Glyma.10g196100

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Report for Sequence Feature Glyma.10g196100

Feature Type:	gene_model
Chromosome:	Gm10
Start:	42752699
stop:	42761978
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.10g196100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G03540.1	AT	exocyst subunit exo70 family protein A1	JGI	N/A	IEA
GO:0006887	GO-bp	exocytosis	EnsemblGenomes	N/A	IEA
GO:0006887	GO-bp	exocytosis	JGI	N/A	IEA
GO:0000145	GO-cc	exocyst	EnsemblGenomes	N/A	IEA
GO:0000145	GO-cc	exocyst	JGI	N/A	IEA
KOG2344	KOG	Exocyst component protein and related proteins	JGI	N/A	IEA
PTHR12542	Panther	EXOCYST COMPLEX PROTEIN EXO70	JGI	N/A	IEA
PTHR12542:SF7	Panther	EXOCYST COMPLEX COMPONENT 7	JGI	N/A	IEA
PF03081	PFAM	Exo70 exocyst complex subunit	JGI	N/A	IEA

Expression Patterns of Glyma.10g196100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g196100 not represented in the dataset	Glyma.10g196100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.10g196100

Paralog	Evidence	Comments
Glyma.20g194100	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.10g196100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma10g34000	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.10g196100

Limit To All Plant Sequences

>Glyma.10g196100.2 sequence-type=transcript locus=Glyma.10g196100 ID=Glyma.10g196100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CGTAGAAAAATAATCCGTGACAACAGTGGAAAGACCAGAAAAGTGTGGGACCATCCCTAACATCACCTTCACAGCTTCTACCGATTGTTGAAAAAAAAGACTCTACCAGCAATAGCCTCTGATTTCTTCTTTCACTTTCTTTAGGTTATGGTTTTCTCAGAAGATTGAACTTaaacaaaaacaacaagaaagaaagaaagaaagaaGATGGGAATTGCAGTGGGAGGTGTTGATTTGCTGAGTGAAAAAGCGGCGATGATGAGAGAGTGTCTGCAGAAGAGTGAAACCATCACAGACAACGTCGTCACCATTCTCGGTTCCTTCGACCACCGTCTCTCCGCCCTCGAAACCGCCATGCGTCCAACTCAGATTAGAACTCACTCTATTAGGAAGGCTCATGAGAATATTGATAGGACTTTGAAGGCTGCGGAGGTTATATTGGCTCACTTCGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGGCCACATGAAGACTTGGAAAACTATCTTGAAGCAATTGATAAGTTGAGAAGCAACATTCAGTTTTTTGGTAGTAAGAAGGGTTTCAAGAGTAGTGATGGCATTGTCGTGCATGCTAATAATTTGCTAGCTAAGGCTATTTCGAAGCTAGAAGATGAGTTTAGGCAGTTATTATTATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGACTGCCTTCCAAACTCAATGCGACCTTCATCACCTGGCCATGAGGGTGATCCTAGTGGCAAGAATCACCATTCTGAGTCTCACAACAATAATGCTGAGGCTGTTGTATACACACCTCCCGCTCTTATaccgccaagatttttgccactgctacatgatttagctcagcaaatggttgaagctggccaccaacaaccgttactcaaaatatacagGGATGCCCGTTCTCATGTATTGGAAGAGAGCCTCCAAAAACTTGGAGTGGAGAAACTCAACAAAGATGATGTTCAAAAGCTGCAGTGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTCAGTGAACAGTGCTTCGCTGAGGTGACTACAAACAGTGTCTCTATGCTACTCAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCGGAAAAATTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAACTTCATTCAGAGATTGAAACTCTTTTTAAAGGCAAAGCTTGCTCTGCAATAAGAGAAGCTGCAACTAGTTTGACAAAACGCCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAGGCAGTTGAGAAAGATGCTACGAAGACTGCAGTAACAGATGGAACTGTCCATCCTCTAACAAGCTATGTAATTAACTATGTGAAGTTTTTATTTGACTACCAATCCACCTTGAAGCAACTTTTTCAGGAATTTGAGGGTGGTGAGGATTCTTCACAGCTAGCATCTGTGACAGTGCGAATAATGCAAGCTTTGCAAACCAATTTAGATGGGAAATCAAAGCAGTATAAAGACCTTGCGTTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCCAAGGATTTACTGGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATTCAGGGCCTTACTTCATCtggtggtgggagtggtactgctggtggtgatggtggAACCGGAAGCAGTAGCGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGTCATTCAATATTATGTTTGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACACTGAGTTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTTGTCAAACGATTTGGGCCTCTAGTGGAGAGCGGAAAGAATCCTCAGAAGTACATCAAATACTCAGCAGAAGATCTAGACCGAATGTTGGGTGAATTTTTTGAGGTATAATAATTGCTTATAAGGTTGTATTTGGGGGCTGAAAAGGAGTGTTATCATTTTTTGTCTTTTGGGTACTGCCACAAGTGTGATAAGATGGTGAATTACTCTGCTTCCGTACATTTTGTGCATAGTTCACTTGATTTGTTGCGTGAGATGTTTAGTCTTCAAAGCAAATGTATGTCTGCTAGTAGAATCTCCGTTTATTGGAGCATTGATTTTTTGAACCACGTGTACAAGTTTTTGTGATTATATGTAAACACGGGATTTGGTGTGTAATACTCTACCATCAAATTTCAAACAttattttgtaattcttttgttatttccatttttaatttttGCATGCTATATATGGTACATTGGGATGTAAGGAAGGGATGGAATAGAAACAAAATGGAAGAAATAAAGACATGTTGG

Coding sequences of Glyma.10g196100

Limit To All Plant Sequences

>Glyma.10g196100.1 sequence-type=CDS polypeptide=Glyma.10g196100.1.p locus=Glyma.10g196100 ID=Glyma.10g196100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAATTGCAGTGGGAGGTGTTGATTTGCTGAGTGAAAAAGCGGCGATGATGAGAGAGTGTCTGCAGAAGAGTGAAACCATCACAGACAACGTCGTCACCATTCTCGGTTCCTTCGACCACCGTCTCTCCGCCCTCGAAACCGCCATGCGTCCAACTCAGATTAGAACTCACTCTATTAGGAAGGCTCATGAGAATATTGATAGGACTTTGAAGGCTGCGGAGGTTATATTGGCTCACTTCGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGGCCACATGAAGACTTGGAAAACTATCTTGAAGCAATTGATAAGTTGAGAAGCAACATTCAGTTTTTTGGTAGTAAGAAGGGTTTCAAGAGTAGTGATGGCATTGTCGTGCATGCTAATAATTTGCTAGCTAAGGCTATTTCGAAGCTAGAAGATGAGTTTAGGCAGTTATTATTATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGACTGCCTTCCAAACTCAATGCGACCTTCATCACCTGGCCATGAGGGTGATCCTAGTGGCAAGAATCACCATTCTGAGTCTCACAACAATAATGCTGAGGCTGTTGTATACACACCTCCCGCTCTTATACCGCCAAGATTTTTGCCACTGCTACATGATTTAGCTCAGCAAATGGTTGAAGCTGGCCACCAACAACCGTTACTCAAAATATACAGGGATGCCCGTTCTCATGTATTGGAAGAGAGCCTCCAAAAACTTGGAGTGGAGAAACTCAACAAAGATGATGTTCAAAAGCTGCAGTGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTCAGTGAACAGTGCTTCGCTGAGGTGACTACAAACAGTGTCTCTATGCTACTCAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCGGAAAAATTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAACTTCATTCAGAGATTGAAACTCTTTTTAAAGGCAAAGCTTGCTCTGCAATAAGAGAAGCTGCAACTAGTTTGACAAAACGCCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAGGCAGTTGAGAAAGATGCTACGAAGACTGCAGTAACAGATGGAACTGTCCATCCTCTAACAAGCTATGTAATTAACTATGTGAAGTTTTTATTTGACTACCAATCCACCTTGAAGCAACTTTTTCAGGAATTTGAGGGTGGTGAGGATTCTTCACAGCTAGCATCTGTGACAGTGCGAATAATGCAAGCTTTGCAAACCAATTTAGATGGGAAATCAAAGCAGTATAAAGACCTTGCGTTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCCAAGGATTTACTGGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGTGCCTATCTATTCAGGGCCTTACTTCATCTGGTGGTGGGAGTGGTACTGCTGGTGGTGATGGTGGAACCGGAAGCAGTAGCGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGTCATTCAATATTATGTTTGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACACTGAGTTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTTGTCAAACGATTTGGGCCTCTAGTGGAGAGCGGAAAGAATCCTCAGAAGTACATCAAATACTCAGCAGAAGATCTAGACCGAATGTTGGGTGAATTTTTTGAGGTTGTATTTGGGGGCTGA

>Glyma.10g196100.2 sequence-type=CDS polypeptide=Glyma.10g196100.2.p locus=Glyma.10g196100 ID=Glyma.10g196100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAATTGCAGTGGGAGGTGTTGATTTGCTGAGTGAAAAAGCGGCGATGATGAGAGAGTGTCTGCAGAAGAGTGAAACCATCACAGACAACGTCGTCACCATTCTCGGTTCCTTCGACCACCGTCTCTCCGCCCTCGAAACCGCCATGCGTCCAACTCAGATTAGAACTCACTCTATTAGGAAGGCTCATGAGAATATTGATAGGACTTTGAAGGCTGCGGAGGTTATATTGGCTCACTTCGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGGCCACATGAAGACTTGGAAAACTATCTTGAAGCAATTGATAAGTTGAGAAGCAACATTCAGTTTTTTGGTAGTAAGAAGGGTTTCAAGAGTAGTGATGGCATTGTCGTGCATGCTAATAATTTGCTAGCTAAGGCTATTTCGAAGCTAGAAGATGAGTTTAGGCAGTTATTATTATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGACTGCCTTCCAAACTCAATGCGACCTTCATCACCTGGCCATGAGGGTGATCCTAGTGGCAAGAATCACCATTCTGAGTCTCACAACAATAATGCTGAGGCTGTTGTATACACACCTCCCGCTCTTATACCGCCAAGATTTTTGCCACTGCTACATGATTTAGCTCAGCAAATGGTTGAAGCTGGCCACCAACAACCGTTACTCAAAATATACAGGGATGCCCGTTCTCATGTATTGGAAGAGAGCCTCCAAAAACTTGGAGTGGAGAAACTCAACAAAGATGATGTTCAAAAGCTGCAGTGGGAGATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTCAGTGAACAGTGCTTCGCTGAGGTGACTACAAACAGTGTCTCTATGCTACTCAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCGGAAAAATTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAACTTCATTCAGAGATTGAAACTCTTTTTAAAGGCAAAGCTTGCTCTGCAATAAGAGAAGCTGCAACTAGTTTGACAAAACGCCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAGGCAGTTGAGAAAGATGCTACGAAGACTGCAGTAACAGATGGAACTGTCCATCCTCTAACAAGCTATGTAATTAACTATGTGAAGTTTTTATTTGACTACCAATCCACCTTGAAGCAACTTTTTCAGGAATTTGAGGGTGGTGAGGATTCTTCACAGCTAGCATCTGTGACAGTGCGAATAATGCAAGCTTTGCAAACCAATTTAGATGGGAAATCAAAGCAGTATAAAGACCTTGCGTTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCCAAGGATTTACTGGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAGCATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTGCCTATCTATTCAGGGCCTTACTTCATCTGGTGGTGGGAGTGGTACTGCTGGTGGTGATGGTGGAACCGGAAGCAGTAGCGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGTCATTCAATATTATGTTTGAGGAACTCCATCAGAAACAATCTCAATGGACAGTTCCTGACACTGAGTTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCATTTGTCAAACGATTTGGGCCTCTAGTGGAGAGCGGAAAGAATCCTCAGAAGTACATCAAATACTCAGCAGAAGATCTAGACCGAATGTTGGGTGAATTTTTTGAGGTATAA

Predicted protein sequences of Glyma.10g196100

Limit To All Plant Sequences

>Glyma.10g196100.1.p sequence-type=predicted peptide transcript=Glyma.10g196100.1 locus=Glyma.10g196100 ID=Glyma.10g196100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGIAVGGVDLLSEKAAMMRECLQKSETITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKAAEVILAHFDQYRQAEAKILKGPHEDLENYLEAIDKLRSNIQFFGSKKGFKSSDGIVVHANNLLAKAISKLEDEFRQLLLSYSKPVEPERLFDCLPNSMRPSSPGHEGDPSGKNHHSESHNNNAEAVVYTPPALIPPRFLPLLHDLAQQMVEAGHQQPLLKIYRDARSHVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACSAIREAATSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFEGGEDSSQLASVTVRIMQALQTNLDGKSKQYKDLALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKCLSIQGLTSSGGGSGTAGGDGGTGSSSGASRAIVKDRFKSFNIMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYSAEDLDRMLGEFFEVVFGG*

>Glyma.10g196100.2.p sequence-type=predicted peptide transcript=Glyma.10g196100.2 locus=Glyma.10g196100 ID=Glyma.10g196100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGIAVGGVDLLSEKAAMMRECLQKSETITDNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKAAEVILAHFDQYRQAEAKILKGPHEDLENYLEAIDKLRSNIQFFGSKKGFKSSDGIVVHANNLLAKAISKLEDEFRQLLLSYSKPVEPERLFDCLPNSMRPSSPGHEGDPSGKNHHSESHNNNAEAVVYTPPALIPPRFLPLLHDLAQQMVEAGHQQPLLKIYRDARSHVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGKACSAIREAATSLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFEGGEDSSQLASVTVRIMQALQTNLDGKSKQYKDLALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGTAGGDGGTGSSSGASRAIVKDRFKSFNIMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYSAEDLDRMLGEFFEV*

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