Glyma.10g124700

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Report for Sequence Feature Glyma.10g124700

Feature Type:	gene_model
Chromosome:	Gm10
Start:	32501982
stop:	32507559
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.10g124700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G33150.1	AT	peroxisomal 3-ketoacyl-CoA thiolase 3	JGI	N/A	IEA
GO:0008152	GO-bp	metabolic process	EnsemblGenomes	N/A	IEA
GO:0008152	GO-bp	metabolic process	JGI	N/A	IEA
GO:0003824	GO-mf	catalytic activity	EnsemblGenomes	N/A	IEA
GO:0016740	GO-mf	transferase activity	EnsemblGenomes	N/A	IEA
GO:0016746	GO-mf	transferase activity, transferring acyl groups	EnsemblGenomes	N/A	IEA
GO:0016747	GO-mf	transferase activity, transferring acyl groups other than amino-acyl groups	EnsemblGenomes	N/A	IEA
GO:0016747	GO-mf	transferase activity, transferring acyl groups other than amino-acyl groups	JGI	N/A	IEA
KOG1389	KOG	3-oxoacyl CoA thiolase	JGI	N/A	IEA
PTHR18919	Panther	ACETYL-COA C-ACYLTRANSFERASE	JGI	N/A	IEA
PTHR18919:SF15	Panther		JGI	N/A	IEA
PF00108	PFAM	Thiolase, N-terminal domain	JGI	N/A	IEA
PF02803	PFAM	Thiolase, C-terminal domain	JGI	N/A	IEA
PWY-5136	SoyCyc9	fatty acid β-oxidation II (peroxisome)	Plant Metabolic Network		ISS
PWY-561	SoyCyc9	superpathway of glyoxylate cycle and fatty acid degradation	Plant Metabolic Network		ISS
PWY-735	SoyCyc9	jasmonic acid biosynthesis	Plant Metabolic Network		ISS
GN7V-49027	SoyCyc9-rxn	acetyl-CoA C-acyltransferase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.10g124700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g124700 not represented in the dataset	Glyma.10g124700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.10g124700

Paralog	Evidence	Comments
Glyma.20g077000	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.10g124700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma10g24590	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.10g124700

Limit To All Plant Sequences

>Glyma.10g124700.2 sequence-type=transcript locus=Glyma.10g124700 ID=Glyma.10g124700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTAAGTTCTGCTCTTACTCAAATGAAATATCTCATGTTAAGCATGTGCTTTATTTAAGAATATAGTGTTCAGCTGTGAATTATGATGATTTGTGTTTGAGGGGTCTTTAATTTTTAGCCAAATTATGTATTTGCTCTTTTGAAGTGCTTATCGGACTGCTCATTGCAAAGCTAAACGAGGTGGTTTCAAAGACACTCTTCCTGATGATCTACTGGCTCCTGTTTTGAAGGCTGTAATTGAGAAAACCAATGTGAACCCAAGTGAAGTTGGGGATATTGTTGTAGGTAGTGTATTGGCTCCTGGAGCTCAAAGAGCTAGTGAATGCCGAATGGCTGCATTTTATGCTGGTTTTCCCGAAACTGTGCCTGTTAGGACCGTTAATAGGCAATGTTCATCTGGGCTCCAGGCTGTCGCTGATGTAGCTGCTGCTATAAGGGCTGGGTTCTATGACATTGGTATTGGTGCCGGTTTGGAATCTATGACCACTAATCCAATGGGATGGGATGGATCAGTGAATCCTAAGGTAAAAATGTTTGAACAAGCACAAAACTGCCTTCTTCCTATGGGAATTACCTCTGAAAATGTTGCACAGCGCTTTGGGGTTTCAAGGAAGGAACAAGACCAGGCTGCAGTTGAGTCTCACAGGCGAgctgctgcagctactgctgctgGTAAATTTAAAGATGAAATTGTCCCAGTTACCACCAAGATTGTGGACCCAAAAACCGGTGAGGAGAAATCTGTCACCATTTCTGTTGATGATGGAATTCGACCTGGCACAACAGTGTCTGATCTAGGAAGACTCAAACCTGTGTTCAAGAAAGACGGAAGCACCACTGCTGGTAATTCTAGCCAGGTGACCGATGGGGCTTCAGCTGTTCTGCTGATGAAAAGAAGTGTTGCATTGCAAAAGGGGCTACCCATTCTTGGTGTATTCAGGACTTTTGCAGCAGTTGGTGTTGATCCTGCCATCATGGGTGTTGGCCCTGCTGCTGCAATTCCTGTTGCTGTTAAGGCTGCAGGTCTAGAGCTTGATGATATTGATCTTTTTGAAATAAATGAGGCATTTGCCTCCCAGTTCGTGTATTGCCGTAACAAGCTAGGGCTTGATCCAGAAAAGATCAATGTTAATGGAGGTGCAATGGCAATTGGGCATCCTCTGGGTTCAACAGGTGCTCGATGTGTTGCAACTCTGTTGCATGAAATGAAGAAACGTGGCAGGGACTGTCGATTTGGAGTTATATCTATGTGCATAGGTACTGGAATGGGGGCAGCTGCTGTTTTTGAGAGTGGTGATTGTGCTGATGAGCTATGCAATGCCCGGAAAGTGGATGACCTTCTTTTATCCAAGGATGCTCGCTTGAAATAGTTACTTCATACTCACTATATTTGGTCATCAAATAAGAAATCACAATAAAGTCTTTTTCTATGGTAGTGATAATGTCAACCACTCCTCAAGCGTTTAATCCTTTCTACTTATTAGACTTGCATTAATTTGTGATATATTTTGGACAATTGTAAACATACACTTAATTTTTCTTCTATATCTTTTTCACTCCACTTTTTCTTTCTATTTCTCCCTTTCTTTCTGATCACATCAGTTTTTTTGGCTTTTTTTTCTTCCTCAAGAGTCACTCTCTCTTCCCTACATTTATCCACTCTAAAATTGGGGTGGACATTCATGTATGGTTTGGTCGTGTGGAATGGAAAGGAAGGGAATTGAGAATAA

>Glyma.10g124700.3 sequence-type=transcript locus=Glyma.10g124700 ID=Glyma.10g124700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GACTCAAAAGCTCAATAAATGCAAGTAACCAAGTGAACAAATCAAATCTCTCTCTCAATCTAGCCTTCTTTCTTTTTTTCAATTTCCAAATCACGAAACTCAAGAAGATGGAGAAAGCGATCAACAGACAGAAGATTTTGCTTCATCATCTCAACCCTTCATCATCCACCCACCCCAACGAATCATCCTCCCTCCATGCTTCAGCATGTGTGGCGGGGGATAGCGCTGCTTATCAAAGGACATCGACATTCGGGGACGATGTTGTGATCGTGGCTGCTTATCGGACTGCTCATTGCAAAGCTAAACGAGGTGGTTTCAAAGACACTCTTCCTGATGATCTACTGGCTCCTGTTTTGAAGGCTGTAATTGAGAAAACCAATGTGAACCCAAGTGAAGTTGGGGATATTGTTGTAGGTAGTGTATTGGCTCCTGGAGCTCAAAGAGCTAGTGAATGCCGAATGGCTGCATTTTATGCTGGTTTTCCCGAAACTGTGCCTGTTAGGACCGTTAATAGGCAATGTTCATCTGGGCTCCAGGCTGTCGCTGATGTAGCTGCTGCTATAAGGGCTGGGTTCTATGACATTGGTATTGGTGCCGGTTTGGAATCTATGACCACTAATCCAATGGGATGGGATGGATCAGTGAATCCTAAGGTAAAAATGTTTGAACAAGCACAAAACTGCCTTCTTCCTATGGGAATTACCTCTGAAAATGTTGCACAGCGCTTTGGGGTTTCAAGGAAGGAACAAGACCAGGCTGCAGTTGAGTCTCACAGGCGAgctgctgcagctactgctgctgGTAAATTTAAAGATGAAATTGTCCCAGTTACCACCAAGATTGTGGACCCAAAAACCGGTGAGGAGAAATCTGTCACCATTTCTGTTGATGATGGAATTCGACCTGGCACAACAGTGTCTGATCTAGGAAGACTCAAACCTGTGTTCAAGAAAGACGGAAGCACCACTGCTGGTAATTCTAGCCAGGTGACCGATGGGGCTTCAGCTGTTCTGCTGATGAAAAGAAGTGTTGCATTGCAAAAGGGGCTACCCATTCTTGGTGTATTCAGGACTTTTGCAGCAGTTGGTGTTGATCCTGCCATCATGGGTGTTGGCCCTGCTGCTGCAATTCCTGTTGCTGTTAAGGCTGCAGGTCTAGAGCTTGATGATATTGATCTTTTTGAAATAAATGAGGCATTTGCCTCCCAGTTCGTGTATTGCCGTAACAAGCTAGGGCTTGATCCAGAAAAGATCAATGTTAATGGAGGTGCAATGGCAATTGGGCATCCTCTGGGTTCAACAGGTGTATACCACAACTTTCATTCTTACATTACAAATGCAACACTACCACCGCTGATTACAAAAGCATTCAGCTATTCTCGTTCATATATAAAATAAAATAATTTTGGCCTACAGAAGTTCCCCTTCTTTTAATTAGGCCTACAAAATATAATGTCAAGCACAAGATTTGGTAAGAAACTAGACTAGCTGATTGGAGTGGTTGAACAGGAAACCAGCCCACCAATACAAAAACAGCCTTGAATCAGTTGACAAAAACAACCGGACCAGATTAGGATATATTCTTTGTTGACACCAAAGTGGGAAAATAAGGACTCAAGCCTGGATCCCTTGGATGGAAAGTGATTGATGTGTTATTTCAATTAGTTTCTTTACTAGTTCGATTTCTAATTTAAGAGCATTGGTTATGCATGGGATGCCACATATACCTCCAAATAATGAGCTAATTTGTGGAGT

Coding sequences of Glyma.10g124700

Limit To All Plant Sequences

>Glyma.10g124700.1 sequence-type=CDS polypeptide=Glyma.10g124700.1.p locus=Glyma.10g124700 ID=Glyma.10g124700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAAAGCGATCAACAGACAGAAGATTTTGCTTCATCATCTCAACCCTTCATCATCCACCCACCCCAACGAATCATCCTCCCTCCATGCTTCAGCATGTGTGGCGGGGGATAGCGCTGCTTATCAAAGGACATCGACATTCGGGGACGATGTTGTGATCGTGGCTGCTTATCGGACTGCTCATTGCAAAGCTAAACGAGGTGGTTTCAAAGACACTCTTCCTGATGATCTACTGGCTCCTGTTTTGAAGGCTGTAATTGAGAAAACCAATGTGAACCCAAGTGAAGTTGGGGATATTGTTGTAGGTAGTGTATTGGCTCCTGGAGCTCAAAGAGCTAGTGAATGCCGAATGGCTGCATTTTATGCTGGTTTTCCCGAAACTGTGCCTGTTAGGACCGTTAATAGGCAATGTTCATCTGGGCTCCAGGCTGTCGCTGATGTAGCTGCTGCTATAAGGGCTGGGTTCTATGACATTGGTATTGGTGCCGGTTTGGAATCTATGACCACTAATCCAATGGGATGGGATGGATCAGTGAATCCTAAGGTAAAAATGTTTGAACAAGCACAAAACTGCCTTCTTCCTATGGGAATTACCTCTGAAAATGTTGCACAGCGCTTTGGGGTTTCAAGGAAGGAACAAGACCAGGCTGCAGTTGAGTCTCACAGGCGAGCTGCTGCAGCTACTGCTGCTGGTAAATTTAAAGATGAAATTGTCCCAGTTACCACCAAGATTGTGGACCCAAAAACCGGTGAGGAGAAATCTGTCACCATTTCTGTTGATGATGGAATTCGACCTGGCACAACAGTGTCTGATCTAGGAAGACTCAAACCTGTGTTCAAGAAAGACGGAAGCACCACTGCTGGTAATTCTAGCCAGGTGACCGATGGGGCTTCAGCTGTTCTGCTGATGAAAAGAAGTGTTGCATTGCAAAAGGGGCTACCCATTCTTGGTGTATTCAGGACTTTTGCAGCAGTTGGTGTTGATCCTGCCATCATGGGTGTTGGCCCTGCTGCTGCAATTCCTGTTGCTGTTAAGGCTGCAGGTCTAGAGCTTGATGATATTGATCTTTTTGAAATAAATGAGGCATTTGCCTCCCAGTTCGTGTATTGCCGTAACAAGCTAGGGCTTGATCCAGAAAAGATCAATGTTAATGGAGGTGCAATGGCAATTGGGCATCCTCTGGGTTCAACAGGTGCTCGATGTGTTGCAACTCTGTTGCATGAAATGAAGAAACGTGGCAGGGACTGTCGATTTGGAGTTATATCTATGTGCATAGGTACTGGAATGGGGGCAGCTGCTGTTTTTGAGAGTGGTGATTGTGCTGATGAGCTATGCAATGCCCGGAAAGTGGATGACCTTCTTTTATCCAAGGATGCTCGCTTGAAATAG

>Glyma.10g124700.2 sequence-type=CDS polypeptide=Glyma.10g124700.2.p locus=Glyma.10g124700 ID=Glyma.10g124700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGCATTTTATGCTGGTTTTCCCGAAACTGTGCCTGTTAGGACCGTTAATAGGCAATGTTCATCTGGGCTCCAGGCTGTCGCTGATGTAGCTGCTGCTATAAGGGCTGGGTTCTATGACATTGGTATTGGTGCCGGTTTGGAATCTATGACCACTAATCCAATGGGATGGGATGGATCAGTGAATCCTAAGGTAAAAATGTTTGAACAAGCACAAAACTGCCTTCTTCCTATGGGAATTACCTCTGAAAATGTTGCACAGCGCTTTGGGGTTTCAAGGAAGGAACAAGACCAGGCTGCAGTTGAGTCTCACAGGCGAGCTGCTGCAGCTACTGCTGCTGGTAAATTTAAAGATGAAATTGTCCCAGTTACCACCAAGATTGTGGACCCAAAAACCGGTGAGGAGAAATCTGTCACCATTTCTGTTGATGATGGAATTCGACCTGGCACAACAGTGTCTGATCTAGGAAGACTCAAACCTGTGTTCAAGAAAGACGGAAGCACCACTGCTGGTAATTCTAGCCAGGTGACCGATGGGGCTTCAGCTGTTCTGCTGATGAAAAGAAGTGTTGCATTGCAAAAGGGGCTACCCATTCTTGGTGTATTCAGGACTTTTGCAGCAGTTGGTGTTGATCCTGCCATCATGGGTGTTGGCCCTGCTGCTGCAATTCCTGTTGCTGTTAAGGCTGCAGGTCTAGAGCTTGATGATATTGATCTTTTTGAAATAAATGAGGCATTTGCCTCCCAGTTCGTGTATTGCCGTAACAAGCTAGGGCTTGATCCAGAAAAGATCAATGTTAATGGAGGTGCAATGGCAATTGGGCATCCTCTGGGTTCAACAGGTGCTCGATGTGTTGCAACTCTGTTGCATGAAATGAAGAAACGTGGCAGGGACTGTCGATTTGGAGTTATATCTATGTGCATAGGTACTGGAATGGGGGCAGCTGCTGTTTTTGAGAGTGGTGATTGTGCTGATGAGCTATGCAATGCCCGGAAAGTGGATGACCTTCTTTTATCCAAGGATGCTCGCTTGAAATAG

>Glyma.10g124700.3 sequence-type=CDS polypeptide=Glyma.10g124700.3.p locus=Glyma.10g124700 ID=Glyma.10g124700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAAAGCGATCAACAGACAGAAGATTTTGCTTCATCATCTCAACCCTTCATCATCCACCCACCCCAACGAATCATCCTCCCTCCATGCTTCAGCATGTGTGGCGGGGGATAGCGCTGCTTATCAAAGGACATCGACATTCGGGGACGATGTTGTGATCGTGGCTGCTTATCGGACTGCTCATTGCAAAGCTAAACGAGGTGGTTTCAAAGACACTCTTCCTGATGATCTACTGGCTCCTGTTTTGAAGGCTGTAATTGAGAAAACCAATGTGAACCCAAGTGAAGTTGGGGATATTGTTGTAGGTAGTGTATTGGCTCCTGGAGCTCAAAGAGCTAGTGAATGCCGAATGGCTGCATTTTATGCTGGTTTTCCCGAAACTGTGCCTGTTAGGACCGTTAATAGGCAATGTTCATCTGGGCTCCAGGCTGTCGCTGATGTAGCTGCTGCTATAAGGGCTGGGTTCTATGACATTGGTATTGGTGCCGGTTTGGAATCTATGACCACTAATCCAATGGGATGGGATGGATCAGTGAATCCTAAGGTAAAAATGTTTGAACAAGCACAAAACTGCCTTCTTCCTATGGGAATTACCTCTGAAAATGTTGCACAGCGCTTTGGGGTTTCAAGGAAGGAACAAGACCAGGCTGCAGTTGAGTCTCACAGGCGAGCTGCTGCAGCTACTGCTGCTGGTAAATTTAAAGATGAAATTGTCCCAGTTACCACCAAGATTGTGGACCCAAAAACCGGTGAGGAGAAATCTGTCACCATTTCTGTTGATGATGGAATTCGACCTGGCACAACAGTGTCTGATCTAGGAAGACTCAAACCTGTGTTCAAGAAAGACGGAAGCACCACTGCTGGTAATTCTAGCCAGGTGACCGATGGGGCTTCAGCTGTTCTGCTGATGAAAAGAAGTGTTGCATTGCAAAAGGGGCTACCCATTCTTGGTGTATTCAGGACTTTTGCAGCAGTTGGTGTTGATCCTGCCATCATGGGTGTTGGCCCTGCTGCTGCAATTCCTGTTGCTGTTAAGGCTGCAGGTCTAGAGCTTGATGATATTGATCTTTTTGAAATAAATGAGGCATTTGCCTCCCAGTTCGTGTATTGCCGTAACAAGCTAGGGCTTGATCCAGAAAAGATCAATGTTAATGGAGGTGCAATGGCAATTGGGCATCCTCTGGGTTCAACAGGTGTATACCACAACTTTCATTCTTACATTACAAATGCAACACTACCACCGCTGATTACAAAAGCATTCAGCTATTCTCGTTCATATATAAAATAA

Predicted protein sequences of Glyma.10g124700

Limit To All Plant Sequences

>Glyma.10g124700.1.p sequence-type=predicted peptide transcript=Glyma.10g124700.1 locus=Glyma.10g124700 ID=Glyma.10g124700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKAINRQKILLHHLNPSSSTHPNESSSLHASACVAGDSAAYQRTSTFGDDVVIVAAYRTAHCKAKRGGFKDTLPDDLLAPVLKAVIEKTNVNPSEVGDIVVGSVLAPGAQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTTNPMGWDGSVNPKVKMFEQAQNCLLPMGITSENVAQRFGVSRKEQDQAAVESHRRAAAATAAGKFKDEIVPVTTKIVDPKTGEEKSVTISVDDGIRPGTTVSDLGRLKPVFKKDGSTTAGNSSQVTDGASAVLLMKRSVALQKGLPILGVFRTFAAVGVDPAIMGVGPAAAIPVAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGSTGARCVATLLHEMKKRGRDCRFGVISMCIGTGMGAAAVFESGDCADELCNARKVDDLLLSKDARLK*

>Glyma.10g124700.2.p sequence-type=predicted peptide transcript=Glyma.10g124700.2 locus=Glyma.10g124700 ID=Glyma.10g124700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTTNPMGWDGSVNPKVKMFEQAQNCLLPMGITSENVAQRFGVSRKEQDQAAVESHRRAAAATAAGKFKDEIVPVTTKIVDPKTGEEKSVTISVDDGIRPGTTVSDLGRLKPVFKKDGSTTAGNSSQVTDGASAVLLMKRSVALQKGLPILGVFRTFAAVGVDPAIMGVGPAAAIPVAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGSTGARCVATLLHEMKKRGRDCRFGVISMCIGTGMGAAAVFESGDCADELCNARKVDDLLLSKDARLK*

>Glyma.10g124700.3.p sequence-type=predicted peptide transcript=Glyma.10g124700.3 locus=Glyma.10g124700 ID=Glyma.10g124700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKAINRQKILLHHLNPSSSTHPNESSSLHASACVAGDSAAYQRTSTFGDDVVIVAAYRTAHCKAKRGGFKDTLPDDLLAPVLKAVIEKTNVNPSEVGDIVVGSVLAPGAQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTTNPMGWDGSVNPKVKMFEQAQNCLLPMGITSENVAQRFGVSRKEQDQAAVESHRRAAAATAAGKFKDEIVPVTTKIVDPKTGEEKSVTISVDDGIRPGTTVSDLGRLKPVFKKDGSTTAGNSSQVTDGASAVLLMKRSVALQKGLPILGVFRTFAAVGVDPAIMGVGPAAAIPVAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGSTGVYHNFHSYITNATLPPLITKAFSYSRSYIK*

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