SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.10g180000

Feature Type:gene_model
Chromosome:Gm10
Start:41442537
stop:41443809
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.10g180000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G04240.1AT IAA3,SHY2 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
K14484KEGG Plant hormone signal transduction JGI N/AIEA
PTHR31734PantherFam AUXIN-RESPONSIVE PROTEIN IAA17 JGI N/AIEA
PF02309Pfam AUX/IAA family JGI N/AIEA

Proteins Associated with Glyma.10g180000
LocusGene SymbolProtein Name
IAA37 Indole-3-Acetic Acid Responsive Gene 37

Gene model name correspondences to Glyma.10g180000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g32330 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g180000
>Glyma.10g180000.1 sequence-type=CDS polypeptide=Glyma.10g180000.1.p locus=Glyma.10g180000 id=Glyma.10g180000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTATTACAGGGCTAAGATAGTGGGGTGGCCACCAATCAGATCCTACAGAAAGAACAGCCTTCAGGAGAATGATGGTGCTGGGATTTATGTGAAAGTGAGCATGGATGGAGCTCCTTACCTCAGAAAGATAGACTTGAAGGTCTATGGAGGCTACACACAACTCCTCAAAGCTCTAGAAAACATGTTCAAGTTGACCATAGGTGAGTATTCTGAAAAAGAAGGTTATAAGGGATCTGACTATGCACCTACATATGAAGACAAAGATGGTGACTGGATGTTAGTTGGAGATGTTCCATGGGACATGTTTGTGACTTCTTGCAAAAGGCTAAGAATCATGAAAGGATCAGAGGCAAGGGGTTTGGGTTGTGCTGTATGA
Predicted protein sequences of Glyma.10g180000
>Glyma.10g180000.1.p sequence-type=predicted peptide transcript=Glyma.10g180000.1 locus=Glyma.10g180000 id=Glyma.10g180000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MYYRAKIVGWPPIRSYRKNSLQENDGAGIYVKVSMDGAPYLRKIDLKVYGGYTQLLKALENMFKLTIGEYSEKEGYKGSDYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGLGCAV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo