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Report for Sequence Feature Glyma.11G209500

Feature Type:gene_model
Chromosome:Gm11
Start:30131080
stop:30134126
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.11G209500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G27550.1AT centroradialis JGI N/AIEA
GO:0009910GO-bp negative regulation of flower development EnsemblGenomesN/AIEA
GO:1903506GO-bp regulation of nucleic acid-templated transcription EnsemblGenomesN/AIEA
GO:0003712GO-mf transcription cofactor activity EnsemblGenomesN/AIEA
KOG3346 KOG Phosphatidylethanolamine binding protein JGI N/AIEA
PTHR11362Panther PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN JGI N/AIEA
PF01161PFAM Phosphatidylethanolamine-binding protein JGI N/AIEA

Proteins Associated with Glyma.11G209500
LocusGene SymbolProtein Name
CEN1 protein SELF-PRUNING-like

Paralogs of Glyma.11G209500
ParalogEvidenceComments
Glyma.10g071400 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.11G209500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma13g22030 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.11G209500
>Glyma.11g209500.1 sequence-type=primary primary transcript locus=Glyma.11g209500 ID=Glyma.11g209500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAAAGATGTGGACAGATCCTCTATTTATTGGGAGAGTTATAGGAGATGTTCTTGACTCTTTCACCCCAACCATAAAAATGACCGTAACTTACAAGAAGCAAGTCTACAATGGGCACGAGTTCTTCCCTTCCACAATTACCACAAGGCCGAAGGTTGAGATTGGTGGAGGAGATATGAGGTCATTCTATACACTGATTATGACTGACCCGGATGTCCCTGGTCCTAGTGATCCTTACCTGAGAGAGCATTTGCACTGGATGGTGACAGACATTCCAGGCACAACAAATGCCTCATTTGGGAATGTGTTGGTGAGCTATGAGATGCCAAAGCCTAACATAGGGATACACAGGTATGTGTTTGTCCTGTTTAAGCAAAAACGTAGGCAGTGTGTAACTCGTCCACCTTCTTCAAGGGATCACTTCAGCACTCGCAAATTCTCAGCTGAGAATGACCTTGGCCTCCCTGTCGCTTCTGTCTACTTCAATGCACAGAGAGAAACTGCTGCAAGAAGACGCTAG
Coding sequences of Glyma.11G209500
>Glyma.11g209500.1 sequence-type=CDS polypeptide=Glyma.11g209500.1.p locus=Glyma.11g209500 ID=Glyma.11g209500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAAAGATGTGGACAGATCCTCTATTTATTGGGAGAGTTATAGGAGATGTTCTTGACTCTTTCACCCCAACCATAAAAATGACCGTAACTTACAAGAAGCAAGTCTACAATGGGCACGAGTTCTTCCCTTCCACAATTACCACAAGGCCGAAGGTTGAGATTGGTGGAGGAGATATGAGGTCATTCTATACACTGATTATGACTGACCCGGATGTCCCTGGTCCTAGTGATCCTTACCTGAGAGAGCATTTGCACTGGATGGTGACAGACATTCCAGGCACAACAAATGCCTCATTTGGGAATGTGTTGGTGAGCTATGAGATGCCAAAGCCTAACATAGGGATACACAGGTATGTGTTTGTCCTGTTTAAGCAAAAACGTAGGCAGTGTGTAACTCGTCCACCTTCTTCAAGGGATCACTTCAGCACTCGCAAATTCTCAGCTGAGAATGACCTTGGCCTCCCTGTCGCTTCTGTCTACTTCAATGCACAGAGAGAAACTGCTGCAAGAAGACGCTAG
Predicted protein sequences of Glyma.11G209500
>Glyma.11g209500.1.p sequence-type=predicted peptide transcript=Glyma.11g209500.1 locus=Glyma.11g209500 ID=Glyma.11g209500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAKMWTDPLFIGRVIGDVLDSFTPTIKMTVTYKKQVYNGHEFFPSTITTRPKVEIGGGDMRSFYTLIMTDPDVPGPSDPYLREHLHWMVTDIPGTTNASFGNVLVSYEMPKPNIGIHRYVFVLFKQKRRQCVTRPPSSRDHFSTRKFSAENDLGLPVASVYFNAQRETAARRR*






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