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Report for Sequence Feature Glyma.10g114500

Feature Type:gene_model
Chromosome:Gm10
Start:28601982
stop:28602599
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.10g114500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G56680.1AT Single-stranded nucleic acid binding R3H protein JGI N/AIEA
GO:0003676GO-mf nucleic acid binding EnsemblGenomesN/AIEA
PTHR15672Panther CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN JGI N/AIEA
PTHR15672:SF1Panther JGI N/AIEA

Expression Patterns of Glyma.10g114500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g114500 not represented in the dataset
Glyma.10g114500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.10g114500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g12810 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g114500
>Glyma.10g114500.1 sequence-type=CDS polypeptide=Glyma.10g114500.1.p locus=Glyma.10g114500 ID=Glyma.10g114500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGCTGGACATCCAGATGTTTTTGAATAATGCTGATCAACAACATTTTGAGTTTCAACATTTCCCTTCTTCCTATCTCCAATTGGTTGCACACCGTGTTGCTCAACACTACAACATGCAAAAAATGGTTCAAGATAATGCCTTAGATGGTCAGGGAAGTAAAATTCTGGTGTGGAAGTTACCAGAAACCAAGTATCCTGTGTTGGAAAATGATAAATCTGAGCAGAAAAAATTTGTTATTAGACCTAGGCCCAATAGAAACAGTTTGAATGATGCCAACGGAGTTGGGACGAAAGGAAATCCTGTAAGAAGTGTGGAAGAAAGGAAGGAGGAATATGACCGGGCGCGGGCATGTATCTTTAGTAGCCCTAGAAGCTCTGAATCAGGCGATACCTCATCCATGGTTCCAATGGACGGGAGAAATTCTTCTACTAGCAAGGATGAGAATGAAACTAGCAAGAACCCCATGGCTGATTCAAAAAGATATATCAGTGTCAGGGATAGTTGTTCGACTCGAGTTGCCATAGTCAGAGATAGGGAAAAGGATCATAGTGATCCAGATTATGACCGTAGTTATGGAAGGTGA
Predicted protein sequences of Glyma.10g114500
>Glyma.10g114500.1.p sequence-type=predicted peptide transcript=Glyma.10g114500.1 locus=Glyma.10g114500 ID=Glyma.10g114500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MELDIQMFLNNADQQHFEFQHFPSSYLQLVAHRVAQHYNMQKMVQDNALDGQGSKILVWKLPETKYPVLENDKSEQKKFVIRPRPNRNSLNDANGVGTKGNPVRSVEERKEEYDRARACIFSSPRSSESGDTSSMVPMDGRNSSTSKDENETSKNPMADSKRYISVRDSCSTRVAIVRDREKDHSDPDYDRSYGR*






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