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Report for Sequence Feature Glyma.10g128700

Feature Type:gene_model
Chromosome:Gm10
Start:34186431
stop:34189198
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.10g128700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G04610.1AT YUCCA 3 JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0004497GO-mf monooxygenase activity EnsemblGenomesN/AIEA
GO:0004499GO-mf N,N-dimethylaniline monooxygenase activity EnsemblGenomesN/AIEA
GO:0004499GO-mf N,N-dimethylaniline monooxygenase activity JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding EnsemblGenomesN/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding JGI N/AIEA
GO:0050661GO-mf NADP binding EnsemblGenomesN/AIEA
GO:0050661GO-mf NADP binding JGI N/AIEA
KOG1399 KOG Flavin-containing monooxygenase JGI N/AIEA
PTHR23023Panther DIMETHYLANILINE MONOOXYGENASE JGI N/AIEA
PTHR23023:SF5Panther JGI N/AIEA
PF00743PFAM Flavin-binding monooxygenase-like JGI N/AIEA
PWYDQC-4SoyCyc9 indole-3-acetate biosynthesis I Plant Metabolic Network ISS
GN7V-63079SoyCyc9-rxn indole-3-pyruvate monooxygenase Plant Metabolic Network ISS

Expression Patterns of Glyma.10g128700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.10g128700
ParalogEvidenceComments
Glyma.20g080000 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.10g128700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g25760 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g128700
>Glyma.10g128700.1 sequence-type=CDS polypeptide=Glyma.10g128700.1.p locus=Glyma.10g128700 ID=Glyma.10g128700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCATGACATATGTCTGAACATGCCACCAATGGTTCAAACCTTCGACCCAGAGGACCTGTTCAAAAGGCGTTGCATATGGGTGAACGGACCCGTTATAGTAGGTGCTGGCCCTTCAGGTCTTGCAGTGGCAGCATGCCTCAAAGAGCAAGGTGTTCCATTCTTAATCCTCGAGAGAGCAAACTGCATTGCCTCTCTTTGGCAAAACCGCACCTACGATCGCTTAAAGCTTCATCTCCCAAAACAGTTTTGTCAATTACCAAACTTCCCTTTCCCTGAGGACTTCCCTGAATACCCCACAAAGTTTCAGTTCATAAGCTACCTTGAAAGCTATGCAAAGCACTTCAACATTTCCCCACAGTTCAATGAAACAGTGCAGTCTGCAAAGTATGATGAGACCTTTGGCCTCTGGAGGGTCAAAACCATCAGGAAGATCAAGAAGTTAGGAGAAGCCTCTTCAGGTTGTTGTGGTGCTGTTGAGTGTGAAGTTGAGTACATTTGCAGGTGGCTTGTCGTCGCCACCGGCGAAAACTCGGAGAAAGTGGTGCCTGAGTTTGAAGGGTTGGGAGAGTTTGGTGGCCATGTTATGCATGCTTGTGACTATAAATCTGGGGAGGGATATGGTGGGCAAAAAGTGCTTGTTGTTGGGTGTGGAAATTCAGGCATGGAGGTCTCACTGGATCTTTGTAACCACAATGCTAACCCATCAATGGTGGTTAGAAGCTCAGTTCATGTGTTGCCAAGAGAAGCTTTTGGGAAATCTACCTTTGAGCTTGCTGTGATGTTAATGAAACGGTTTCCTCTATGGATGGTTGATAAGATATTGCTGGTTCTGGCACGTTTGATTTTGGGGAATGTTGAAAAGTATGGTCTAAAAAGGCCTTCAGTGGGTCCTTTGGAGCTCAAGCACACTGCAGGGAAGACCCCTGTGTTGGACATTGGGGCCCTTGAGAAAATTAGATCTGGCAAAATCAAAGTGGTTCCTGGAATCAGAAGGTTCTTCCCAGGGAAAGTTGAACTTGTTGATGGCCAAGTTCTTCAGATTGATTCTGTGGTTCTTGCAACTGGGTATCACAGCAATGTACCATCATGGTTGAAGGAGAATGATTTTTTTACCAGTGATGGGACTCCAAGGAACCCATTTCCAAATGGGTGGAGAGGCAAAGGTGGTCTTTATGCTGTAGGGTTCACAAGGAAAGGTCTTTCTGGTGCATCATTGGATGCAATTAATGTGGCTCATGACATTGCCAAGAATTGGAAAGAGGAAAACAAACAGAAGAGGAAAACAGTGGCTGCACGCCACAGGAGATGCATATCACACTTCTAA
Predicted protein sequences of Glyma.10g128700
>Glyma.10g128700.1.p sequence-type=predicted peptide transcript=Glyma.10g128700.1 locus=Glyma.10g128700 ID=Glyma.10g128700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MHDICLNMPPMVQTFDPEDLFKRRCIWVNGPVIVGAGPSGLAVAACLKEQGVPFLILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPEYPTKFQFISYLESYAKHFNISPQFNETVQSAKYDETFGLWRVKTIRKIKKLGEASSGCCGAVECEVEYICRWLVVATGENSEKVVPEFEGLGEFGGHVMHACDYKSGEGYGGQKVLVVGCGNSGMEVSLDLCNHNANPSMVVRSSVHVLPREAFGKSTFELAVMLMKRFPLWMVDKILLVLARLILGNVEKYGLKRPSVGPLELKHTAGKTPVLDIGALEKIRSGKIKVVPGIRRFFPGKVELVDGQVLQIDSVVLATGYHSNVPSWLKENDFFTSDGTPRNPFPNGWRGKGGLYAVGFTRKGLSGASLDAINVAHDIAKNWKEENKQKRKTVAARHRRCISHF*






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