SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.11g012000

Feature Type:gene_model
Chromosome:Gm11
Start:831690
stop:848787
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.11g012000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G54130.1AT AT-RSH3,ATRSH3,RSH3 JGI N/AIEA
GO:0015969GO-bp guanosine tetraphosphate metabolic process JGI N/AIEA
PTHR21262PantherFam GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE JGI N/AIEA
PF01966Pfam HD domain JGI N/AIEA
PF02824Pfam TGS domain JGI N/AIEA
PF04607Pfam Region found in RelA / SpoT proteins JGI N/AIEA

Gene model name correspondences to Glyma.11g012000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma11g01405 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.11g012000
>Glyma.11g012000.12 sequence-type=CDS polypeptide=Glyma.11g012000.12.p locus=Glyma.11g012000 id=Glyma.11g012000.12.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTACTGGCTACCCTATATTTGACGATGCAAAGGCAGGTACAGAAGGCTATAGCTTTTGCAAGGAAAGCACACCGTGGCCAAATGCGGAAGACAGGAGACCCTTATTTAACACATTGTATCCACACAGGAAGAATTTTGGCTGCATTGGTTCCATCAAGTGGTAAACGAGCTGTTGACACTGTTGTGGCTGGTATTTTACATGATGTGGTTGACGACACTTGCCAAAGTCTGCGGGACATTGAGGCAGAGTTTGGGGATGATGTGGTCAAGTTGGTAGCCAGTGTTTCAAGGTTAAGCTATATTAATCAGCTATTACGCAGAAATCGGAGGGTAAGTGTAAACCAGGGTGTCCTTGGCCAAGAAGAGGCAAGTAATTTACGAGTGATGCTTTTGGGAATGGTTGATGATCCACGTGTTGTGCTCATCAAGCTTGCAGATCGTCTTCACAACATGAGAACAATTTATGCCCTGCCATTGCAAAAAGCTCAAGCTGTTGCAGAGGAGACCTTAATCATTTGGTGTTCACTTGCTTCAAGATTGGGTCTGTGGGCATTGAAAGCTGAACTGGAAGATTTATGCTTTGCTGTTCTGCAGCCTCAAATATTTCAAAAGATGCGAGCTGATCTTGCTTCCATGTGGAGTCCTACTAGCAGAACAGGAAACCCGAGAAGATTATCAATAAAAGGCAACTTGATACATTTGGACGAGAACAGTTCAACTGCTTTCTGCAATGGATCCTTGACATTCAATGAGGATGTAAATAGGAAGGATCTTTTGGAAGCTGTAGTCCCATTTGATATATTGTTGGATCGGAGAAAACGGGCTAACTATCTCAGTAGTATTGGGAATAATCTAGAGACATGCAAAAAACCAAAGGTTGTTCAAGAGGCTGGGCTAGCTTTGGCAACAATGGTAATTTGCGAGGAAGCACTTGAGCGAGAAATGATTATATCATCTTCTTATGTTCCAGGAATGGAAATTACATTATCAAGCCGATTAAAAAGCCTCTATAGTTTATACAGCAAGATGAAACGAAAGGATGTAAGCATTGATAAAGTATATGATGCACGTGCATTAAGAGTAGTTGTGGGAGACAAGAATGGAACTTTACACGGTCCTGCAGTTCGGTGTTGTTATAGTCTTCTTGACATTGTACACAGGCTTTGGACTCCAATAGATGGTGAATTTGATGATTACATCATTAATCCAAAGCCTAGTGGCTATCAGTCCTTGCACACTGCAGTCCAAGGTCCTGACAACTCACCTTTAGAAGTACAAATAAGGACACAGAGGATGCATGAGTGTGCTGAACATGGACTTGCTGCACATTGGCTTTACAAGGAAACTGGGAATCCTTTTTTATCCATAGACAGCATGGATGAACCTGAAACTGAAGCATCCTCCTATTTCTCCAAAAATCTAGAGGAAGGAAATTCTTCAGATATTTTATCAAGTAAATATAAGTCATTGAAGGCTGGACATCCAGTCCTCAGAGTAGAAGGAAGTCACTTACTTGCTGCGGTTATCATCAGTGTAGAGAATGATGAAAGAGAATTGCTAGTTGCTGTGAGCTTTGGGCTAGCAGCTTCTGAAGCAGTAGCTGACAGAAGATCTTTCCAGATTAAGCGATGGGAAGCTTATGCACGACTTTACAAAAAGGTGTCTGATGAATGGTGGTTTGAACCAGGGCATGGGGATTGGTTTACTTGTCTAGAGAAGTACACACTGTGTCGAGATGGTATGTATCATAAGCAAGACCAATTTGGGCGCCTACTCCCAACATTCATCCAGGTTATCAATTTTACTGAGCAAGAAAAATCTGAATATTGGGCTGTTGTATCTGCTGTGTTTGAGGGCAGGCAAGTGGACTGGATAACATCTCGGTCAAAATTTGACTTGGTTGCATCAACTTCTGTAGAAGCTGGCATCGATAACAAGGTGAACCTGTTGAGAACAATGCTTTCTTGGGAAGAGCAATTGCGCTCTGAAGTAAATTTCAAGCAAACAAAGCATGATGTAAAGCTTTATGATCTTCATGGTTCTCTTGGGGAGGTGGTAATTATATGTTGGCCTCATGGTGAAATTTTGAGGCTAAAGGCCGGTAGCACTGCTACTGATGCAGCTCAAAGAGTTGGTTTGGAGGGAAAGCTGGTTTTGATTAATGGACAGCTAGTACTGCCCAACACAAAACTCAAAGATGGCGATGTAGTTGAAGTAAGAATTTAA

>Glyma.11g012000.13 sequence-type=CDS polypeptide=Glyma.11g012000.13.p locus=Glyma.11g012000 id=Glyma.11g012000.13.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCATGAGCGTGCTCTCATGCCAACGTTCTACAATGTTAGCAGCTCAGAACAAGTCTCCATTTCTTCGCAGATTCCGATCCTTCAAACCTTACCGTTCTCGATTTCGCTGTTTGCTTGACCAAATCGCTGCTCCCACTCTTCTCACCTCCGATAATGTCATCGCCGCCGCCAAAGCTGCTTCCGCACACAGCGCCGTCTCCTCCGCCATCACACAGGTCGCCGTCACCGCCTTCGCAATTGCTTCTGGCGCTTGTCTTTCCACCAAGGTTGATTTCCTTTGGCCCAAACTGCAGGAACAACCAGGTACTGTGATGCTGGATGGAGTAGATGTTACTGGCTACCCTATATTTGACGATGCAAAGGTACAGAAGGCTATAGCTTTTGCAAGGAAAGCACACCGTGGCCAAATGCGGAAGACAGGAGACCCTTATTTAACACATTGTATCCACACAGGAAGAATTTTGGCTGCATTGGTTCCATCAAGTGGTAAACGAGCTGTTGACACTGTTGTGGCTGGTATTTTACATGATGTGGTTGACGACACTTGCCAAAGTCTGCGGGACATTGAGGCAGAGTTTGGGGATGATGTGGTCAAGTTGGTAGCCAGTGTTTCAAGGTTAAGCTATATTAATCAGCTATTACGCAGAAATCGGAGGGTAAGTGTAAACCAGGGTGTCCTTGGCCAAGAAGAGGCAAGTAATTTACGAGTGATGCTTTTGGGAATGGTTGATGATCCACGTGTTGTGCTCATCAAGCTTGCAGATCGTCTTCACAACATGAGAACAATTTATGCCCTGCCATTGCAAAAAGCTCAAGCTGTTGCAGAGGAGACCTTAATCATTTGGTGTTCACTTGCTTCAAGATTGGGTCTGTGGGCATTGAAAGCTGAACTGGAAGATTTATGCTTTGCTGTTCTGCAGCCTCAAATATTTCAAAAGATGCGAGCTGATCTTGCTTCCATGTGGAGTCCTACTAGCAGAACAGGAAACCCGAGAAGATTATCAATAAAAGGCAACTTGATACATTTGGACGAGAACAGTTCAACTGCTTTCTGCAATGGATCCTTGACATTCAATGAGGATGTAAATAGGAAGGATCTTTTGGAAGCTGTAGTCCCATTTGATATATTGTTGGATCGGAGAAAACGGGCTAACTATCTCAGTAGTATTGGGAATAATCTAGAGACATGCAAAAAACCAAAGGTTGTTCAAGAGGCTGGGCTAGCTTTGGCAACAATGGTAATTTGCGAGGAAGCACTTGAGCGAGAAATGATTATATCATCTTCTTATGTTCCAGGAATGGAAATTACATTATCAAGCCGATTAAAAAGCCTCTATAGTTTATACAGCAAGATGAAACGAAAGGATGTAAGCATTGATAAAGTATATGATGCACGTGCATTAAGAGTAGTTGTGGGAGACAAGAATGGAACTTTACACGGTCCTGCAGTTCGGTGTTGTTATAGTCTTCTTGACATTGTACACAGGCTTTGGACTCCAATAGATGGTGAATTTGATGATTACATCATTAATCCAAAGCCTAGTGGCTATCAGTCCTTGCACACTGCAGTCCAAGGTCCTGACAACTCACCTTTAGAAGTACAAATAAGGACACAGAGGATGCATGAGTGTGCTGAACATGGACTTGCTGCACATTGGCTTTACAAGGAAACTGGGAATCCTTTTTTATCCATAGACAGCATGGATGAACCTGAAACTGAAGCATCCTCCTATTTCTCCAAAAATCTAGAGGAAGGAAATTCTTCAGATATTTTATCAAGTAAATATAAGTCATTGAAGGCTGGACATCCAGTCCTCAGAGTAGAAGGAAGTCACTTACTTGCTGCGGTTATCATCAGTGTAGAGAATGATGAAAGAGAATTGCTAGTTGCTGTGAGCTTTGGGCTAGCAGCTTCTGAAGCAGTAGCTGACAGAAGATCTTTCCAGATTAAGCGATGGGAAGCTTATGCACGACTTTACAAAAAGGTGTCTGATGAATGGTGGTTTGAACCAGGGCATGGGGATTGGTTTACTTGTCTAGAGAAGTACACACTGTGTCGAGATGCAAGACCAATTTGGGCGCCTACTCCCAACATTCATCCAGGTTATCAATTTTACTGA

>Glyma.11g012000.3 sequence-type=CDS polypeptide=Glyma.11g012000.3.p locus=Glyma.11g012000 id=Glyma.11g012000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTGGATGGAGTAGATGTTACTGGCTACCCTATATTTGACGATGCAAAGGTACAGAAGGCTATAGCTTTTGCAAGGAAAGCACACCGTGGCCAAATGCGGAAGACAGGAGACCCTTATTTAACACATTGTATCCACACAGGAAGAATTTTGGCTGCATTGGTTCCATCAAGTGGTAAACGAGCTGTTGACACTGTTGTGGCTGGTATTTTACATGATGTGGTTGACGACACTTGCCAAAGTCTGCGGGACATTGAGGCAGAGTTTGGGGATGATGTGGTCAAGTTGGTAGCCAGTGTTTCAAGGTTAAGCTATATTAATCAGCTATTACGCAGAAATCGGAGGGTAAGTGTAAACCAGGGTGTCCTTGGCCAAGAAGAGGCAAGTAATTTACGAGTGATGCTTTTGGGAATGGTTGATGATCCACGTGTTGTGCTCATCAAGCTTGCAGATCGTCTTCACAACATGAGAACAATTTATGCCCTGCCATTGCAAAAAGCTCAAGCTGTTGCAGAGGAGACCTTAATCATTTGGTGTTCACTTGCTTCAAGATTGGGTCTGTGGGCATTGAAAGCTGAACTGGAAGATTTATGCTTTGCTGTTCTGCAGCCTCAAATATTTCAAAAGATGCGAGCTGATCTTGCTTCCATGTGGAGTCCTACTAGCAGAACAGGAAACCCGAGAAGATTATCAATAAAAGGCAACTTGATACATTTGGACGAGAACAGTTCAACTGCTTTCTGCAATGGATCCTTGACATTCAATGAGGATGTAAATAGGAAGGATCTTTTGGAAGCTGTAGTCCCATTTGATATATTGTTGGATCGGAGAAAACGGGCTAACTATCTCAGTAGTATTGGGAATAATCTAGAGACATGCAAAAAACCAAAGGTTGTTCAAGAGGCTGGGCTAGCTTTGGCAACAATGGTAATTTGCGAGGAAGCACTTGAGCGAGAAATGATTATATCATCTTCTTATGTTCCAGGAATGGAAATTACATTATCAAGCCGATTAAAAAGCCTCTATAGTTTATACAGCAAGATGAAACGAAAGGATGTAAGCATTGATAAAGTATATGATGCACGTGCATTAAGAGTAGTTGTGGGAGACAAGAATGGAACTTTACACGGTCCTGCAGTTCGGTGTTGTTATAGTCTTCTTGACATTGTACACAGGCTTTGGACTCCAATAGATGGTGAATTTGATGATTACATCATTAATCCAAAGCCTAGTGGCTATCAGTCCTTGCACACTGCAGTCCAAGGTCCTGACAACTCACCTTTAGAAGTACAAATAAGGACACAGAGGATGCATGAGTGTGCTGAACATGGACTTGCTGCACATTGGCTTTACAAGGAAACTGGGAATCCTTTTTTATCCATAGACAGCATGGATGAACCTGAAACTGAAGCATCCTCCTATTTCTCCAAAAATCTAGAGGAAGGAAATTCTTCAGATATTTTATCAAGTAAATATAAGTCATTGAAGGCTGGACATCCAGTCCTCAGAGTAGAAGGAAGTCACTTACTTGCTGCGGTTATCATCAGTGTAGAGAATGATGAAAGAGAATTGCTAGTTGCTGTGAGCTTTGGGCTAGCAGCTTCTGAAGCAGTAGCTGACAGAAGATCTTTCCAGATTAAGCGATGGGAAGCTTATGCACGACTTTACAAAAAGGTGTCTGATGAATGGTGGTTTGAACCAGGGCATGGGGATTGGTTTACTTGTCTAGAGAAGTACACACTGTGTCGAGATGGTATGTATCATAAGCAAGACCAATTTGGGCGCCTACTCCCAACATTCATCCAGGTTATCAATTTTACTGAGCAAGAAAAATCTGAATATTGGGCTGTTGTATCTGCTGTGTTTGAGGGCAGGCAAGTGGACTGGATAACATCTCGGTCAAAATTTGACTTGGTTGCATCAACTTCTGTAGAAGCTGGCATCGATAACAAGGTGAACCTGTTGAGAACAATGCTTTCTTGGGAAGAGCAATTGCGCTCTGAAGTAAATTTCAAGCAAACAAAGCATGATGTAAAGCTTTATGATCTTCATGGTTCTCTTGGGGAGGTGGTAATTATATGTTGGCCTCATGGTGAAATTTTGAGGCTAAAGGCCGGTAGCACTGCTACTGATGCAGCTCAAAGAGTTGGTTTGGAGGGAAAGCTGGTTTTGATTAATGGACAGCTAGTACTGCCCAACACAAAACTCAAAGATGGCGATGTAGTTGAAGTAAGAATTTAA
Predicted protein sequences of Glyma.11g012000
>Glyma.11g012000.12.p sequence-type=predicted peptide transcript=Glyma.11g012000.12 locus=Glyma.11g012000 id=Glyma.11g012000.12.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLLATLYLTMQRQVQKAIAFARKAHRGQMRKTGDPYLTHCIHTGRILAALVPSSGKRAVDTVVAGILHDVVDDTCQSLRDIEAEFGDDVVKLVASVSRLSYINQLLRRNRRVSVNQGVLGQEEASNLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVAEETLIIWCSLASRLGLWALKAELEDLCFAVLQPQIFQKMRADLASMWSPTSRTGNPRRLSIKGNLIHLDENSSTAFCNGSLTFNEDVNRKDLLEAVVPFDILLDRRKRANYLSSIGNNLETCKKPKVVQEAGLALATMVICEEALEREMIISSSYVPGMEITLSSRLKSLYSLYSKMKRKDVSIDKVYDARALRVVVGDKNGTLHGPAVRCCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQSLHTAVQGPDNSPLEVQIRTQRMHECAEHGLAAHWLYKETGNPFLSIDSMDEPETEASSYFSKNLEEGNSSDILSSKYKSLKAGHPVLRVEGSHLLAAVIISVENDERELLVAVSFGLAASEAVADRRSFQIKRWEAYARLYKKVSDEWWFEPGHGDWFTCLEKYTLCRDGMYHKQDQFGRLLPTFIQVINFTEQEKSEYWAVVSAVFEGRQVDWITSRSKFDLVASTSVEAGIDNKVNLLRTMLSWEEQLRSEVNFKQTKHDVKLYDLHGSLGEVVIICWPHGEILRLKAGSTATDAAQRVGLEGKLVLINGQLVLPNTKLKDGDVVEVRI*

>Glyma.11g012000.13.p sequence-type=predicted peptide transcript=Glyma.11g012000.13 locus=Glyma.11g012000 id=Glyma.11g012000.13.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSMSVLSCQRSTMLAAQNKSPFLRRFRSFKPYRSRFRCLLDQIAAPTLLTSDNVIAAAKAASAHSAVSSAITQVAVTAFAIASGACLSTKVDFLWPKLQEQPGTVMLDGVDVTGYPIFDDAKVQKAIAFARKAHRGQMRKTGDPYLTHCIHTGRILAALVPSSGKRAVDTVVAGILHDVVDDTCQSLRDIEAEFGDDVVKLVASVSRLSYINQLLRRNRRVSVNQGVLGQEEASNLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVAEETLIIWCSLASRLGLWALKAELEDLCFAVLQPQIFQKMRADLASMWSPTSRTGNPRRLSIKGNLIHLDENSSTAFCNGSLTFNEDVNRKDLLEAVVPFDILLDRRKRANYLSSIGNNLETCKKPKVVQEAGLALATMVICEEALEREMIISSSYVPGMEITLSSRLKSLYSLYSKMKRKDVSIDKVYDARALRVVVGDKNGTLHGPAVRCCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQSLHTAVQGPDNSPLEVQIRTQRMHECAEHGLAAHWLYKETGNPFLSIDSMDEPETEASSYFSKNLEEGNSSDILSSKYKSLKAGHPVLRVEGSHLLAAVIISVENDERELLVAVSFGLAASEAVADRRSFQIKRWEAYARLYKKVSDEWWFEPGHGDWFTCLEKYTLCRDARPIWAPTPNIHPGYQFY*

>Glyma.11g012000.3.p sequence-type=predicted peptide transcript=Glyma.11g012000.3 locus=Glyma.11g012000 id=Glyma.11g012000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLDGVDVTGYPIFDDAKVQKAIAFARKAHRGQMRKTGDPYLTHCIHTGRILAALVPSSGKRAVDTVVAGILHDVVDDTCQSLRDIEAEFGDDVVKLVASVSRLSYINQLLRRNRRVSVNQGVLGQEEASNLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVAEETLIIWCSLASRLGLWALKAELEDLCFAVLQPQIFQKMRADLASMWSPTSRTGNPRRLSIKGNLIHLDENSSTAFCNGSLTFNEDVNRKDLLEAVVPFDILLDRRKRANYLSSIGNNLETCKKPKVVQEAGLALATMVICEEALEREMIISSSYVPGMEITLSSRLKSLYSLYSKMKRKDVSIDKVYDARALRVVVGDKNGTLHGPAVRCCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQSLHTAVQGPDNSPLEVQIRTQRMHECAEHGLAAHWLYKETGNPFLSIDSMDEPETEASSYFSKNLEEGNSSDILSSKYKSLKAGHPVLRVEGSHLLAAVIISVENDERELLVAVSFGLAASEAVADRRSFQIKRWEAYARLYKKVSDEWWFEPGHGDWFTCLEKYTLCRDGMYHKQDQFGRLLPTFIQVINFTEQEKSEYWAVVSAVFEGRQVDWITSRSKFDLVASTSVEAGIDNKVNLLRTMLSWEEQLRSEVNFKQTKHDVKLYDLHGSLGEVVIICWPHGEILRLKAGSTATDAAQRVGLEGKLVLINGQLVLPNTKLKDGDVVEVRI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo