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Report for Sequence Feature Glyma.10g257700

Feature Type:gene_model
Chromosome:Gm10
Start:48408033
stop:48409478
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.10g257700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G19590.1AT Transducin/WD40 repeat-like superfamily protein JGI N/AIEA
GO:0007094GO-bp mitotic spindle assembly checkpoint EnsemblGenomesN/AIEA
GO:0000776GO-cc kinetochore EnsemblGenomesN/AIEA
GO:0009524GO-cc phragmoplast EnsemblGenomesN/AIEA
GO:0033597GO-cc mitotic checkpoint complex EnsemblGenomesN/AIEA
GO:1990298GO-cc bub1-bub3 complex EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0043130GO-mf ubiquitin binding EnsemblGenomesN/AIEA
PTHR10971Panther MRNA EXPORT FACTOR AND BUB3 JGI N/AIEA
PTHR10971:SF5Panther MITOTIC CHECKPOINT PROTEIN BUB3 JGI N/AIEA
PF00400PFAM WD domain, G-beta repeat JGI N/AIEA

Expression Patterns of Glyma.10g257700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g257700 not represented in the dataset
Glyma.10g257700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.10g257700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g40381 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.10g257700
>Glyma.10g257700.2 sequence-type=transcript locus=Glyma.10g257700 ID=Glyma.10g257700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGACAAGGTACGTATCATATCATATGCTCCTCTTTCTCAGTTTTCATTTACTCAGGATATGCACTTAGTTCTGTTGAAGGGCGGGTTGTGATGGAATTCTTTGACCTCTCAGAGGCTAGCCAAGCAAAAATATATGCTTTTAAGTGTCACAGAAAATCTGAGGCTGGAAGGGACATAGTCTATCCTGTGAATGCAATTGCATTCCACCCCATATATGGAACGTTTGCCACAGGAGTTTGTGACGGGTGTGTCAACGTGTGGGACGGAAACAATTAGAAGAGGCTATACCAGTACTCAGAATATCCTACCAGCATTGCTGCACTGTCGTTTAGCAGAGATGGACGCCTTTTGGGCTTTGGTTGTTGCATCAAGTTACACATTCGAAGAAGGGCCTAAAGCAGGAACTACAGCGGAAGCTCTCTCTCTCTCACTGTTCAGTGTATATCTCTGGAATACGTGCTAGTTGTATGTAACTTGCTCTTTCCTTATTTCTTATACAGCGAGGAACAAGATGCTATCTACGTACGCAATGTGAACGAGATTGAGGTCAAGCCATAGCCCAAAGTCTATCCCAATCCTCCAGCGCGATTCCCAATGATGGCCTTTTCGAAAATAGGGATTTCTTCGTTTTTTGTTTCTACTGTTTCACTTCCCTCTCGTGAAGGCCAAAAACATGTGAACTATTGTTGTGAAGCACTAGCTTATTTTGTAGTTACAAATTGATAGTCCAGATTTCCTTCTAATTGTACACTACGTGCAAGTATGTCTATTGTAAAGTATAAATGAAA
Coding sequences of Glyma.10g257700
>Glyma.10g257700.1 sequence-type=CDS polypeptide=Glyma.10g257700.1.p locus=Glyma.10g257700 ID=Glyma.10g257700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGACAAGGTACGTATCATATCATATGCTCCTCTTTCTCAGTTTTCATTTACTCAGGATATGCACTTAGTTCTGTTGAAGGGCGGGTTGTGATGGAATTCTTTGACCTCTCAGAGGCTAGCCAAGCAAAAATATATGCTTTTAAGTGTCACAGAAAATCTGAGGCTGGAAGGGACATAGTCTATCCTGTGAATGCAATTGCATTCCACCCCATATATGGAACGTTTGCCACAGGAGTTTGTGACGGGTGTGTCAACTACTCAGAATATCCTACCAGCATTGCTGCACTGTCGTTTAGCAGAGATGGACGCCTTTTGGGCTTTGGTTGTTGCATCAACGAGGAACAAGATGCTATCTACGTACGCAATGTGAACGAGATTGAGGTCAAGCCATAG

>Glyma.10g257700.2 sequence-type=CDS polypeptide=Glyma.10g257700.2.p locus=Glyma.10g257700 ID=Glyma.10g257700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGACAAGGTACGTATCATATCATATGCTCCTCTTTCTCAGTTTTCATTTACTCAGGATATGCACTTAGTTCTGTTGAAGGGCGGGTTGTGATGGAATTCTTTGACCTCTCAGAGGCTAGCCAAGCAAAAATATATGCTTTTAAGTGTCACAGAAAATCTGAGGCTGGAAGGGACATAGTCTATCCTGTGAATGCAATTGCATTCCACCCCATATATGGAACGTTTGCCACAGGAGTTTGTGACGGGTGTGTCAACGTGTGGGACGGAAACAATTAG
Predicted protein sequences of Glyma.10g257700
>Glyma.10g257700.1.p sequence-type=predicted peptide transcript=Glyma.10g257700.1 locus=Glyma.10g257700 ID=Glyma.10g257700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRQGTYHIICSSFSVFIYSGYALSSVEGRVVMEFFDLSEASQAKIYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGVCDGCVNYSEYPTSIAALSFSRDGRLLGFGCCINEEQDAIYVRNVNEIEVKP*

>Glyma.10g257700.2.p sequence-type=predicted peptide transcript=Glyma.10g257700.2 locus=Glyma.10g257700 ID=Glyma.10g257700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRQGTYHIICSSFSVFIYSGYALSSVEGRVVMEFFDLSEASQAKIYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGVCDGCVNVWDGNN*






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