGTTTTATACCGTGCTTCTATGTTTTGACGGGGGAGGAGGGTAGGTGAAGCGATTATATATTATATATTATATATTTCAGACTATTATCAAATGTAATGAGCAATGGGTAAGATGGGATTGGACATAGATTTTCGCTCATAGCTAGCAACGTTAGGTGTCCCTTGCTTTGAGTGTTTTTGGTTTTCATCTTTAAAGAAAATAAAAAATAAAAGTAAAAATACGTTCGCttaaaatttagaaattat

>Glyma.11g014000.3 sequence-type=transcript locus=Glyma.11g014000 ID=Glyma.11g014000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACTAGAAGAAGTAAAGGTTGCTGCAAGTGTTTGGAGTTTGGAGTTTCgagatcgagagagagagagagaaagCGCCATGGATTCTTCTTCACACATGGCTTCGCTTCCGGAAGATATCATCACCGACGAGCATTTACAACAGCAAACTCAACCCGCCTCAGCCTCTGCTTTCGCTTCCGTTCCTCAGCGCCCGCCAACTAAGAGCTCTTCAGAAAAATATGCACCTTTAGATTGGTCCGTGTATTTTGACAAAGAAGACGATGTTGCAATTCCCGAATCGAACGATGTTTTTCATGTTTACACGGCAGGAACTGAGGGTCCCGTTGTATTCTGTTTACACGGTGGTGGTTATTCTGGGCTTTCTTTTGCTGTCTCAGCAAGTAAAATTAAGGAGAAAGCTAGGGTAGTTGCAATGGACTTGAGAGGTCATGGGAAATCATTGACAGAAGATGATCTTGACTTATCTGTTGAGACTATGTGCAATGATGTATTGGCTGTTATAAAGGAATTATATAGCGACTCTCCTCCAGCCATCATTCTTGTTGGTCACAGCATGGGAGGATCAATTGCTGTGCATGTTGCTGCAAGGAGATCATTGTCTGCCTTGGCGGGGTTGGTTGTTGTGGATGTTGTAGAGGGAACAGCAATGGCTTCACTAATTCATATGCAGAAAATCCTATCAAGCAGGATGCAACATTTTTCAAGCATTGAAAAAGCTATTGAATGGAGTGTCAGGGGTGGCTCTTTAAGAAATATTGATTCTGCTCGTGTATCAATCCCTGCCACATTAAAGTATGACCATTCAAAGAAATGTTATCTTTACCGAACTGAGCTGGAAAAGACTGAACAATATTGGAAAGGCTGGTATGAAGGCCTCTCAGATAAATTTTTGTCATGTCCTGTGCCAAAACTGTTGTTATTAGCCGGAACAGATAGATTGGACAGGTCTCTCACAATTGGTCAAATGCAAGGGAAGTTTCAAATGGTAGTTGTAAGGCATACAGGGCATGCTATTCAGATGTACCTGATGAATTTGCAACTCTGATTGTTAACTTCATTTCTCGTAACCGAATAGGCCCTCATGGAATTGAGATACCTGGCCTTCGCAAGCCAGCCTTTTCCAAACCTTGAATCTGGTATTAGATAAACCAAGAATGACCACCACTGCAAGATGAAGATGATGAATTTCTTACTTTGACATTCCTTTAGTTTTATACCGTGCTTCTATGTTTTGACGGGGGAGGAGGGTAGGTGAAGCGATTATATATTATATATTATATATTTCAGACTATTATCAAATGTAATGAGCAATGGGTAAGATGGGATTGGACATAGATTTTCGCTCATAGCTAGCAACGTTAGGTGTCCCTTGCTTTGAGTGTTTTTGGTTTTCATCTTTAAAGAAAATAAAAAATAAAAGTAAAAATACGTTCGCttaaaatttagaaattat
Coding sequences of Glyma.11g014000
>Glyma.11g014000.1 sequence-type=CDS polypeptide=Glyma.11g014000.1.p locus=Glyma.11g014000 ID=Glyma.11g014000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATTCTTCTTCACACATGGCTTCGCTTCCGGAAGATATCATCACCGACGAGCATTTACAACAGCAAACTCAACCCGCCTCAGCCTCTGCTTTCGCTTCCGTTCCTCAGCGCCCGCCAACTAAGAGCTCTTCAGAAAAATATGCACCTTTAGATTGGTCCGTGTATTTTGACAAAGAAGACGATGTTGCAATTCCCGAATCGAACGATGTTTTTCATGTTTACACGGCAGGAACTGAGGGTCCCGTTGTATTCTGTTTACACGGTGGTGGTTATTCTGGGCTTTCTTTTGCTGTCTCAGCAAGTAAAATTAAGGAGAAAGCTAGGGTAGTTGCAATGGACTTGAGAGGTCATGGGAAATCATTGACAGAAGATGATCTTGACTTATCTGTTGAGACTATGTGCAATGATGTATTGGCTGTTATAAAGGAATTATATAGCGACTCTCCTCCAGCCATCATTCTTGTTGGTCACAGCTGTATAATATTATTAACTATCATCGGTAAAAAATTGCTTCATCATCAAAGCATGGGAGGATCAATTGCTGTGCATGTTGCTGCAAGGAGATCATTGTCTGCCTTGGCGGGGTTGGTTGTTGTGGATGTTGTAGAGGGAACAGCAATGGCTTCACTAATTCATATGCAGAAAATCCTATCAAGCAGGATGCAACATTTTTCAAGCATTGAAAAAGCTATTGAATGGAGTGTCAGGGGTGGCTCTTTAAGAAATATTGATTCTGCTCGTGTATCAATCCCTGCCACATTAAAGTATGACCATTCAAAGAAATGTTATCTTTACCGAACTGAGCTGGAAAAGACTGAACAATATTGGAAAGGCTGGTATGAAGGCCTCTCAGATAAATTTTTGTCATGTCCTGTGCCAAAACTGTTGTTATTAGCCGGAACAGATAGATTGGACAGGTCTCTCACAATTGGTCAAATGCAAGGGAAGTTTCAAATGGTAGTTGTAAGGCATACAGGGCATGCTATTCAGGAAGATGTACCTGATGAATTTGCAACTCTGATTGTTAACTTCATTTCTCGTAACCGAATAGGCCCTCATGGAATTGAGATACCTGGCCTTCGCAAGCCAGCCTTTTCCAAACCTTGA

>Glyma.11g014000.2 sequence-type=CDS polypeptide=Glyma.11g014000.2.p locus=Glyma.11g014000 ID=Glyma.11g014000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATTCTTCTTCACACATGGCTTCGCTTCCGGAAGATATCATCACCGACGAGCATTTACAACAGCAAACTCAACCCGCCTCAGCCTCTGCTTTCGCTTCCGTTCCTCAGCGCCCGCCAACTAAGAGCTCTTCAGAAAAATATGCACCTTTAGATTGGTCCGTGTATTTTGACAAAGAAGACGATGTTGCAATTCCCGAATCGAACGATGTTTTTCATGTTTACACGGCAGGAACTGAGGGTCCCGTTGTATTCTGTTTACACGGTGGTGGTTATTCTGGGCTTTCTTTTGCTGTCTCAGCAAGTAAAATTAAGGAGAAAGCTAGGGTAGTTGCAATGGACTTGAGAGGTCATGGGAAATCATTGACAGAAGATGATCTTGACTTATCTGTTGAGACTATGTGCAATGATGTATTGGCTGTTATAAAGGAATTATATAGCGACTCTCCTCCAGCCATCATTCTTGTTGGTCACAGCATGGGAGGATCAATTGCTGTGCATGTTGCTGCAAGGAGATCATTGTCTGCCTTGGCGGGGTTGGTTGTTGTGGATGTTGTAGAGGGAACAGCAATGGCTTCACTAATTCATATGCAGAAAATCCTATCAAGCAGGATGCAACATTTTTCAAGCATTGAAAAAGCTATTGAATGGAGTGTCAGGGGTGGCTCTTTAAGAAATATTGATTCTGCTCGTGTATCAATCCCTGCCACATTAAAGTATGACCATTCAAAGAAATGTTATCTTTACCGAACTGAGCTGGAAAAGACTGAACAATATTGGAAAGGCTGGTATGAAGGCCTCTCAGATAAATTTTTGTCATGTCCTGTGCCAAAACTGTTGTTATTAGCCGGAACAGATAGATTGGACAGGTCTCTCACAATTGGTCAAATGCAAGGGAAGTTTCAAATGGTAGTTGTAAGGCATACAGGGCATGCTATTCAGGAAGATGTACCTGATGAATTTGCAACTCTGATTGTTAACTTCATTTCTCGTAACCGAATAGGCCCTCATGGAATTGAGATACCTGGCCTTCGCAAGCCAGCCTTTTCCAAACCTTGA

>Glyma.11g014000.3 sequence-type=CDS polypeptide=Glyma.11g014000.3.p locus=Glyma.11g014000 ID=Glyma.11g014000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATTCTTCTTCACACATGGCTTCGCTTCCGGAAGATATCATCACCGACGAGCATTTACAACAGCAAACTCAACCCGCCTCAGCCTCTGCTTTCGCTTCCGTTCCTCAGCGCCCGCCAACTAAGAGCTCTTCAGAAAAATATGCACCTTTAGATTGGTCCGTGTATTTTGACAAAGAAGACGATGTTGCAATTCCCGAATCGAACGATGTTTTTCATGTTTACACGGCAGGAACTGAGGGTCCCGTTGTATTCTGTTTACACGGTGGTGGTTATTCTGGGCTTTCTTTTGCTGTCTCAGCAAGTAAAATTAAGGAGAAAGCTAGGGTAGTTGCAATGGACTTGAGAGGTCATGGGAAATCATTGACAGAAGATGATCTTGACTTATCTGTTGAGACTATGTGCAATGATGTATTGGCTGTTATAAAGGAATTATATAGCGACTCTCCTCCAGCCATCATTCTTGTTGGTCACAGCATGGGAGGATCAATTGCTGTGCATGTTGCTGCAAGGAGATCATTGTCTGCCTTGGCGGGGTTGGTTGTTGTGGATGTTGTAGAGGGAACAGCAATGGCTTCACTAATTCATATGCAGAAAATCCTATCAAGCAGGATGCAACATTTTTCAAGCATTGAAAAAGCTATTGAATGGAGTGTCAGGGGTGGCTCTTTAAGAAATATTGATTCTGCTCGTGTATCAATCCCTGCCACATTAAAGTATGACCATTCAAAGAAATGTTATCTTTACCGAACTGAGCTGGAAAAGACTGAACAATATTGGAAAGGCTGGTATGAAGGCCTCTCAGATAAATTTTTGTCATGTCCTGTGCCAAAACTGTTGTTATTAGCCGGAACAGATAGATTGGACAGGTCTCTCACAATTGGTCAAATGCAAGGGAAGTTTCAAATGGTAGTTGTAAGGCATACAGGGCATGCTATTCAGATGTACCTGATGAATTTGCAACTCTGA
Predicted protein sequences of Glyma.11g014000
>Glyma.11g014000.1.p sequence-type=predicted peptide transcript=Glyma.11g014000.1 locus=Glyma.11g014000 ID=Glyma.11g014000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDSSSHMASLPEDIITDEHLQQQTQPASASAFASVPQRPPTKSSSEKYAPLDWSVYFDKEDDVAIPESNDVFHVYTAGTEGPVVFCLHGGGYSGLSFAVSASKIKEKARVVAMDLRGHGKSLTEDDLDLSVETMCNDVLAVIKELYSDSPPAIILVGHSCIILLTIIGKKLLHHQSMGGSIAVHVAARRSLSALAGLVVVDVVEGTAMASLIHMQKILSSRMQHFSSIEKAIEWSVRGGSLRNIDSARVSIPATLKYDHSKKCYLYRTELEKTEQYWKGWYEGLSDKFLSCPVPKLLLLAGTDRLDRSLTIGQMQGKFQMVVVRHTGHAIQEDVPDEFATLIVNFISRNRIGPHGIEIPGLRKPAFSKP*

>Glyma.11g014000.2.p sequence-type=predicted peptide transcript=Glyma.11g014000.2 locus=Glyma.11g014000 ID=Glyma.11g014000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDSSSHMASLPEDIITDEHLQQQTQPASASAFASVPQRPPTKSSSEKYAPLDWSVYFDKEDDVAIPESNDVFHVYTAGTEGPVVFCLHGGGYSGLSFAVSASKIKEKARVVAMDLRGHGKSLTEDDLDLSVETMCNDVLAVIKELYSDSPPAIILVGHSMGGSIAVHVAARRSLSALAGLVVVDVVEGTAMASLIHMQKILSSRMQHFSSIEKAIEWSVRGGSLRNIDSARVSIPATLKYDHSKKCYLYRTELEKTEQYWKGWYEGLSDKFLSCPVPKLLLLAGTDRLDRSLTIGQMQGKFQMVVVRHTGHAIQEDVPDEFATLIVNFISRNRIGPHGIEIPGLRKPAFSKP*

>Glyma.11g014000.3.p sequence-type=predicted peptide transcript=Glyma.11g014000.3 locus=Glyma.11g014000 ID=Glyma.11g014000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDSSSHMASLPEDIITDEHLQQQTQPASASAFASVPQRPPTKSSSEKYAPLDWSVYFDKEDDVAIPESNDVFHVYTAGTEGPVVFCLHGGGYSGLSFAVSASKIKEKARVVAMDLRGHGKSLTEDDLDLSVETMCNDVLAVIKELYSDSPPAIILVGHSMGGSIAVHVAARRSLSALAGLVVVDVVEGTAMASLIHMQKILSSRMQHFSSIEKAIEWSVRGGSLRNIDSARVSIPATLKYDHSKKCYLYRTELEKTEQYWKGWYEGLSDKFLSCPVPKLLLLAGTDRLDRSLTIGQMQGKFQMVVVRHTGHAIQMYLMNLQL*






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