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Report for Sequence Feature Glyma.10g264600

Feature Type:gene_model
Chromosome:Gm10
Start:48877329
stop:48882553
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.10g264600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G71070.1AT Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0008375GO-mf acetylglucosaminyltransferase activity EnsemblGenomesN/AIEA
GO:0008375GO-mf acetylglucosaminyltransferase activity JGI N/AIEA
KOG0799 KOG Branching enzyme JGI N/AIEA
PTHR19297Panther GLYCOSYLTRANSFERASE 14 FAMILY MEMBER JGI N/AIEA
PTHR19297:SF2Panther JGI N/AIEA
PF02485PFAM Core-2/I-Branching enzyme JGI N/AIEA
GN7V-64861SoyCyc9-rxn glucuronosyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.10g264600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g264600 not represented in the dataset
Glyma.10g264600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.10g264600
ParalogEvidenceComments
Glyma.20g125800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.10g264600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g41085 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g264600
>Glyma.10g264600.1 sequence-type=CDS polypeptide=Glyma.10g264600.1.p locus=Glyma.10g264600 ID=Glyma.10g264600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAGCTGAGAGGAAATGGCTTTTCACTCTATTGAGTGCAGCATTCCTATCTCTCATGCTTCTTTTGATGTCCTCTTTCTCTGCCTTTAGCACCCCAAAGGTTTTCCCTTCCCTTGTTCAGCATGGTTCTCACTACCCTCCAGCTTTTGCATACTTTATCTCTGGTGGAAACCAGGACAAGGACCGGATCTTGCGGTTGTTGCTGGCAGTTTACCATCCTAGGAATAGGTACCTCCTCCATCTTGGGAGGGATGCCAGGGATGAGGAGAGGCAGGCCCTGGCTGCTGCCGTGAGGGCGGTGCCGGTCATTCGCGCTTTCGGGAACGTTGATGTGGTTGGCAAGGCTGATTATGTCACCTACTTGGGATCTTCCAATGTTGCCATTATTCTTCGGGCTGCCGCCATTATGCTCAAATTGGATAGTGGGTGGAATTGGTTCATTACCTTGAGTGCACGGGATTATCCTCTCATCACTCAGGATGATTTGTCCCATGTTTTCTCTTCTGTTAGGAGAGACCTCAATTTCATTGATCACACTGGTGACCTTGGATGGAAAGAGAGCGATAGGTTCCAGCCTATTGTAGTTGACCCGGGACTATATTTAGCAAGGAAAAGTCAAATTTTTCAAGCTACACAAAAGAGGCCAACGCCTGACGCGTTCAAACTCTTTACAGGTTCACCATGGCTCATCTTGAGCCGGCCCTTTCTGGAGTTCTGCATTTTTGGTTGGGACAATTTACCTCGGACCCTACTGATGTATTTTACAAATGTGAAGTTATCTCAAGAAGGCTACTTTCACTCAGTCGTTTGCAATGCGCCAGAATTTAAGAACACAACAGTAAATGGTGACTTACGATATATGATCTGGGACAATCCTCCAAAGATGGAGCCTCACTTCCTTAACGCCTCTGTTTACAATCAGATGGCAGAAAGTGGGGCTGCTTTTGCAAGACAGTTTCAACTTAATAATCCTGTGCTGGACATGATTGATGAAAGGATCCTCCAACGCGGTCGCCATCGAGTTACTCCAGGGGCATGGTGCACTGGGCGGAGGAGCTGGTGGGTGGATCCATGCTCCCAATGGGGTGATGTCAATACTGTGAAACCAGGTCCTCGGGCTAAGAAGCTTGAAGGGTCTGTGTCTAACCTTCTTGATGACTGGAACTCACAGACCAATCAGTGCAAATGA
Predicted protein sequences of Glyma.10g264600
>Glyma.10g264600.1.p sequence-type=predicted peptide transcript=Glyma.10g264600.1 locus=Glyma.10g264600 ID=Glyma.10g264600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGAERKWLFTLLSAAFLSLMLLLMSSFSAFSTPKVFPSLVQHGSHYPPAFAYFISGGNQDKDRILRLLLAVYHPRNRYLLHLGRDARDEERQALAAAVRAVPVIRAFGNVDVVGKADYVTYLGSSNVAIILRAAAIMLKLDSGWNWFITLSARDYPLITQDDLSHVFSSVRRDLNFIDHTGDLGWKESDRFQPIVVDPGLYLARKSQIFQATQKRPTPDAFKLFTGSPWLILSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVVCNAPEFKNTTVNGDLRYMIWDNPPKMEPHFLNASVYNQMAESGAAFARQFQLNNPVLDMIDERILQRGRHRVTPGAWCTGRRSWWVDPCSQWGDVNTVKPGPRAKKLEGSVSNLLDDWNSQTNQCK*






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