SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.10g249700

Feature Type:gene_model
Chromosome:Gm10
Start:47860134
stop:47868923
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.10g249700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G05970.1AT ATLACS6,LACS6 JGI N/AIEA
6.2.1.3EC long-chain-fatty-acid-CoA ligase JGI N/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
K01897KEGG Exosome JGI N/AIEA
PTHR24096PantherFam LONG-CHAIN-FATTY-ACID--COA LIGASE JGI N/AIEA
PF00501Pfam AMP-binding enzyme JGI N/AIEA
PF13193Pfam AMP-binding enzyme C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.10g249700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g39540 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g249700
>Glyma.10g249700.1 sequence-type=CDS polypeptide=Glyma.10g249700.1.p locus=Glyma.10g249700 id=Glyma.10g249700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCACACGCCTGCTGCGCAACGTCGTCTCAAAGCCATTCACGCCCACCTCACCGCCACCGCCGATGAATCTCCCTCCCACCTCCGATCCAATCCCACCGCCGGCGAGTTCTTCTCCGAACAAGGGTATAGTGTTGTACTCCCAGAGAAATTACAAACAGGAAAGTGGAACGTTTACAGATCTGTACGATCTCCTCTGCAGCTGGTGACCAAGTTTCCTAATCATCCTGAAATTGGTACCCTGCACGATAATTTTGTGCGCTCAGTTGACACCTTTCGAGACTACAAATATCTGGGAACACGTGTCCGTGTTGATGGAACTGTTGGGGAGTACAAATGGATAACATATGGAGAAGCAGGTACGGCCCGGTCAGCAATAGGTTCTGGTTTGATTTATCATGGAATCGAAAAGGGCTCCAGTATTGGGTTGTATTTTATTAACAGACCTGAGTGGCTCATTGTTGATCATGCTTGCTCTTCATACTCATTTGTATCAGTGCCTCTGTATGATACTCTTGGTCCTGATGCTGTTAAGTATATTGTTAGTCATGCTGCTGTGCAAGTTATATTTTGTGTACCTCAAACATTAAATTTATTGCTGAGCTACTTGTCTGATATTCCAACTGTACGTCTAATTGTGGTAGTTGGAGGTATGGATGATCAAATTCCATTAGTTCCATCATCAACTGGAGTTCAGGTTATTACATATTCAAAGCTACTTAATCAGGGACGCAGCAACCTTCAGCTCTTCTGTCCACCAAAACCTGATGACATTGCAACCATTTGCTATACAAGTGGTACAACTGGAACCCCAAAAGGTGCTATCTTGACCCATGGAAACTTTATTGCAAGTGTTGCTGGGAGTACTAGGGATCAGAAATTCGGCCCTTCTGATGTTTATATATCCTATCTCCCTTTGGCACACATTTATGAGCGAGCAAACCAGGTCATGACAGTACATTTTGGCATTGCAGTGGGATTCTACCAGGGGGATAGTATGAAATTAATGGATGACATAGCTGCTCTAAGACCTACTGTCTTTTGTAGTGTTCCTCGGCTATATAACAGAATATATGCTGGTATAATTAATGCTGTTAAAACATCTGGCGGTCTGAAGGAGAGACTATTTAATGCTGCCTACAATGCTAAAAGGCAGGCTTTATTGCATGGGAAGAACCCATCTCCTATGTGGGACAGATTAGTTTTCAACAAGATAAAAGAGAAGCTTGGAGGACGAGTTCGGTTTATGGCATCAGGTGCCTCACCTTTATCACCTGATATCATGGAATTTTTAAAGATTTGCTTTGGTTGTCGGGTGACTGAAGGATATGGAATGACAGAGAGTACTTGTATTATAAGTTTCATTGATGAGGGTGACAAACTTGGTGGTCATGTTGGCTCTCCTAATCTAGCCTGTGAGATAAAACTTGTGGATGTTCCAGAAATGAACTATACATCTGATGATCAGCCCAATCCCCGTGGTGAAATTTGTGTCAGGGGTCCCATTGTTTTTCGGGGCTATCACAAAGATGAAGCCCAGACGAGAGATGTCATTGATGAAGATGGATGGCTACATACTGGAGATATTGGGACGTGGTTACCTGGTGGTCGTCTCAAAATTATTGATAGGAAGAAGAATATCTTTAAGTTGGCACAAGGCGAGTACATTGCTCCTGAGAAGATTGAAAATGTATACGCCAAATGCAAATTTGTGGCGCAGTGCTTTGTATATGGTGATAGCCTAAATTCTTCTTTGGTAGCTGTTGTCTCGGTGGATCATGATAACTTGAAAGCATGGGCTGCTTCAGAAGGAATAATGTATAATGATTTGGCACAACTTTGCAATGATTCAAAAGTAAGGGCAGCTGTCTTGGCTGAGATGGATGCTGCTGGACGAGACGCTCAGCTTAGAGGTTTTGAATTCGTAAAAGCTGTCACTTTAGTGCTCGAACCATTTACGTTGGAAAATGGTCTGTTGACTCCGACATTCAAGGTTAAGAGGCCTCAAGCGAAGGAATATTTTGCAAAAGCAATATCTGATATGTACAATGAGCTCTCAAGAACTGATGTTTCTCAGAAAACGTTGTGA

>Glyma.10g249700.2 sequence-type=CDS polypeptide=Glyma.10g249700.2.p locus=Glyma.10g249700 id=Glyma.10g249700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACTATATTCATAATACTGACATTTGTTCAACCTTCCTCACAACTTAGGAATTTTTTCTATCCATTGACTATTGAATATTTTCATATGCCTTGCTTATTAGTATTATTACATTACCTTCTTGTAATTTCTTTGTTTGATATCATTAGCTTTGATCTTTACTTCTGGGCAGAACAAGGGTATAGTGTTGTACTCCCAGAGAAATTACAAACAGGAAAGTGGAACGTTTACAGATCTGTACGATCTCCTCTGCAGCTGGTGACCAAGTTTCCTAATCATCCTGAAATTGGTACCCTGCACGATAATTTTGTGCGCTCAGTTGACACCTTTCGAGACTACAAATATCTGGGAACACGTGTCCGTGTTGATGGAACTGTTGGGGAGTACAAATGGATAACATATGGAGAAGCAGGTACGGCCCGGTCAGCAATAGGTTCTGGTTTGATTTATCATGGAATCGAAAAGGGCTCCAGTATTGGGTTGTATTTTATTAACAGACCTGAGTGGCTCATTGTTGATCATGCTTGCTCTTCATACTCATTTGTATCAGTGCCTCTGTATGATACTCTTGGTCCTGATGCTGTTAAGTATATTGTTAGTCATGCTGCTGTGCAAGTTATATTTTGTGTACCTCAAACATTAAATTTATTGCTGAGCTACTTGTCTGATATTCCAACTGTACGTCTAATTGTGGTAGTTGGAGGTATGGATGATCAAATTCCATTAGTTCCATCATCAACTGGAGTTCAGGTTATTACATATTCAAAGCTACTTAATCAGGGACGCAGCAACCTTCAGCTCTTCTGTCCACCAAAACCTGATGACATTGCAACCATTTGCTATACAAGTGGTACAACTGGAACCCCAAAAGGTGCTATCTTGACCCATGGAAACTTTATTGCAAGTGTTGCTGGGAGTACTAGGGATCAGAAATTCGGCCCTTCTGATGTTTATATATCCTATCTCCCTTTGGCACACATTTATGAGCGAGCAAACCAGGTCATGACAGTACATTTTGGCATTGCAGTGGGATTCTACCAGGGGGATAGTATGAAATTAATGGATGACATAGCTGCTCTAAGACCTACTGTCTTTTGTAGTGTTCCTCGGCTATATAACAGAATATATGCTGGTATAATTAATGCTGTTAAAACATCTGGCGGTCTGAAGGAGAGACTATTTAATGCTGCCTACAATGCTAAAAGGCAGGCTTTATTGCATGGGAAGAACCCATCTCCTATGTGGGACAGATTAGTTTTCAACAAGATAAAAGAGAAGCTTGGAGGACGAGTTCGGTTTATGGCATCAGGTGCCTCACCTTTATCACCTGATATCATGGAATTTTTAAAGATTTGCTTTGGTTGTCGGGTGACTGAAGGATATGGAATGACAGAGAGTACTTGTATTATAAGTTTCATTGATGAGGGTGACAAACTTGGTGGTCATGTTGGCTCTCCTAATCTAGCCTGTGAGATAAAACTTGTGGATGTTCCAGAAATGAACTATACATCTGATGATCAGCCCAATCCCCGTGGTGAAATTTGTGTCAGGGGTCCCATTGTTTTTCGGGGCTATCACAAAGATGAAGCCCAGACGAGAGATGTCATTGATGAAGATGGATGGCTACATACTGGAGATATTGGGACGTGGTTACCTGGTGGTCGTCTCAAAATTATTGATAGGAAGAAGAATATCTTTAAGTTGGCACAAGGCGAGTACATTGCTCCTGAGAAGATTGAAAATGTATACGCCAAATGCAAATTTGTGGCGCAGTGCTTTGTATATGGTGATAGCCTAAATTCTTCTTTGGTAGCTGTTGTCTCGGTGGATCATGATAACTTGAAAGCATGGGCTGCTTCAGAAGGAATAATGTATAATGATTTGGCACAACTTTGCAATGATTCAAAAGTAAGGGCAGCTGTCTTGGCTGAGATGGATGCTGCTGGACGAGACGCTCAGCTTAGAGGTTTTGAATTCGTAAAAGCTGTCACTTTAGTGCTCGAACCATTTACGTTGGAAAATGGTCTGTTGACTCCGACATTCAAGGTTAAGAGGCCTCAAGCGAAGGAATATTTTGCAAAAGCAATATCTGATATGTACAATGAGCTCTCAAGAACTGATGTTTCTCAGAAAACGTTGTGA
Predicted protein sequences of Glyma.10g249700
>Glyma.10g249700.1.p sequence-type=predicted peptide transcript=Glyma.10g249700.1 locus=Glyma.10g249700 id=Glyma.10g249700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDHTPAAQRRLKAIHAHLTATADESPSHLRSNPTAGEFFSEQGYSVVLPEKLQTGKWNVYRSVRSPLQLVTKFPNHPEIGTLHDNFVRSVDTFRDYKYLGTRVRVDGTVGEYKWITYGEAGTARSAIGSGLIYHGIEKGSSIGLYFINRPEWLIVDHACSSYSFVSVPLYDTLGPDAVKYIVSHAAVQVIFCVPQTLNLLLSYLSDIPTVRLIVVVGGMDDQIPLVPSSTGVQVITYSKLLNQGRSNLQLFCPPKPDDIATICYTSGTTGTPKGAILTHGNFIASVAGSTRDQKFGPSDVYISYLPLAHIYERANQVMTVHFGIAVGFYQGDSMKLMDDIAALRPTVFCSVPRLYNRIYAGIINAVKTSGGLKERLFNAAYNAKRQALLHGKNPSPMWDRLVFNKIKEKLGGRVRFMASGASPLSPDIMEFLKICFGCRVTEGYGMTESTCIISFIDEGDKLGGHVGSPNLACEIKLVDVPEMNYTSDDQPNPRGEICVRGPIVFRGYHKDEAQTRDVIDEDGWLHTGDIGTWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGDSLNSSLVAVVSVDHDNLKAWAASEGIMYNDLAQLCNDSKVRAAVLAEMDAAGRDAQLRGFEFVKAVTLVLEPFTLENGLLTPTFKVKRPQAKEYFAKAISDMYNELSRTDVSQKTL*

>Glyma.10g249700.2.p sequence-type=predicted peptide transcript=Glyma.10g249700.2 locus=Glyma.10g249700 id=Glyma.10g249700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTIFIILTFVQPSSQLRNFFYPLTIEYFHMPCLLVLLHYLLVISLFDIISFDLYFWAEQGYSVVLPEKLQTGKWNVYRSVRSPLQLVTKFPNHPEIGTLHDNFVRSVDTFRDYKYLGTRVRVDGTVGEYKWITYGEAGTARSAIGSGLIYHGIEKGSSIGLYFINRPEWLIVDHACSSYSFVSVPLYDTLGPDAVKYIVSHAAVQVIFCVPQTLNLLLSYLSDIPTVRLIVVVGGMDDQIPLVPSSTGVQVITYSKLLNQGRSNLQLFCPPKPDDIATICYTSGTTGTPKGAILTHGNFIASVAGSTRDQKFGPSDVYISYLPLAHIYERANQVMTVHFGIAVGFYQGDSMKLMDDIAALRPTVFCSVPRLYNRIYAGIINAVKTSGGLKERLFNAAYNAKRQALLHGKNPSPMWDRLVFNKIKEKLGGRVRFMASGASPLSPDIMEFLKICFGCRVTEGYGMTESTCIISFIDEGDKLGGHVGSPNLACEIKLVDVPEMNYTSDDQPNPRGEICVRGPIVFRGYHKDEAQTRDVIDEDGWLHTGDIGTWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGDSLNSSLVAVVSVDHDNLKAWAASEGIMYNDLAQLCNDSKVRAAVLAEMDAAGRDAQLRGFEFVKAVTLVLEPFTLENGLLTPTFKVKRPQAKEYFAKAISDMYNELSRTDVSQKTL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo