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Report for Sequence Feature Glyma.10g114000

Feature Type:gene_model
Chromosome:Gm10
Start:28108356
stop:28108780
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.10g114000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G13440.1AT glucose-inhibited division family A protein JGI N/AIEA
GO:0002098GO-bp tRNA wobble uridine modification EnsemblGenomesN/AIEA
GO:0008033GO-bp tRNA processing EnsemblGenomesN/AIEA
GO:0008033GO-bp tRNA processing JGI N/AIEA
GO:0030488GO-bp tRNA methylation EnsemblGenomesN/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding EnsemblGenomesN/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding JGI N/AIEA
PTHR11806Panther GLUCOSE INHIBITED DIVISION PROTEIN A JGI N/AIEA
PF01134PFAM Glucose inhibited division protein A JGI N/AIEA
GN7V-66653SoyCyc9-rxn 5-carboxymethylaminomethyluridine-tRNA synthase Plant Metabolic Network ISS

Expression Patterns of Glyma.10g114000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g114000 not represented in the dataset
Glyma.10g114000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.10g114000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g13771 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g114000
>Glyma.10g114000.1 sequence-type=CDS polypeptide=Glyma.10g114000.1.p locus=Glyma.10g114000 ID=Glyma.10g114000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCTGGTAGGGGAGGGTAGCAATTTGAACTCCAGCACTCCAAACCTTTCTATTCGAGAGGCTATGGTCACAAATATTTTACTAGGGAAGAATGATAACGTGGAAGGTGTTTGTACATTCTTTGGAATGAAATTCTATGCTCCGTCTGTTATTCTCACCACAGGGACTTTTATGAGTGGTAAAATTTGGGTCGGTAGAACTTCTATGCCTGCAGGAAGAGTTGGCGAGTCTGCTTCACTTGGATTAACAAAAAACTTACAACGACTTGGTTTTGAAACTGATCGGTTGAAAAATGGAACCCCTGCCTGA
Predicted protein sequences of Glyma.10g114000
>Glyma.10g114000.1.p sequence-type=predicted peptide transcript=Glyma.10g114000.1 locus=Glyma.10g114000 ID=Glyma.10g114000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLVGEGSNLNSSTPNLSIREAMVTNILLGKNDNVEGVCTFFGMKFYAPSVILTTGTFMSGKIWVGRTSMPAGRVGESASLGLTKNLQRLGFETDRLKNGTPA*






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