Glyma.10g208300

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Report for Sequence Feature Glyma.10g208300

Feature Type:	gene_model
Chromosome:	Gm10
Start:	44002136
stop:	44009852
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.10g208300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G54840.1	AT	Ras-related small GTP-binding family protein	JGI	N/A	IEA
AT3G54840.2	AT	Ras-related small GTP-binding family protein	JGI	N/A	IEA
GO:0007264	GO-bp	small GTPase mediated signal transduction	JGI	N/A	IEA
GO:0005622	GO-cc	intracellular	JGI	N/A	IEA
GO:0005634	GO-cc	nucleus	JGI	N/A	IEA
GO:0005737	GO-cc	cytoplasm	JGI	N/A	IEA
GO:0003924	GO-mf	GTPase activity	EnsemblGenomes	N/A	IEA
GO:0003924	GO-mf	GTPase activity	JGI	N/A	IEA
GO:0005525	GO-mf	GTP binding	EnsemblGenomes	N/A	IEA
GO:0005525	GO-mf	GTP binding	JGI	N/A	IEA
KOG0075	KOG	GTP-binding ADP-ribosylation factor-like protein	JGI	N/A	IEA
KOG0092	KOG	GTPase Rab5/YPT51 and related small G protein superfamily GTPases	JGI	N/A	IEA
PTHR24073	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PTHR24073:SF254	Panther		JGI	N/A	IEA
PF00071	PFAM	Ras family	JGI	N/A	IEA
GN7V-68178	SoyCyc9-rxn	Enzyme name not determined	Plant Metabolic Network		ISS

Expression Patterns of Glyma.10g208300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g208300 not represented in the dataset	Glyma.10g208300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.10g208300

Paralog	Evidence	Comments
Glyma.20g182400	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.10g208300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma10g35230	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.10g208300

Limit To All Plant Sequences

>Glyma.10g208300.2 sequence-type=transcript locus=Glyma.10g208300 ID=Glyma.10g208300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGAGATCCTCGTCCTCACGGAAAGCATGATATAGGAGCCAACATTTTTTGTGCTAAGTGCAAACCACGCCAGAATTTCATTATTTCCATTAACTCCCGATTCGGCTTAAATTGGAACACCACCAATTTTCGTGGGAACCAACAAAACAAAAAAAGGGTCCAATTTTTTGAAAATTATTACCATCATTCATATTCATCAACGACCCCTCTTCTGTGCCCACTTCCAAATCTTCTCCTCTCGCTATGGGTTGCGGCTCCTCCCTTCCAGATAGGGGCTCAAGGCAGTTGGGTCGACCCAATTCAGAGAATGGTGGAGGGCAGGACGCCAAGAATCTGAGGGTCAAGCTTGTTCTCTTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTACGATTTGTTCGTGGTCAGTTTGATCCAACATCTAAGGTAACTGTTGGAGCTTCTTTTTTGTCGCAAACAATAGCTCTGCAAGACTCTACAACAGTCAAGTTTGAAATATGGGATACTGCTGGTCAAGAGAGGTATGCTGCGTTAGCACCGCTATATTACCGTGGTGCAGCAGTTGCAGTTATTGTTTATGATATAACAAGCCCAGAATCTTTCAGCAAAGCACAGTACTGGGTTAAGGAGCTACAAAAACATGGAAGCCCTGATATAGTGATGGCACTGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGGATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGGAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGATGTAGCCAGATAGCAGTTCAGTAAGGGAAGGGATCTGCATTAGCTTTGGATCCTTCAAAACTATATAATGTATGGATTGTGTTTATGTATATTGTGATTAGATAATTTCTATGGTCTTTTTATCAACCTGTAATAATAATATCCTGGAGGTCATGTCAGATAGATGATACGTATTAGGCTATGCTTTGTGAGACCCACAAATACGAGTCATGTCTGTTATGATTTCATATCCCTTGACTTGTCTCTTATTGATTGGTATGCCTAATTAAGGCTATAATATCAATGATGCCAAGTGAGACGCCCATGCATTTGGATTTGGTTGTTACAGACCATGCTTTGTGAGAACCACTAATCAATGCTAAATTGAACATATTTGGATGTTGGTGGTTTTATAAATTTACATTGCGTCTTACGTGGAC

>Glyma.10g208300.3 sequence-type=transcript locus=Glyma.10g208300 ID=Glyma.10g208300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGAGATCCTCGTCCTCACGGAAAGCATGATATAGGAGCCAACATTTTTTGTGCTAAGTGCAAACCACGCCAGAATTTCATTATTTCCATTAACTCCCGATTCGGCTTAAATTGGAACACCACCAATTTTCGTGGGAACCAACAAAACAAAAAAAGGGTCCAATTTTTTGAAAATTATTACCATCATTCATATTCATCAACGACCCCTCTTCTGTGCCCACTTCCAAATCTTCTCCTCTCGCTATGGGTTGCGGCTCCTCCCTTCCAGATAGGGGCTCAAGGCAGTTGGGTCGACCCAATTCAGAGAATGGTGGAGGGCAGGACGCCAAGAATCTGAGGGTCAAGCTTGTTCTCTTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTACGATTTGTTCGTGGTCAGTTTGATCCAACATCTAAGGTAACTGTTGGAGCTTCTTTTTTGTCGCAAACAATAGCTCTGCAAGACTCTACAACAGTCAAGTTTGAAATATGGGATACTGCTGGTCAAGAGAGGTATGCTGCGTTAGCACCGCTATATTACCGTGGTGCAGCAGTTGCAGTTATTGTTTATGATATAACAAGCCCAGAATCTTTCAGCAAAGCACAGTACTGGGTTAAGGAGCTACAAAAACATGGAAGCCCTGATATAGTGATGGCACTGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGGATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGAATGAGAATGTACGAACAATGGAAAATAGTTAGCTGTTGTGATTGTTATGGCAAATAAGGTTGGAGATGGTTACGTCATACATTGGGAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGATGTAGCCAGATAGCAGTTCAGTAAGGGAAGGGATCTGCATTAGCTTTGGATCCTTCAAAACTATATAATGTATGGATTGTGTTTATGTATATTGTGATTAGATAATTTCTATGGTCTTTTTATCAACCTGTAATAATAATATCCTGGAGGTCATGTCAGATAGATGATACGTATTAGGCTATGCTTTGTGAGACCCACAAATACGAGTCATGTCTGTTATGATTTCATATCCCTTGACTTGTCTCTTATTGATTGGTATGCCTAATTAAGGCTATAATATCAATGATGCCAAGTGAGACGCCCATGCATTTGGATTTGGTTGTTACAGACCATGCTTTGTGAGAACCACTAATCAATGCTAAATTGAACATATTTGGATGTTGGTGGTTTTATAAATTTACATTGCGTCTTACGTGGAC

>Glyma.10g208300.4 sequence-type=transcript locus=Glyma.10g208300 ID=Glyma.10g208300.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGAGATCCTCGTCCTCACGGAAAGCATGATATAGGAGCCAACATTTTTTGTGCTAAGTGCAAACCACGCCAGAATTTCATTATTTCCATTAACTCCCGATTCGGCTTAAATTGGAACACCACCAATTTTCGTGGGAACCAACAAAACAAAAAAAGGGTCCAATTTTTTGAAAATTATTACCATCATTCATATTCATCAACGACCCCTCTTCTGTGCCCACTTCCAAATCTTCTCCTCTCGCTATGGGTTGCGGCTCCTCCCTTCCAGATAGGGGCTCAAGGCAGTTGGGTCGACCCAATTCAGAGAATGGTGGAGGGCAGGACGCCAAGAATCTGAGGGTCAAGCTTGTTCTCTTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTACGATTTGTTCGTGGTCAGTTTGATCCAACATCTAAGGTAACTGTTGGAGCTTCTTTTTTGTCGCAAACAATAGCTCTGCAAGACTCTACAACAGTCAAGTTTGAAATATGGGATACTGCTGGTCAAGAGAGGTATGCTGCGTTAGCACCGCTATATTACCGTGGTGCAGCAGTTGCAGTTATTGTTTATGATATAACAAGCCCAGAATCTTTCAGCAAAGCACAGTACTGGGTTAAGGAGCTACAAAAACATGGAAGCCCTGATATAGTGATGGCACTGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGAGAAGAATGGTATGTTTTTCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGGAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGATGTAGCCAGATAGCAGTTCAGTAAGGGAAGGGATCTGCATTAGCTTTGGATCCTTCAAAACTATATAATGTATGGATTGTGTTTATGTATATTGTGATTAGATAATTTCTATGGTCTTTTTATCAACCTGTAATAATAATATCCTGGAGGTCATGTCAGATAGATGATACGTATTAGGCTATGCTTTGTGAGACCCACAAATACGAGTCATGTCTGTTATGATTTCATATCCCTTGACTTGTCTCTTATTGATTGGTATGCCTAATTAAGGCTATAATATCAATGATGCCAAGTGAGACGCCCATGCATTTGGATTTGGTTGTTACAGACCATGCTTTGTGAGAACCACTAATCAATGCTAAATTGAACATATTTGGATGTTGGTGGTTTTATAAATTTACATTGCGTCTTACGTGGAC

Coding sequences of Glyma.10g208300

Limit To All Plant Sequences

>Glyma.10g208300.1 sequence-type=CDS polypeptide=Glyma.10g208300.1.p locus=Glyma.10g208300 ID=Glyma.10g208300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTTGCGGCTCCTCCCTTCCAGATAGGGGCTCAAGGCAGTTGGGTCGACCCAATTCAGAGAATGGTGGAGGGCAGGACGCCAAGAATCTGAGGGTCAAGCTTGTTCTCTTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTACGATTTGTTCGTGGTCAGTTTGATCCAACATCTAAGGTAACTGTTGGAGCTTCTTTTTTGTCGCAAACAATAGCTCTGCAAGACTCTACAACAGTCAAGTTTGAAATATGGGATACTGCTGGTCAAGAGAGGTATGCTGCGTTAGCACCGCTATATTACCGTGGTGCAGCAGTTGCAGTTATTGTTTATGATATAACAAGCCCAGAATCTTTCAGCAAAGCACAGTACTGGGTTAAGGAGCTACAAAAACATGGAAGCCCTGATATAGTGATGGCACTGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGGATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGGACATTGTTGACTATGCTACTAGCAAGCTTCCCAATGATGTTCTTGCTGCTTGA

>Glyma.10g208300.2 sequence-type=CDS polypeptide=Glyma.10g208300.2.p locus=Glyma.10g208300 ID=Glyma.10g208300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTTGCGGCTCCTCCCTTCCAGATAGGGGCTCAAGGCAGTTGGGTCGACCCAATTCAGAGAATGGTGGAGGGCAGGACGCCAAGAATCTGAGGGTCAAGCTTGTTCTCTTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTACGATTTGTTCGTGGTCAGTTTGATCCAACATCTAAGGTAACTGTTGGAGCTTCTTTTTTGTCGCAAACAATAGCTCTGCAAGACTCTACAACAGTCAAGTTTGAAATATGGGATACTGCTGGTCAAGAGAGGTATGCTGCGTTAGCACCGCTATATTACCGTGGTGCAGCAGTTGCAGTTATTGTTTATGATATAACAAGCCCAGAATCTTTCAGCAAAGCACAGTACTGGGTTAAGGAGCTACAAAAACATGGAAGCCCTGATATAGTGATGGCACTGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGGATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGGAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGA

>Glyma.10g208300.3 sequence-type=CDS polypeptide=Glyma.10g208300.3.p locus=Glyma.10g208300 ID=Glyma.10g208300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTTGCGGCTCCTCCCTTCCAGATAGGGGCTCAAGGCAGTTGGGTCGACCCAATTCAGAGAATGGTGGAGGGCAGGACGCCAAGAATCTGAGGGTCAAGCTTGTTCTCTTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTACGATTTGTTCGTGGTCAGTTTGATCCAACATCTAAGGTAACTGTTGGAGCTTCTTTTTTGTCGCAAACAATAGCTCTGCAAGACTCTACAACAGTCAAGTTTGAAATATGGGATACTGCTGGTCAAGAGAGGTATGCTGCGTTAGCACCGCTATATTACCGTGGTGCAGCAGTTGCAGTTATTGTTTATGATATAACAAGCCCAGAATCTTTCAGCAAAGCACAGTACTGGGTTAAGGAGCTACAAAAACATGGAAGCCCTGATATAGTGATGGCACTGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGGATGGCACTGACTATGCAGAGAAGAATGGTATGTTTTTCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGAATGAGAATGTACGAACAATGGAAAATAGTTAG

>Glyma.10g208300.4 sequence-type=CDS polypeptide=Glyma.10g208300.4.p locus=Glyma.10g208300 ID=Glyma.10g208300.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTTGCGGCTCCTCCCTTCCAGATAGGGGCTCAAGGCAGTTGGGTCGACCCAATTCAGAGAATGGTGGAGGGCAGGACGCCAAGAATCTGAGGGTCAAGCTTGTTCTCTTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTACGATTTGTTCGTGGTCAGTTTGATCCAACATCTAAGGTAACTGTTGGAGCTTCTTTTTTGTCGCAAACAATAGCTCTGCAAGACTCTACAACAGTCAAGTTTGAAATATGGGATACTGCTGGTCAAGAGAGGTATGCTGCGTTAGCACCGCTATATTACCGTGGTGCAGCAGTTGCAGTTATTGTTTATGATATAACAAGCCCAGAATCTTTCAGCAAAGCACAGTACTGGGTTAAGGAGCTACAAAAACATGGAAGCCCTGATATAGTGATGGCACTGGTCGGTAATAAAGCTGATCTTCTTGAGAAGCGGGAAGTTGCTGTCCAGAGAAGAATGGTATGTTTTTCATAG

Predicted protein sequences of Glyma.10g208300

Limit To All Plant Sequences

>Glyma.10g208300.1.p sequence-type=predicted peptide transcript=Glyma.10g208300.1 locus=Glyma.10g208300 ID=Glyma.10g208300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGCGSSLPDRGSRQLGRPNSENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLLEKREVAVQDGTDYAEKNGMFFIETSAKTADNINELFEDIVDYATSKLPNDVLAA*

>Glyma.10g208300.2.p sequence-type=predicted peptide transcript=Glyma.10g208300.2 locus=Glyma.10g208300 ID=Glyma.10g208300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGCGSSLPDRGSRQLGRPNSENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLLEKREVAVQDGTDYAEKNGMFFIETSAKTADNINELFEEIAKRLPRPSVS*

>Glyma.10g208300.3.p sequence-type=predicted peptide transcript=Glyma.10g208300.3 locus=Glyma.10g208300 ID=Glyma.10g208300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGCGSSLPDRGSRQLGRPNSENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLLEKREVAVQDGTDYAEKNGMFFIETSAKTADNINELFENENVRTMENS*

>Glyma.10g208300.4.p sequence-type=predicted peptide transcript=Glyma.10g208300.4 locus=Glyma.10g208300 ID=Glyma.10g208300.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGCGSSLPDRGSRQLGRPNSENGGGQDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSPESFSKAQYWVKELQKHGSPDIVMALVGNKADLLEKREVAVQRRMVCFS*

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