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Report for Sequence Feature Glyma.11G167600

Feature Type:gene_model
Chromosome:Gm11
Start:16569877
stop:16572457
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.11G167600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G42380.2AT Basic-leucine zipper (bZIP) transcription factor family protein JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated EnsemblGenomesN/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding EnsemblGenomesN/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003700GO-mf DNA binding transcription factor activity EnsemblGenomesN/AIEA
GO:0003700GO-mf sequence-specific DNA binding transcription factor activity JGI N/AIEA
GO:0043565GO-mf sequence-specific DNA binding JGI N/AIEA
PF07716PFAM Basic region leucine zipper JGI N/AIEA

Proteins Associated with Glyma.11G167600
LocusGene SymbolProtein Name
bZIP89 Basic leucine zipper transcription factor-like protein gene 89

Expression Patterns of Glyma.11G167600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.11G167600 not represented in the dataset
Glyma.11G167600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Transcripts of Glyma.11G167600
>Glyma.11g167600.2 sequence-type=transcript locus=Glyma.11g167600 ID=Glyma.11g167600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAACCCTAAAGAAAATAACAAGGTAGAGAACCATCATACGGTGAATGCAATTTTGAGTCCTACTTTTGTCTTTTCTGCTACAAAACTAGCAGACCAATTCGGATATGCAGAAGGTAATCCTACTCCAGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTTTCTAACCGATTTGCTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCGATTTGGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACAACTACAAGATTTGTACGAAAATAAGAGGCAGACTCAGATAGTAGAAGAAGAAATAATGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCAAAGATGGTGAAATTGAGAAGGACAAAGGTGAAGTGATTAGGGAGAGGGAACTCCAAGTGATAGAGCAACAAGAGGAATTGCAAGCACAGTTGGTTAACTTGAATATTGGTCCACAGGAGTGTCCAATTATCCAACCTCAATTTATTATGCAAACTCATATCTAGCAAATGAAGTGGATCCACTTGAGTCATACATACCACCAGAGCCAAGGGAGATGCGGTTTCCTACTGTGCCAAATTTGCATGATTTGAACTTGAGTCTACCCAACAACATGGGATCAGTGGATCAGACAAATCTTACAAGGGAAACCGCTCCGAACCACAAACCTTAATTAGGCGTCACTTTACTTTAGATTTCCCAGTTTTATGATTGCTTAATATGACTTGAAATTTGGAAGGTTGGTTTTTGTTTCTAGTGTGTTTCTATATATATAGTTGTTGTCTCTAGAAGTTGTAGTGGTTCACA
Coding sequences of Glyma.11G167600
>Glyma.11g167600.1 sequence-type=CDS polypeptide=Glyma.11g167600.1.p locus=Glyma.11g167600 ID=Glyma.11g167600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAACCCTAAAGAAAATAACAAGGTAGAGAACCATCATACGGTGAATGCAATTTTGAGTCCTACTTTTGTCTTTTCTGCTACAAAACTAGCAGACCAATTCGGATATGCAGAAGGTAATCCTACTCCAGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTTTCTAACCGATTTGCTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCGATTTGGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACAACTACAAGATTTGTACGAAAATAAGAGGCAGACTCAGATAGTAGAAGAAGAAATAATGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCAAAGATGGTGAAATTGAGAAGGACAAAGGTGAAGTGATTAGGGAGAGGGAACTCCAAGTGATAGAGCAACAAGAGGAATTGCAAGCACAGTTGGTTAACTTGAATATTGGTCCACAGGAGTGTCCAATTATCCAACCTCAATTTATTATGCAAACTCATATCTAG

>Glyma.11g167600.2 sequence-type=CDS polypeptide=Glyma.11g167600.2.p locus=Glyma.11g167600 ID=Glyma.11g167600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAACCCTAAAGAAAATAACAAGGTAGAGAACCATCATACGGTGAATGCAATTTTGAGTCCTACTTTTGTCTTTTCTGCTACAAAACTAGCAGACCAATTCGGATATGCAGAAGGTAATCCTACTCCAGAACAACAAATATTGGATCCTAAATTAAGAAGAATATTTTCTAACCGATTTGCTGCCCAAAGATCAAGGGAGAAGAAGAAAAATCATTTAGCCGATTTGGAGATTCAAAAGAAAACTTTTGAGAATGAAATAGCCCAAAAACAACAACTACAAGATTTGTACGAAAATAAGAGGCAGACTCAGATAGTAGAAGAAGAAATAATGTACCAGGAAATTGATATTCTTAAGAATTATTCAATGTTCAAAGATGGTGAAATTGAGAAGGACAAAGGTGAAGTGATTAGGGAGAGGGAACTCCAAGTGATAGAGCAACAAGAGGAATTGCAAGCACAGTTGGTTAACTTGAATATTGGTCCACAGGAGTGTCCAATTATCCAACCTCAATTTATTATGCAAACTCATATCTAG
Predicted protein sequences of Glyma.11G167600
>Glyma.11g167600.1.p sequence-type=predicted peptide transcript=Glyma.11g167600.1 locus=Glyma.11g167600 ID=Glyma.11g167600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MENPKENNKVENHHTVNAILSPTFVFSATKLADQFGYAEGNPTPEQQILDPKLRRIFSNRFAAQRSREKKKNHLADLEIQKKTFENEIAQKQQLQDLYENKRQTQIVEEEIMYQEIDILKNYSMFKDGEIEKDKGEVIRERELQVIEQQEELQAQLVNLNIGPQECPIIQPQFIMQTHI*

>Glyma.11g167600.2.p sequence-type=predicted peptide transcript=Glyma.11g167600.2 locus=Glyma.11g167600 ID=Glyma.11g167600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MENPKENNKVENHHTVNAILSPTFVFSATKLADQFGYAEGNPTPEQQILDPKLRRIFSNRFAAQRSREKKKNHLADLEIQKKTFENEIAQKQQLQDLYENKRQTQIVEEEIMYQEIDILKNYSMFKDGEIEKDKGEVIRERELQVIEQQEELQAQLVNLNIGPQECPIIQPQFIMQTHI*






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