SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.10g200200

Feature Type:gene_model
Chromosome:Gm10
Start:43183207
stop:43189075
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.10g200200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G52190.1AT PHF1 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K14003KEGG Membrane trafficking JGI N/AIEA
KOG0771 KOG Prolactin regulatory element-binding protein/Protein transport protein SEC12p JGI N/AIEA
PTHR23284PantherFam PROLACTIN REGULATORY ELEMENT BINDING PROTEIN JGI N/AIEA
PTHR23284:SF2PantherFam SEC12-LIKE PROTEIN 1 JGI N/AIEA
PF00400Pfam WD domain, G-beta repeat JGI N/AIEA

Gene model name correspondences to Glyma.10g200200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g34380 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g200200
>Glyma.10g200200.1 sequence-type=CDS polypeptide=Glyma.10g200200.1.p locus=Glyma.10g200200 id=Glyma.10g200200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTCTCATTTTCGTCTCTGACATTTCTATTTAAAATTTGCCGAAGAATCCAATTCAGCGATCTCCGAAGAGCTCCATTTGTTGCACTCCAATTGGAAAAAAGAAGTGAACTTGCGATCTGGGTATCCAATTTTCGAACTCTTTCGATGGGGAATGATGCAGGGTCACCGCAGGGTCCGGTTACGTGTGGGTCGTGGATTCGGAGGCCCGAGAATTTGAATTTGGTGGTGTTGGGAAGGTCCAGACGTGGCAGTTCTTGTCCTTCTCTCTTAGAGATTTTCTCCTTCGATCCCAAAACCACTTCTTTGTCTACCTCTCCTCTGACCACTTATGTGTTGGAAGCAGAGGAAGGTGATCCTGTTGCCATTACAGTTCACCCAAGTGGGGATGATTTTGTGTGCGCTCTCAGCAATGGTAGCTGCAAATTGTTTGAGCTGTATGGTCGTGAAACAAACATGAAGTTGTTGGCTAAGGAACTGGCTCCTCTACAGGGTATTGGTCCTCAGAAATGTATTTCTTTTAGTGTTGATGGGTCTAAATTTGCTGCTGGCGGAATGGATGGACATCTCAGAATCATGGAGTGGCCTAGTATGCGTGTGATTTTGGATGAACCTAGAGCACACAATTCAGTTCAGGATATGGATTTTAGTCTAGATTCAGAATTTCTAGCTTCAACTTCTACTGATGGTTCAGCAAGAATCTGGAAGACTGAAGATGGTGTTCCTTTGAATACTTTGTCTCGCAACTCGGATGAAAAGATTGAATTATGTCGATTTTCCAAGGACGGAACCAAACCATTTTTATTTTGCTCTGTTCAAAAAGGTGATACTTCTGTCACTGCGGTTTATGATATTAGCACATGGAATAAAATTGGGCATAAGAGGCTGATTAGAAAGTCTGCTTCAGTAATGTCAATTAGCAATGATGGGAAATACCTTTCTCTGGGCAGTAAAGATGGAGACATATGTGTAGTTGAAGTAAAGAAAATGCAGATATACCATTATAGCAAGAGACTGCACCTGGGTACAAATATTGCATCGCTTGAGTTCTGTCCCGGGGAAAGGGTTGTACTTACAACCTCAGTAGAATGGGGAGCGCTGGTCACTAAGCTGACTGTACCTAAAGATTGGAAAGAATGGCAGATCTATTTGGTGCTATTGGGACTATTTTTAGCATCAGCTGTTGCATTTTACATATTCTTTGAGAACTCTGATTCATTCTGGAACTTTCCCATGGGCAAAGACCAACCAGCAAGACCAAGGTTTAAACCTGTGTTAAAAGATCCCCAGTCTTATGATGATCAAAATATTTGGGGGCCAGTAGATATGTGA
Predicted protein sequences of Glyma.10g200200
>Glyma.10g200200.1.p sequence-type=predicted peptide transcript=Glyma.10g200200.1 locus=Glyma.10g200200 id=Glyma.10g200200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLSFSSLTFLFKICRRIQFSDLRRAPFVALQLEKRSELAIWVSNFRTLSMGNDAGSPQGPVTCGSWIRRPENLNLVVLGRSRRGSSCPSLLEIFSFDPKTTSLSTSPLTTYVLEAEEGDPVAITVHPSGDDFVCALSNGSCKLFELYGRETNMKLLAKELAPLQGIGPQKCISFSVDGSKFAAGGMDGHLRIMEWPSMRVILDEPRAHNSVQDMDFSLDSEFLASTSTDGSARIWKTEDGVPLNTLSRNSDEKIELCRFSKDGTKPFLFCSVQKGDTSVTAVYDISTWNKIGHKRLIRKSASVMSISNDGKYLSLGSKDGDICVVEVKKMQIYHYSKRLHLGTNIASLEFCPGERVVLTTSVEWGALVTKLTVPKDWKEWQIYLVLLGLFLASAVAFYIFFENSDSFWNFPMGKDQPARPRFKPVLKDPQSYDDQNIWGPVDM*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo