Glyma.11G244100

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Report for Sequence Feature Glyma.11G244100

Feature Type:	gene_model
Chromosome:	Gm11
Start:	33781539
stop:	33789678
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.11G244100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G13120.1	AT	embryo defective 1745	JGI	N/A	IEA
GO:0006406	GO-bp	mRNA export from nucleus	EnsemblGenomes	N/A	IEA
GO:0006446	GO-bp	regulation of translational initiation	EnsemblGenomes	N/A	IEA
GO:0006449	GO-bp	regulation of translational termination	EnsemblGenomes	N/A	IEA
GO:0016973	GO-bp	poly(A)+ mRNA export from nucleus	EnsemblGenomes	N/A	IEA
GO:0016973	GO-bp	poly(A)+ mRNA export from nucleus	JGI	N/A	IEA
GO:0005643	GO-cc	nuclear pore	EnsemblGenomes	N/A	IEA
GO:0005643	GO-cc	nuclear pore	JGI	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0044614	GO-cc	nuclear pore cytoplasmic filaments	EnsemblGenomes	N/A	IEA
GO:0000822	GO-mf	inositol hexakisphosphate binding	EnsemblGenomes	N/A	IEA
GO:0005543	GO-mf	phospholipid binding	EnsemblGenomes	N/A	IEA
GO:0031369	GO-mf	translation initiation factor binding	EnsemblGenomes	N/A	IEA
KOG2412	KOG	Nuclear-export-signal (NES)-containing protein/polyadenylated-RNA export factor	JGI	N/A	IEA
PTHR12960	Panther	GLE-1-RELATED	JGI	N/A	IEA
PF07817	PFAM	GLE1-like protein	JGI	N/A	IEA

Expression Patterns of Glyma.11G244100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.11G244100 not represented in the dataset	Glyma.11G244100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.11G244100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.11g244100	Wm82.a4.v1	ISS	As supplied by JGI
Glyma11g37710	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.11G244100

Limit To All Plant Sequences

>Glyma.11g244100.2 sequence-type=transcript locus=Glyma.11g244100 ID=Glyma.11g244100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTAAAAAAAAATGTagacgaagagagaagagagaagagtagagggagagcaagaAGGGGTTTGGGGTTCTTGGATGCAAACTGCAAAGCTCAAAAGCGACGTCGTTTATTACGTCCAACTGAAGCTCCCATAGCCGGAGTCCCTCTGCTTTCGGCCAACCTCAAAGCATCGAACAATGGGAGCTGTCAAATTGAATCTTCGTTGTTCTTCGCAACGAGTCGATGGCGTTGCCGCTGAACCCGAACCTGATTGGACCTTCGACGATCTTGTTTCGGAACTCAACGCTTTGGAGACTAAGCTCGCCACTAATGCTTCTTCTTCCACCCAACGTTCTTCACCTCTCGATAAATCAATATCGAAGTGTGGGAAAGAAATCCAGAGAGGTAGGGCTTTCGTGTTGCGTGCCGACGAGTTTGACATGGAGGACTCAGAGAGCGACGATGATGATCATGTTGACAGGGCTTTGGTAGTAACTGACAGTGGCAAACGGTTCACCTGTGATGAACTTTATCTGAGTGTCAGTGATGATGATTCTGACATTGCCTCTGGTTTTGAAGTGAGACCCTACTTGATGGATGAATTGGGAGAGGTCGAAGGTGCCTTGTTGGAGTTGACACATGAACATCAGCTTAGGGTTAAGGATGAAATAAGGAACAAGATCTCGGCATTGGAGACAGCTCTGGTGAATGAAACTCAGAATTCTACTTCTTCCTTTCTTCGGGTTGAGAAATATAAAGAAACAAGGCTGGACTTGGATAAAAAGTTTGACACTCAATATCAGCGTCGGATTGCAGAAGCACTTGATAATCACTTGACAGCTGTTCAACGGGACCGTGAACTTAGATCACAAATAGAAGAAAGGAAAATAAGAAGTGATGCAGCTTATGAAGAGGCCAAGAGAAAGGTTGCTTTTGAAAAGCAGCAGCAAGAAAAGGCTAAAGCTGAAGCAGAGGCCAAACTTAGAGCTGAGGAAGCAAAACGAGAAGCTGAGAGCAAAGCAGCAATGGAGGCCAAGAAACAGGCAGCAATTGAAGCTGAAAAAAGCGCAGCAGTAGAAGCTGAAAGAAGAGCAGAAAAGGAAGCTACTGAAACTTCCAAAAGAGTTACTTCTGGAGGGACCCAACAAGCTACTGCCCATCCAACAGGTAATTTATATCGAGCTGCAGCAAATGCTTTGAATTTAGAACAGTGGAGACTGCAGAAACTGAAAGAGCTATGTGAGGGGAACCAAATGATAAGATCAAGTTATAATGAGGATTGTACCCGCCACGAGGGTCGCATTTCCCGGAATATAAGACAAATAAGGGGCATAAGTGACAATGTTAGGTCAAAAGCAAGTGAACTCACTAAACTTTTGAGTCATCCTCAATCTTTTCAATCAATCAGCATTGAGATATTTGCTAAAAAGGTTGTTGCATACTGTGCAAACCCCGCTAATGTGCCCTTTGCAAGTGCCTATGTCATTGTTCTTGTTACATCTCAGGTCCCACATGCTATGGATATTTTACTAGCTGAGCTTCACAGGGCTTGCATATATACTGTCCCAAAGCACCTGGTTTACAAGAAGTCTGCCTATCAATCAAAAGAGGCATACTTCAGAAGTATTGGCTATCGAGAAGATGATGAAAAGATGGAGAGTACGGAAGATTATTTAAAGCGGTTAGAATCATACATGAAGATGTATGGTGCACTGGTTCAGACTGAAATTACAAACTGTCAAAATTTTCACGGCTTGAAAGAAGGTTGGGCATGGCTTGCAAGGTTCTTGAATACACACCCAGCAAATCAATACACAGCTGTTTCGCTTAATGCATTCTTGCAAATGGCTGGATTTGCTCTCTATAACAGATATAAATCTCAATTCTTAAAGATGCTGAACGTCGTCTCTGAGAACTTTTTAGTTGATCTGAAATCACAGAATATACCAGAATTGGCGAGGACAGTTACGGAGATACAGACTTACATAGACGATAAGAAGTTCCTTCAAGAGCCAGAAGGAAGAAGCCTGCAGTCTGATTTGTTATCAACCAAGATACTTCAAGAGGCAGACAGATGGATACCGAAGCCTAGTTTTAATAATTATTATTGAAACTTGAATAATTTTATTGCTTATTTTTTTGGGTAGAAAAAAGTTCAGGGAGATCGGCGATTGTTTTCATTTTAAGGTCTTTCACAAGCCTCACAGTTTACACAAACTAGTTGAGGCAGCTTTCATTTTACTCCGAGGAGTATTGGAAACGATTATTTACAGTTTATTTAGACTTATTTTGAGATGTAATACACATACAGAAATTCATACAACATTTATATAACATCATTTTCTTTTATCT

Coding sequences of Glyma.11G244100

Limit To All Plant Sequences

>Glyma.11g244100.1 sequence-type=CDS polypeptide=Glyma.11g244100.1.p locus=Glyma.11g244100 ID=Glyma.11g244100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAGCTGTCAAATTGAATCTTCGTTGTTCTTCGCAACGAGTCGATGGCGTTGCCGCTGAACCCGAACCTGATTGGACCTTCGACGATCTTGTTTCGGAACTCAACGCTTTGGAGACTAAGCTCGCCACTAATGCTTCTTCTTCCACCCAACGTTCTTCACCTCTCGATAAATCAATATCGAAGTGTGGGAAAGAAATCCAGAGAGGTAGGGCTTTCGTGTTGCGTGCCGACGAGTTTGACATGGAGGACTCAGAGAGCGACGATGATGATCATGTTGACAGGGCTTTGGTAGTAACTGACAGTGGCAAACGGTTCACCTGTGATGAACTTTATCTGAGTGTCAGTGATGATGATTCTGACATTGCCTCTGGTTTTGAAGTGAGACCCTACTTGATGGATGAATTGGGAGAGGTCGAAGGTGCCTTGTTGGAGTTGACACATGAACATCAGCTTAGGGTTAAGGATGAAATAAGGAACAAGATCTCGGCATTGGAGACAGCTCTGGTGAATGAAACTCAGAATTCTACTTCTTCCTTTCTTCGGGTTGAGAAATATAAAGAAACAAGGCTGGACTTGGATAAAAAGTTTGACACTCAATATCAGCGTCGGATTGCAGAAGCACTTGATAATCACTTGACAGCTGTTCAACGGGACCGTGAACTTAGATCACAAATAGAAGAAAGGAAAATAAGAAGTGATGCAGCTTATGAAGAGGCCAAGAGAAAGGTTGCTTTTGAAAAGCAGCAGCAAGAAAAGGCTAAAGCTGAAGCAGAGGCCAAACTTAGAGCTGAGGAAGCAAAACGAGAAGCTGAGAGCAAAGCAGCAATGGAGGCCAAGAAACAGGCAGCAATTGAAGCTGAAAAAAGCGCAGCAGTAGAAGCTGAAAGAAGAGCAGAAAAGGAAGCTACTGAAACTTCCAAAAGAGTTACTTCTGGAGGGACCCAACAAGCTACTGCCCATCCAACAGGTACTGCATCAAGCCTATCCAATGCTGAAACCAAGGAATCTGGTAATTTATATCGAGCTGCAGCAAATGCTTTGAATTTAGAACAGTGGAGACTGCAGAAACTGAAAGAGCTATGTGAGGGGAACCAAATGATAAGATCAAGTTATAATGAGGATTGTACCCGCCACGAGGGTCGCATTTCCCGGAATATAAGACAAATAAGGGGCATAAGTGACAATGTTAGGTCAAAAGCAAGTGAACTCACTAAACTTTTGAGTCATCCTCAATCTTTTCAATCAATCAGCATTGAGATATTTGCTAAAAAGGTTGTTGCATACTGTGCAAACCCCGCTAATGTGCCCTTTGCAAGTGCCTATGTCATTGTTCTTGTTACATCTCAGGTCCCACATGCTATGGATATTTTACTAGCTGAGCTTCACAGGGCTTGCATATATACTGTCCCAAAGCACCTGGTTTACAAGAAGTCTGCCTATCAATCAAAAGAGGCATACTTCAGAAGTATTGGCTATCGAGAAGATGATGAAAAGATGGAGAGTACGGAAGATTATTTAAAGCGGTTAGAATCATACATGAAGATGTATGGTGCACTGGTTCAGACTGAAATTACAAACTGTCAAAATTTTCACGGCTTGAAAGAAGGTTGGGCATGGCTTGCAAGGTTCTTGAATACACACCCAGCAAATCAATACACAGCTGTTTCGCTTAATGCATTCTTGCAAATGGCTGGATTTGCTCTCTATAACAGATATAAATCTCAATTCTTAAAGATGCTGAACGTCGTCTCTGAGAACTTTTTAGTTGATCTGAAATCACAGAATATACCAGAATTGGCGAGGACAGTTACGGAGATACAGACTTACATAGACGATAAGAAGTTCCTTCAAGAGCCAGAAGGAAGAAGCCTGCAGTCTGATTTGTTATCAACCAAGATACTTCAAGAGGCAGACAGATGGATACCGAAGCCTAGTTTTAATAATTATTATTGA

>Glyma.11g244100.2 sequence-type=CDS polypeptide=Glyma.11g244100.2.p locus=Glyma.11g244100 ID=Glyma.11g244100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAGCTGTCAAATTGAATCTTCGTTGTTCTTCGCAACGAGTCGATGGCGTTGCCGCTGAACCCGAACCTGATTGGACCTTCGACGATCTTGTTTCGGAACTCAACGCTTTGGAGACTAAGCTCGCCACTAATGCTTCTTCTTCCACCCAACGTTCTTCACCTCTCGATAAATCAATATCGAAGTGTGGGAAAGAAATCCAGAGAGGTAGGGCTTTCGTGTTGCGTGCCGACGAGTTTGACATGGAGGACTCAGAGAGCGACGATGATGATCATGTTGACAGGGCTTTGGTAGTAACTGACAGTGGCAAACGGTTCACCTGTGATGAACTTTATCTGAGTGTCAGTGATGATGATTCTGACATTGCCTCTGGTTTTGAAGTGAGACCCTACTTGATGGATGAATTGGGAGAGGTCGAAGGTGCCTTGTTGGAGTTGACACATGAACATCAGCTTAGGGTTAAGGATGAAATAAGGAACAAGATCTCGGCATTGGAGACAGCTCTGGTGAATGAAACTCAGAATTCTACTTCTTCCTTTCTTCGGGTTGAGAAATATAAAGAAACAAGGCTGGACTTGGATAAAAAGTTTGACACTCAATATCAGCGTCGGATTGCAGAAGCACTTGATAATCACTTGACAGCTGTTCAACGGGACCGTGAACTTAGATCACAAATAGAAGAAAGGAAAATAAGAAGTGATGCAGCTTATGAAGAGGCCAAGAGAAAGGTTGCTTTTGAAAAGCAGCAGCAAGAAAAGGCTAAAGCTGAAGCAGAGGCCAAACTTAGAGCTGAGGAAGCAAAACGAGAAGCTGAGAGCAAAGCAGCAATGGAGGCCAAGAAACAGGCAGCAATTGAAGCTGAAAAAAGCGCAGCAGTAGAAGCTGAAAGAAGAGCAGAAAAGGAAGCTACTGAAACTTCCAAAAGAGTTACTTCTGGAGGGACCCAACAAGCTACTGCCCATCCAACAGGTAATTTATATCGAGCTGCAGCAAATGCTTTGAATTTAGAACAGTGGAGACTGCAGAAACTGAAAGAGCTATGTGAGGGGAACCAAATGATAAGATCAAGTTATAATGAGGATTGTACCCGCCACGAGGGTCGCATTTCCCGGAATATAAGACAAATAAGGGGCATAAGTGACAATGTTAGGTCAAAAGCAAGTGAACTCACTAAACTTTTGAGTCATCCTCAATCTTTTCAATCAATCAGCATTGAGATATTTGCTAAAAAGGTTGTTGCATACTGTGCAAACCCCGCTAATGTGCCCTTTGCAAGTGCCTATGTCATTGTTCTTGTTACATCTCAGGTCCCACATGCTATGGATATTTTACTAGCTGAGCTTCACAGGGCTTGCATATATACTGTCCCAAAGCACCTGGTTTACAAGAAGTCTGCCTATCAATCAAAAGAGGCATACTTCAGAAGTATTGGCTATCGAGAAGATGATGAAAAGATGGAGAGTACGGAAGATTATTTAAAGCGGTTAGAATCATACATGAAGATGTATGGTGCACTGGTTCAGACTGAAATTACAAACTGTCAAAATTTTCACGGCTTGAAAGAAGGTTGGGCATGGCTTGCAAGGTTCTTGAATACACACCCAGCAAATCAATACACAGCTGTTTCGCTTAATGCATTCTTGCAAATGGCTGGATTTGCTCTCTATAACAGATATAAATCTCAATTCTTAAAGATGCTGAACGTCGTCTCTGAGAACTTTTTAGTTGATCTGAAATCACAGAATATACCAGAATTGGCGAGGACAGTTACGGAGATACAGACTTACATAGACGATAAGAAGTTCCTTCAAGAGCCAGAAGGAAGAAGCCTGCAGTCTGATTTGTTATCAACCAAGATACTTCAAGAGGCAGACAGATGGATACCGAAGCCTAGTTTTAATAATTATTATTGA

Predicted protein sequences of Glyma.11G244100

Limit To All Plant Sequences

>Glyma.11g244100.1.p sequence-type=predicted peptide transcript=Glyma.11g244100.1 locus=Glyma.11g244100 ID=Glyma.11g244100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGAVKLNLRCSSQRVDGVAAEPEPDWTFDDLVSELNALETKLATNASSSTQRSSPLDKSISKCGKEIQRGRAFVLRADEFDMEDSESDDDDHVDRALVVTDSGKRFTCDELYLSVSDDDSDIASGFEVRPYLMDELGEVEGALLELTHEHQLRVKDEIRNKISALETALVNETQNSTSSFLRVEKYKETRLDLDKKFDTQYQRRIAEALDNHLTAVQRDRELRSQIEERKIRSDAAYEEAKRKVAFEKQQQEKAKAEAEAKLRAEEAKREAESKAAMEAKKQAAIEAEKSAAVEAERRAEKEATETSKRVTSGGTQQATAHPTGTASSLSNAETKESGNLYRAAANALNLEQWRLQKLKELCEGNQMIRSSYNEDCTRHEGRISRNIRQIRGISDNVRSKASELTKLLSHPQSFQSISIEIFAKKVVAYCANPANVPFASAYVIVLVTSQVPHAMDILLAELHRACIYTVPKHLVYKKSAYQSKEAYFRSIGYREDDEKMESTEDYLKRLESYMKMYGALVQTEITNCQNFHGLKEGWAWLARFLNTHPANQYTAVSLNAFLQMAGFALYNRYKSQFLKMLNVVSENFLVDLKSQNIPELARTVTEIQTYIDDKKFLQEPEGRSLQSDLLSTKILQEADRWIPKPSFNNYY*

>Glyma.11g244100.2.p sequence-type=predicted peptide transcript=Glyma.11g244100.2 locus=Glyma.11g244100 ID=Glyma.11g244100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGAVKLNLRCSSQRVDGVAAEPEPDWTFDDLVSELNALETKLATNASSSTQRSSPLDKSISKCGKEIQRGRAFVLRADEFDMEDSESDDDDHVDRALVVTDSGKRFTCDELYLSVSDDDSDIASGFEVRPYLMDELGEVEGALLELTHEHQLRVKDEIRNKISALETALVNETQNSTSSFLRVEKYKETRLDLDKKFDTQYQRRIAEALDNHLTAVQRDRELRSQIEERKIRSDAAYEEAKRKVAFEKQQQEKAKAEAEAKLRAEEAKREAESKAAMEAKKQAAIEAEKSAAVEAERRAEKEATETSKRVTSGGTQQATAHPTGNLYRAAANALNLEQWRLQKLKELCEGNQMIRSSYNEDCTRHEGRISRNIRQIRGISDNVRSKASELTKLLSHPQSFQSISIEIFAKKVVAYCANPANVPFASAYVIVLVTSQVPHAMDILLAELHRACIYTVPKHLVYKKSAYQSKEAYFRSIGYREDDEKMESTEDYLKRLESYMKMYGALVQTEITNCQNFHGLKEGWAWLARFLNTHPANQYTAVSLNAFLQMAGFALYNRYKSQFLKMLNVVSENFLVDLKSQNIPELARTVTEIQTYIDDKKFLQEPEGRSLQSDLLSTKILQEADRWIPKPSFNNYY*

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