Glyma.10g076100

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Report for Sequence Feature Glyma.10g076100

Feature Type:	gene_model
Chromosome:	Gm10
Start:	7918148
stop:	7921127
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.10g076100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G36080.1	AT	AP2/B3-like transcriptional factor family protein	JGI	N/A	IEA
GO:0006351	GO-bp	transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0006355	GO-bp	regulation of transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0003677	GO-mf	DNA binding	EnsemblGenomes	N/A	IEA
GO:0003677	GO-mf	DNA binding	JGI	N/A	IEA
PF02362	PFAM	B3 DNA binding domain	JGI	N/A	IEA

Proteins Associated with Glyma.10g076100

Locus	Gene Symbol	Protein Name
	B3	B3 domain protein

Expression Patterns of Glyma.10g076100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g076100 not represented in the dataset	Glyma.10g076100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.10g076100

Paralog	Evidence	Comments
Glyma.02g200500	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.10g076100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma10g08871	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.10g076100

Limit To All Plant Sequences

>Glyma.10g076100.1 sequence-type=CDS polypeptide=Glyma.10g076100.1.p locus=Glyma.10g076100 ID=Glyma.10g076100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCCATAAACCACTACTCCATGGACCTTCCCGAACCGACACTCTGGTGGCCACACCCACACCACCAACAACAACAACTAACCTTAATGGATCCTGACCCTCTCCGTCTCAACCTCAATAGCGACGATGGCAATGGCAATGACAACGACAACGACGAAAATCAAACAACCACAACAGGAGGAGAACAAGAAATATTAGACGATAAAGAACCGATGTTCGAGAAGCCCTTAACCCCGAGCGACGTGGGGAAGCTGAACCGTCTCGTAATCCCGAAGCAGCACGCGGAGAAGTACTTCCCACTGAGTGGTGACTCGGGCGGGAGCGAGTGCAAGGGGCTGTTACTGAGTTTCGAGGACGAGTCGGGGAAGTGTTGGCGCTTCCGCTACTCGTACTGGAACAGCAGCCAGAGCTACGTGCTCACCAAAGGGTGGAGCCGCTACGTCAAGGACAAGCGCCTTGACGCGGGCGACGTCGTTTTGTTCGAGCGTCACCGCGTCGACGCGCAGCGCCTCTTCATCGGGTGGAGGCGCAGGCGGCAGAGCGATGCCGCCTTGCCGCCTGCGCACGTTAGCAGTAGGAAGAGTGGTGGTGGTGATGGGAATAGTAATAAGAATGAGGGGTGGACCAGAGGGTTCTATTCTGCGCATCATCCTTATCCTACGCATCATCTTCATCATCATCAGCCCTCGCCATACCAACAACAACATGACTGTCTTCATGCAGGTAGAGGGTCCCAAGGTCAGAACCAAAGGATGAGACCAGTGGGAAACAACAGTTCTAGCTCTAGTTCGAGTTCAAGGGTACTTAGGCTGTTCGGGGTCGACATGGAATGCCAACCCGAACATGATGATTCTGGTCCCTCCACACCCCAATGCTCCTACAATAGTAACAACATGTTGCCATCAACACAGGGCACAGATCATTCCCATCACAATTTCTACCAACAGCAACCTTCTAATTCCAATCCTTCCCCTCATCACATGATGGTACATCACCAACCATACTACTACTAG

Predicted protein sequences of Glyma.10g076100

Limit To All Plant Sequences

>Glyma.10g076100.1.p sequence-type=predicted peptide transcript=Glyma.10g076100.1 locus=Glyma.10g076100 ID=Glyma.10g076100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSINHYSMDLPEPTLWWPHPHHQQQQLTLMDPDPLRLNLNSDDGNGNDNDNDENQTTTTGGEQEILDDKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGDSGGSECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRVDAQRLFIGWRRRRQSDAALPPAHVSSRKSGGGDGNSNKNEGWTRGFYSAHHPYPTHHLHHHQPSPYQQQHDCLHAGRGSQGQNQRMRPVGNNSSSSSSSSRVLRLFGVDMECQPEHDDSGPSTPQCSYNSNNMLPSTQGTDHSHHNFYQQQPSNSNPSPHHMMVHHQPYYY*

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