Glyma.10g264300

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Report for Sequence Feature Glyma.10g264300

Feature Type:	gene_model
Chromosome:	Gm10
Start:	48858818
stop:	48862498
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.10g264300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G04780.1	AT	mediator 21	JGI	N/A	IEA
GO:0006351	GO-bp	transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0006355	GO-bp	regulation of transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0006357	GO-bp	regulation of transcription by RNA polymerase II	EnsemblGenomes	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0016592	GO-cc	mediator complex	EnsemblGenomes	N/A	IEA
KOG1510	KOG	RNA polymerase II holoenzyme and mediator subcomplex, subunit SURB7/SRB7	JGI	N/A	IEA
PF11221	PFAM	Subunit 21 of Mediator complex	JGI	N/A	IEA

Proteins Associated with Glyma.10g264300

Locus	Gene Symbol	Protein Name
	MED21-1	Mediator Complex 21 gene 1

Expression Patterns of Glyma.10g264300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g264300 not represented in the dataset	Glyma.10g264300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.10g264300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma10g41060	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.10g264300

Limit To All Plant Sequences

>Glyma.10g264300.2 sequence-type=transcript locus=Glyma.10g264300 ID=Glyma.10g264300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAAATATTTTTTAAAAAAGTTTAAGAATTAAATTAAATGAATTGAAAGTTTAAGGATtaaaaataaaaataagattgatgaaaatataagactaaaaaCATATTTTTTTCCATTTGGAAGGAACGCACTCACGAGCAAGGGAAGCGACTAGTGAGCGAGTAGAGTTTCTGCTTCTACTTTACAAGATTACAATTTACAAGTTACATTTCAGCAAGTCAAAATTTCCTCCAGAAAGTTGCTCGTGTAATGGATATAATCTCTCAGTTACAAGAACAAGTTAATTTGATTGCACATTTGGCTTTTAATACAGTTGGGACATTGCAAAGGGATGCCCCTCCTAATCGGCTGTCGCCAAATTATCCTGAACCACCTGCGCATGCTACAGAGGATGGGTCAAATTTTTCAGAACAGCCAAAGCTGATGAGTACTACTTTGGTGAAGGCTGCTAAGCAGTTTGATGCATTGGTTGCGGCGCTTCCAATATCCGAGTCAGGTGAAGAAGCACAGCTTAAGAGGATTTCAGAACTACAAGCTGAAAATGATGCAATAGGCCTAGAACTTCAGAAACAGTTGGAAGCTGCAGAGAAGGAATTGAATCAGGTTCAGGAGCTGTTTAGGCAAGCATCAGATAATTGTTTGAACTTGAAGAAACCAGATGACAGTTAGCTATTTGTGTTCCAGGAAAGCTCAGATGAATTTTGCCACATGTATCTCAACTTGACAAAAAGCAGGGACAGCTGCAGGAGGATTTTCCTTTTCTCCTTTTAAGTCTTGATTACCTGAAATAGTTGTATTCTTTCGTATGTTGTGACTTTTGCCTGACACGTGATGTTTTGCAGAAATTGATCATCAGTTGAGATACTGGTAATTATCTTTCTTTGCTCCCGAGGGAAAGGCATATCGGTGTTTATATTAACCATCTTCCTTCACGCAGTCCGAAAATTTTGTAGTGATAGTTTTTTAGGGAAGCTCGTGAAAATTGTGCAATTTTAAGTGTCATTTTATTTACTAGTGAAGTCA

>Glyma.10g264300.3 sequence-type=transcript locus=Glyma.10g264300 ID=Glyma.10g264300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAAATATTTTTTAAAAAAGTTTAAGAATTAAATTAAATGAATTGAAAGTTTAAGGATtaaaaataaaaataagattgatgaaaatataagactaaaaaCATATTTTTTTCCATTTGGAAGGAACGCACTCACGAGCAAGGGAAGCGACTAGTGAGCGAGTAGAGTTTCTGCTTCTACTTTACAAGATTACAATTTACAAGTTACATTTCAGCAAGTCAAAATTTCCTCCAGAAAGTTGCTCGTGTAATGGATATAATCTCTCAGTTACAAGAACAAGTTAATTTGATTGCACATTTGGCTTTTAATACAGTTGGGACATTGCAAAGGGATGCCCCTCCTAATCGGCTGTCGCCAAATTATCCTGAACCACCTGCGCATGCTACAGAGGATGGGTCAAATTTTTCAGAACAGCCAAAGCTGATGAGTACTACTTTGGTGAAGGCTGCTAAGCAGTTTGATGCATTGGTTGCGGCGCTTCCAATATCCGAGTCAGGTGAAGAAGCACAGCTTAAGAGGATTTCAGAACTACAAGTATGGAAATCACAGCTCACTGAATGTTCTTTATATGTGATTGACTGGTGTTCTTAATAACAAGTAATCTAATTGTAGCAAACAGTGTTTATGTTTTTACATTGTTTCTGCATTTTTCCTTCCAGGCTGAAAATGATGCAATAGGCCTAGAACTTCAGAAACAGTTGGAAGCTGCAGAGAAGGAATTGAATCAGGTTCAGGAGCTGTTTAGGCAAGCATCAGATAATTGTTTGAACTTGAAGAAACCAGATGACAGTTAGCTATTTGTGTTCCAGGAAAGCTCAGATGAATTTTGCCACATGTATCTCAACTTGACAAAAAGCAGGGACAGCTGCAGGAGGATTTTCCTTTTCTCCTTTTAAGTCTTGATTACCTGAAATAGTTGTATTCTTTCGTATGTTGTGACTTTTGCCTGACACGTGATGTTTTGCAGAAATTGATCATCAGTTGAGATACTGGTAATTATCTTTCTTTGCTCCCGAGGGAAAGGCATATCGGTGTTTATATTAACCATCTTCCTTCACGCAGTCCGAAAATTTTGTAGTGATAGTTTTTTAGGGAAGCTCGTGAAAATTGTGCAATTTTAAGTGTCATTTTATTTACTAGTGAAGTCA

Coding sequences of Glyma.10g264300

Limit To All Plant Sequences

>Glyma.10g264300.1 sequence-type=CDS polypeptide=Glyma.10g264300.1.p locus=Glyma.10g264300 ID=Glyma.10g264300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATATAATCTCTCAGTTACAAGAACAAGTTAATTTGATTGCACATTTGGCTTTTAATACAGTTGGGACATTGCAAAGGGATGCCCCTCCTAATCGGCTGTCGCCAAATTATCCTGAACCACCTGCGCATGCTACAGAGGATGGGTCAAATTTTTCAGAACAGCCAAAGCTGATGAGTACTACTTTGGTGAAGGCTGCTAAGCAGTTTGATGCATTGGTTGCGGCGCTTCCAATATCCGAGTCAGGTGAAGAAGCACAGCTTAAGAGGATTTCAGAACTACAAGCTGAAAATGATGCAATAGGCCTAGAACTTCAGAAACAGTTGGAAGCTGCAGAGAAGGAATTGAATCAGGTTCAGGAGCTGTTTAGGCAAGCATCAGATAATTGTTTGAACTTGAAGAAACCAGATGACAGTTAG

>Glyma.10g264300.2 sequence-type=CDS polypeptide=Glyma.10g264300.2.p locus=Glyma.10g264300 ID=Glyma.10g264300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATATAATCTCTCAGTTACAAGAACAAGTTAATTTGATTGCACATTTGGCTTTTAATACAGTTGGGACATTGCAAAGGGATGCCCCTCCTAATCGGCTGTCGCCAAATTATCCTGAACCACCTGCGCATGCTACAGAGGATGGGTCAAATTTTTCAGAACAGCCAAAGCTGATGAGTACTACTTTGGTGAAGGCTGCTAAGCAGTTTGATGCATTGGTTGCGGCGCTTCCAATATCCGAGTCAGGTGAAGAAGCACAGCTTAAGAGGATTTCAGAACTACAAGCTGAAAATGATGCAATAGGCCTAGAACTTCAGAAACAGTTGGAAGCTGCAGAGAAGGAATTGAATCAGGTTCAGGAGCTGTTTAGGCAAGCATCAGATAATTGTTTGAACTTGAAGAAACCAGATGACAGTTAG

>Glyma.10g264300.3 sequence-type=CDS polypeptide=Glyma.10g264300.3.p locus=Glyma.10g264300 ID=Glyma.10g264300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATATAATCTCTCAGTTACAAGAACAAGTTAATTTGATTGCACATTTGGCTTTTAATACAGTTGGGACATTGCAAAGGGATGCCCCTCCTAATCGGCTGTCGCCAAATTATCCTGAACCACCTGCGCATGCTACAGAGGATGGGTCAAATTTTTCAGAACAGCCAAAGCTGATGAGTACTACTTTGGTGAAGGCTGCTAAGCAGTTTGATGCATTGGTTGCGGCGCTTCCAATATCCGAGTCAGGTGAAGAAGCACAGCTTAAGAGGATTTCAGAACTACAAGTATGGAAATCACAGCTCACTGAATGTTCTTTATATGTGATTGACTGGTGTTCTTAA

Predicted protein sequences of Glyma.10g264300

Limit To All Plant Sequences

>Glyma.10g264300.1.p sequence-type=predicted peptide transcript=Glyma.10g264300.1 locus=Glyma.10g264300 ID=Glyma.10g264300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDIISQLQEQVNLIAHLAFNTVGTLQRDAPPNRLSPNYPEPPAHATEDGSNFSEQPKLMSTTLVKAAKQFDALVAALPISESGEEAQLKRISELQAENDAIGLELQKQLEAAEKELNQVQELFRQASDNCLNLKKPDDS*

>Glyma.10g264300.2.p sequence-type=predicted peptide transcript=Glyma.10g264300.2 locus=Glyma.10g264300 ID=Glyma.10g264300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDIISQLQEQVNLIAHLAFNTVGTLQRDAPPNRLSPNYPEPPAHATEDGSNFSEQPKLMSTTLVKAAKQFDALVAALPISESGEEAQLKRISELQAENDAIGLELQKQLEAAEKELNQVQELFRQASDNCLNLKKPDDS*

>Glyma.10g264300.3.p sequence-type=predicted peptide transcript=Glyma.10g264300.3 locus=Glyma.10g264300 ID=Glyma.10g264300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDIISQLQEQVNLIAHLAFNTVGTLQRDAPPNRLSPNYPEPPAHATEDGSNFSEQPKLMSTTLVKAAKQFDALVAALPISESGEEAQLKRISELQVWKSQLTECSLYVIDWCS*

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