Glyma.10g247800

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Report for Sequence Feature Glyma.10g247800

Feature Type:	gene_model
Chromosome:	Gm10
Start:	47614613
stop:	47618795
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.10g247800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G36280.1	AT	L-Aspartase-like family protein	JGI	N/A	IEA
GO:0006188	GO-bp	IMP biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0006188	GO-bp	IMP biosynthetic process	JGI	N/A	IEA
GO:0003824	GO-mf	catalytic activity	EnsemblGenomes	N/A	IEA
GO:0004018	GO-mf	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	EnsemblGenomes	N/A	IEA
GO:0004018	GO-mf	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	JGI	N/A	IEA
KOG2700	KOG	Adenylosuccinate lyase	JGI	N/A	IEA
PTHR11444	Panther	ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE	JGI	N/A	IEA
PTHR11444:SF2	Panther	ADENYLOSUCCINATE LYASE	JGI	N/A	IEA
PF00206	PFAM	Lyase	JGI	N/A	IEA
PF08328	PFAM	Adenylosuccinate lyase C-terminal	JGI	N/A	IEA
PWY-6124	SoyCyc9	inosine-5'-phosphate biosynthesis II	Plant Metabolic Network		ISS
PWY-7219	SoyCyc9	adenosine ribonucleotides de novo biosynthesis	Plant Metabolic Network		ISS
PWY-7229	SoyCyc9	superpathway of adenosine nucleotides de novo biosynthesis I	Plant Metabolic Network		ISS
PWY-841	SoyCyc9	superpathway of purine nucleotides de novo biosynthesis I	Plant Metabolic Network		ISS
GN7V-46458	SoyCyc9-rxn	adenylosuccinate lyase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.10g247800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g247800 not represented in the dataset	Glyma.10g247800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.10g247800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma10g39305	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.10g247800

Limit To All Plant Sequences

>Glyma.10g247800.2 sequence-type=transcript locus=Glyma.10g247800 ID=Glyma.10g247800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGTTCGTGGCACTCTCTAACGCTACCCAACTTGGGAGCTTCAACCCCCTTAGAACCAACCTTCAAAAGGTTGCTCTTGCAAAGCCATCCTCAGcactcacacacccacccacctctacccacAACATTTTTGGACCTCATTCCGCTGATTTTGAGCTCTCTGCTTTGACGGCTCTATCCCCATTGGATGGTCGTTATTGGGGAAAAGTTAAGGAACTGTCTCCTTTTCTGAGAGAATATGGCTTAATATGCTTTCGGATTAAATGGTTGCTGCAGCTGTCTCAGATTCCTGAAATTGTTGAGGTTCCCAGTTTCAGTGAAGGTGCTACAATATTTTTACAAGGCTTGATTGATGACTTTAGTGTTGATGATGCCTTGGAGGTTAAGAACATTGAGAGGGTCACAAATCATGATGTGCTTGAGTTTTTCCACTTTGCTTGCACATCTGAGGATATAAATAATCTTGCACATGCCTTGATGCTGAAGGAAACAATGAATTCTGTCATGGATAAAATAATCAAAGCTTTGTGTGACATATCTGAAGATAATGCTCATGTCCCGATGCTTTCTCGCACTCATGGACAGAATCAATGTATTATTGTGGGCTCTTTTGAACTCCTGTTATATGAAAGGTTGTTGAGAATATTGGGGAAATTTTCTGGTGCAGTTGGAAATTACAATGCACATGTTGTTTCATATCCTGAAGTTAACTGGCCTCACATTGCAGAACAGTTTGTACAATCTCTTGGATTAAGTTTTAATCCTTATGTTGCTCAGATTGAAACTCATGACTACATGGCAAAGCTTTTTCATTTGCTCATCCAGTTCAATAATATATTGATTGAATTTGATAGAGATGTATGGGGCTATATATCTTTGGGTTACTTTAACCAGACCACTAAGGCTGGGGAGGTTGGGTCTTCAACTATGCCTCACAAAGTGAATCCTATTGATTTTGAGAACAGCGAAGGTAATCTAGGTGTAGCTAATGGAGGAACACTACTGAACTTATCCTATTTGATTATTTCACTACTCTATTTGGCACTCACTCATTCAATGCATGCATTCTATTTGGCTGTTTCATTGCTTTGTTTCCATTCTCCCAAAATAGAGGTGCCACAAACTCATTTATAATGTATACTTTTTCTTTATGAGACTTATGGTTAAGTTGCTTTATCTATTTCTAGTTTAAGTTATTACATTGAATTGAATACTATACATTTATATGATATATTTCAAGTTATTTTTCATTGTCTTTGAATCTTATGATATTCAATACAAATTACGATTCAAGATTCCAAAATTAGCTTGACAATTCATGGTTTGAATCTTGATTTGATAACCTTGTAATCTATTGACCTTTTAGCATAATTTAGTGACAGTTATAGTCTAATTGTGATTAGCTCTTGGAAATAATTGTTTTTCTATATTCATTTTTTCTTTCCTGCAGAGGGACTTGACAGATTCAACTGTCTTAAGGAACATGGGTGTAGGCATAGGGCATTCTCTTCTTGCCTACAAAAGCACACTTCGAGAAATAGGGAAGCTTCAGGTTAATGAAGCTCGCTTGAGTGAAGACTTGAACCAGTGCTGGGAGGTGCTTGCTGAACCAATACAGACTGTTATGCGAAGATATGGTGTTTCCGAACCTTATGAGAAGTTAAAAGAACTAACCAGAGGGAGAGCAGTTACCCAAAAGAGCATAAGAGACTTCATTGAAGGCTTATATATTCCAGAAGAAGCAAAGATGAATCTGTTAAAGTTAACACCTGATACTTATGTTGGAGCAGCAGTTGAATTGGCTAGAACAGTGAAAAATGTCGTGAATACTGTGTATGGAAGAAAGATCTAGGAAACAAACAAGTGGTTGAAGCAGTTTTCTCGAGAACTATTGGCAAGACAATTTTGCATCCTCACCATCATTGACCAAATGGTCATTAATTGATATATGAACTTTTAAATAAGATGTTCCACTGAAACTTACAGAGAAAATAGAAATATCAAAATTGATAG

>Glyma.10g247800.3 sequence-type=transcript locus=Glyma.10g247800 ID=Glyma.10g247800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGTTCGTGGCACTCTCTAACGCTACCCAACTTGGGAGCTTCAACCCCCTTAGAACCAACCTTCAAAAGGTTGCTCTTGCAAAGCCATCCTCAGcactcacacacccacccacctctacccacAACATTTTTGGACCTCATTCCGCTGATTTTGAGCTCTCTGCTTTGACGGCTCTATCCCCATTGGATGGTCGTTATTGGGGAAAAGTTAAGGAACTGTCTCCTTTTCTGAGAGAATATGGCTTAATATGCTTTCGGATTAAATGGTTGCTGCAGCTGTCTCAGATTCCTGAAATTGTTGAGGTTCCCAGTTTCAGTGAAGGTGCTACAATATTTTTACAAGGCTTGATTGATGACTTTAGTGTTGATGATGCCTTGGAGGTTAAGAACATTGAGAGGGTCACAAATCATGATGTGCTTGAGTTTTTCCACTTTGCTTGCACATCTGAGGATATAAATAATCTTGCACATGCCTTGATGCTGAAGGAAACAATGAATTCTGTCATGGATAAAATAATCAAAGCTTTGTGTGACATATCTGAAGATAATGCTCATGTCCCGATGCTTTCTCGCACTCATGGACAGAATCAATGTATTATTGTGGGCTCTTTTGAACTCCTGTTATATGAAAGGTTGTTGAGAATATTGGGGAAATTTTCTGGTGCAGTTGGAAATTACAATGCACATGTTGTTTCATATCCTGAAGTTAACTGGCCTCACATTGCAGAACAGTTTGTACAATCTCTTGGATTAAGTTTTAATCCTTATGTTGCTCAGATTGAAACTCATGACTACATGGCAAAGCTTTTTCATTTGCTCATCCAGTTCAATAATATATTGATTGAATTTGATAGAGATGTATGGGGCTATATATCTTTGGGTTACTTTAACCAGACCACTAAGGCTGGGGAGGTTGGGTCTTCAACTATGCCTCACAAAGTGAATCCTATTGATTTTGAGAACAGCGAAGGTAATCTAGGTGTAGCTAATGGAGGTCTGTCTCATCTAAGCATGAAGTTGCCAATTTCGCATTGGCAGGCAAGGCCTACTTGAGTTTGATTTTTTTTTTTTTGGTATTATTATGGTCATTTTGGTATTGCTATTATTCTAAACTATGGTGCCAAGAGGATTTTACCAATATATCTTTTGGAAATTGGTTTGTGTAATTTTTTGTACACACATTGCAAATAATGTGCTATGGAAAGAGTTACCAAGCTATTGTAATCTATGGTACAATTTGGCTAGCTAGTGATTTGTATCATAA

Coding sequences of Glyma.10g247800

Limit To All Plant Sequences

>Glyma.10g247800.1 sequence-type=CDS polypeptide=Glyma.10g247800.1.p locus=Glyma.10g247800 ID=Glyma.10g247800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGTTCGTGGCACTCTCTAACGCTACCCAACTTGGGAGCTTCAACCCCCTTAGAACCAACCTTCAAAAGGTTGCTCTTGCAAAGCCATCCTCAGCACTCACACACCCACCCACCTCTACCCACAACATTTTTGGACCTCATTCCGCTGATTTTGAGCTCTCTGCTTTGACGGCTCTATCCCCATTGGATGGTCGTTATTGGGGAAAAGTTAAGGAACTGTCTCCTTTTCTGAGAGAATATGGCTTAATATGCTTTCGGATTAAATGGTTGCTGCAGCTGTCTCAGATTCCTGAAATTGTTGAGGTTCCCAGTTTCAGTGAAGGTGCTACAATATTTTTACAAGGCTTGATTGATGACTTTAGTGTTGATGATGCCTTGGAGGTTAAGAACATTGAGAGGGTCACAAATCATGATGTGCTTGAGTTTTTCCACTTTGCTTGCACATCTGAGGATATAAATAATCTTGCACATGCCTTGATGCTGAAGGAAACAATGAATTCTGTCATGGATAAAATAATCAAAGCTTTGTGTGACATATCTGAAGATAATGCTCATGTCCCGATGCTTTCTCGCACTCATGGACAGAATCAATGTATTATTGTGGGCTCTTTTGAACTCCTGTTATATGAAAGGTTGTTGAGAATATTGGGGAAATTTTCTGGTGCAGTTGGAAATTACAATGCACATGTTGTTTCATATCCTGAAGTTAACTGGCCTCACATTGCAGAACAGTTTGTACAATCTCTTGGATTAAGTTTTAATCCTTATGTTGCTCAGATTGAAACTCATGACTACATGGCAAAGCTTTTTCATTTGCTCATCCAGTTCAATAATATATTGATTGAATTTGATAGAGATGTATGGGGCTATATATCTTTGGGTTACTTTAACCAGACCACTAAGGCTGGGGAGGTTGGGTCTTCAACTATGCCTCACAAAGTGAATCCTATTGATTTTGAGAACAGCGAAGGTAATCTAGGTGTAGCTAATGGAGGAACACTACTGAACTTATCCTATTTGATTATTTCACTACTCTATTTGGCACTCACTCATTCAATGCATGCATTCTATTTGGCTGTTTCATTGCTTTGTTTCCATTCTCCCAAAATAGAGAGGGACTTGACAGATTCAACTGTCTTAAGGAACATGGGTGTAGGCATAGGGCATTCTCTTCTTGCCTACAAAAGCACACTTCGAGAAATAGGGAAGCTTCAGGTTAATGAAGCTCGCTTGAGTGAAGACTTGAACCAGTGCTGGGAGGTGCTTGCTGAACCAATACAGACTGTTATGCGAAGATATGGTGTTTCCGAACCTTATGAGAAGTTAAAAGAACTAACCAGAGGGAGAGCAGTTACCCAAAAGAGCATAAGAGACTTCATTGAAGGCTTATATATTCCAGAAGAAGCAAAGATGAATCTGTTAAAGTTAACACCTGATACTTATGTTGGAGCAGCAGTTGAATTGGCTAGAACAGTGAAAAATGTCGTGAATACTGTGTATGGAAGAAAGATCTAG

>Glyma.10g247800.2 sequence-type=CDS polypeptide=Glyma.10g247800.2.p locus=Glyma.10g247800 ID=Glyma.10g247800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGTTCGTGGCACTCTCTAACGCTACCCAACTTGGGAGCTTCAACCCCCTTAGAACCAACCTTCAAAAGGTTGCTCTTGCAAAGCCATCCTCAGCACTCACACACCCACCCACCTCTACCCACAACATTTTTGGACCTCATTCCGCTGATTTTGAGCTCTCTGCTTTGACGGCTCTATCCCCATTGGATGGTCGTTATTGGGGAAAAGTTAAGGAACTGTCTCCTTTTCTGAGAGAATATGGCTTAATATGCTTTCGGATTAAATGGTTGCTGCAGCTGTCTCAGATTCCTGAAATTGTTGAGGTTCCCAGTTTCAGTGAAGGTGCTACAATATTTTTACAAGGCTTGATTGATGACTTTAGTGTTGATGATGCCTTGGAGGTTAAGAACATTGAGAGGGTCACAAATCATGATGTGCTTGAGTTTTTCCACTTTGCTTGCACATCTGAGGATATAAATAATCTTGCACATGCCTTGATGCTGAAGGAAACAATGAATTCTGTCATGGATAAAATAATCAAAGCTTTGTGTGACATATCTGAAGATAATGCTCATGTCCCGATGCTTTCTCGCACTCATGGACAGAATCAATGTATTATTGTGGGCTCTTTTGAACTCCTGTTATATGAAAGGTTGTTGAGAATATTGGGGAAATTTTCTGGTGCAGTTGGAAATTACAATGCACATGTTGTTTCATATCCTGAAGTTAACTGGCCTCACATTGCAGAACAGTTTGTACAATCTCTTGGATTAAGTTTTAATCCTTATGTTGCTCAGATTGAAACTCATGACTACATGGCAAAGCTTTTTCATTTGCTCATCCAGTTCAATAATATATTGATTGAATTTGATAGAGATGTATGGGGCTATATATCTTTGGGTTACTTTAACCAGACCACTAAGGCTGGGGAGGTTGGGTCTTCAACTATGCCTCACAAAGTGAATCCTATTGATTTTGAGAACAGCGAAGGTAATCTAGGTGTAGCTAATGGAGGAACACTACTGAACTTATCCTATTTGATTATTTCACTACTCTATTTGGCACTCACTCATTCAATGCATGCATTCTATTTGGCTGTTTCATTGCTTTGTTTCCATTCTCCCAAAATAGAGGTGCCACAAACTCATTTATAA

>Glyma.10g247800.3 sequence-type=CDS polypeptide=Glyma.10g247800.3.p locus=Glyma.10g247800 ID=Glyma.10g247800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGTTCGTGGCACTCTCTAACGCTACCCAACTTGGGAGCTTCAACCCCCTTAGAACCAACCTTCAAAAGGTTGCTCTTGCAAAGCCATCCTCAGCACTCACACACCCACCCACCTCTACCCACAACATTTTTGGACCTCATTCCGCTGATTTTGAGCTCTCTGCTTTGACGGCTCTATCCCCATTGGATGGTCGTTATTGGGGAAAAGTTAAGGAACTGTCTCCTTTTCTGAGAGAATATGGCTTAATATGCTTTCGGATTAAATGGTTGCTGCAGCTGTCTCAGATTCCTGAAATTGTTGAGGTTCCCAGTTTCAGTGAAGGTGCTACAATATTTTTACAAGGCTTGATTGATGACTTTAGTGTTGATGATGCCTTGGAGGTTAAGAACATTGAGAGGGTCACAAATCATGATGTGCTTGAGTTTTTCCACTTTGCTTGCACATCTGAGGATATAAATAATCTTGCACATGCCTTGATGCTGAAGGAAACAATGAATTCTGTCATGGATAAAATAATCAAAGCTTTGTGTGACATATCTGAAGATAATGCTCATGTCCCGATGCTTTCTCGCACTCATGGACAGAATCAATGTATTATTGTGGGCTCTTTTGAACTCCTGTTATATGAAAGGTTGTTGAGAATATTGGGGAAATTTTCTGGTGCAGTTGGAAATTACAATGCACATGTTGTTTCATATCCTGAAGTTAACTGGCCTCACATTGCAGAACAGTTTGTACAATCTCTTGGATTAAGTTTTAATCCTTATGTTGCTCAGATTGAAACTCATGACTACATGGCAAAGCTTTTTCATTTGCTCATCCAGTTCAATAATATATTGATTGAATTTGATAGAGATGTATGGGGCTATATATCTTTGGGTTACTTTAACCAGACCACTAAGGCTGGGGAGGTTGGGTCTTCAACTATGCCTCACAAAGTGAATCCTATTGATTTTGAGAACAGCGAAGGTAATCTAGGTGTAGCTAATGGAGGTCTGTCTCATCTAAGCATGAAGTTGCCAATTTCGCATTGGCAGGCAAGGCCTACTTGA

Predicted protein sequences of Glyma.10g247800

Limit To All Plant Sequences

>Glyma.10g247800.1.p sequence-type=predicted peptide transcript=Glyma.10g247800.1 locus=Glyma.10g247800 ID=Glyma.10g247800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEFVALSNATQLGSFNPLRTNLQKVALAKPSSALTHPPTSTHNIFGPHSADFELSALTALSPLDGRYWGKVKELSPFLREYGLICFRIKWLLQLSQIPEIVEVPSFSEGATIFLQGLIDDFSVDDALEVKNIERVTNHDVLEFFHFACTSEDINNLAHALMLKETMNSVMDKIIKALCDISEDNAHVPMLSRTHGQNQCIIVGSFELLLYERLLRILGKFSGAVGNYNAHVVSYPEVNWPHIAEQFVQSLGLSFNPYVAQIETHDYMAKLFHLLIQFNNILIEFDRDVWGYISLGYFNQTTKAGEVGSSTMPHKVNPIDFENSEGNLGVANGGTLLNLSYLIISLLYLALTHSMHAFYLAVSLLCFHSPKIERDLTDSTVLRNMGVGIGHSLLAYKSTLREIGKLQVNEARLSEDLNQCWEVLAEPIQTVMRRYGVSEPYEKLKELTRGRAVTQKSIRDFIEGLYIPEEAKMNLLKLTPDTYVGAAVELARTVKNVVNTVYGRKI*

>Glyma.10g247800.2.p sequence-type=predicted peptide transcript=Glyma.10g247800.2 locus=Glyma.10g247800 ID=Glyma.10g247800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEFVALSNATQLGSFNPLRTNLQKVALAKPSSALTHPPTSTHNIFGPHSADFELSALTALSPLDGRYWGKVKELSPFLREYGLICFRIKWLLQLSQIPEIVEVPSFSEGATIFLQGLIDDFSVDDALEVKNIERVTNHDVLEFFHFACTSEDINNLAHALMLKETMNSVMDKIIKALCDISEDNAHVPMLSRTHGQNQCIIVGSFELLLYERLLRILGKFSGAVGNYNAHVVSYPEVNWPHIAEQFVQSLGLSFNPYVAQIETHDYMAKLFHLLIQFNNILIEFDRDVWGYISLGYFNQTTKAGEVGSSTMPHKVNPIDFENSEGNLGVANGGTLLNLSYLIISLLYLALTHSMHAFYLAVSLLCFHSPKIEVPQTHL*

>Glyma.10g247800.3.p sequence-type=predicted peptide transcript=Glyma.10g247800.3 locus=Glyma.10g247800 ID=Glyma.10g247800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEFVALSNATQLGSFNPLRTNLQKVALAKPSSALTHPPTSTHNIFGPHSADFELSALTALSPLDGRYWGKVKELSPFLREYGLICFRIKWLLQLSQIPEIVEVPSFSEGATIFLQGLIDDFSVDDALEVKNIERVTNHDVLEFFHFACTSEDINNLAHALMLKETMNSVMDKIIKALCDISEDNAHVPMLSRTHGQNQCIIVGSFELLLYERLLRILGKFSGAVGNYNAHVVSYPEVNWPHIAEQFVQSLGLSFNPYVAQIETHDYMAKLFHLLIQFNNILIEFDRDVWGYISLGYFNQTTKAGEVGSSTMPHKVNPIDFENSEGNLGVANGGLSHLSMKLPISHWQARPT*

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