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Report for Sequence Feature Glyma.10g071000

Feature Type:gene_model
Chromosome:Gm10
Start:7144985
stop:7148990
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.10g071000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G52820.1AT purple acid phosphatase 22 JGI N/AIEA
GO:0016311GO-bp dephosphorylation EnsemblGenomesN/AIEA
GO:0003993GO-mf acid phosphatase activity EnsemblGenomesN/AIEA
GO:0005515GO-mf protein binding EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity JGI N/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
KOG1378 KOG Purple acid phosphatase JGI N/AIEA
PTHR22953Panther ACID PHOSPHATASE RELATED JGI N/AIEA
PF00149PFAM Calcineurin-like phosphoesterase JGI N/AIEA
PWY-6348SoyCyc9 phosphate acquisition Plant Metabolic Network ISS
GN7V-43313SoyCyc9-rxn acid phosphatase Plant Metabolic Network ISS

Proteins Associated with Glyma.10g071000
LocusGene SymbolProtein Name
PAP22 purple acid phosphatase 22-like

Expression Patterns of Glyma.10g071000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.10g071000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g08300 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g071000
>Glyma.10g071000.1 sequence-type=CDS polypeptide=Glyma.10g071000.1.p locus=Glyma.10g071000 ID=Glyma.10g071000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAAAATGTAACAAGTCTCTTGTCGTGATTCTCCTCCTCCTTCACATCCTATGCTTGCAATCACAAGTGAATGGTTTTTCTCGTCAACCTTCTCGCCAGTTAATCTTCACACCCCACAAACGTTCGGATTCTGATCCTCAACAGGTGCACATTTCGTTGGTGGGCAATGATCATATGAGGGTGTCATGGATAACCGATGACAAACACTCAGAATCTGTGGTGGAGTATGGAACAAAGAAAGGTGAATATAGCACAAAAGCAACGGGGGAACACACTTCATACCATTATTTCTTGTACGAATCCGGCAAGATCCACCATGTGGTAATTGGGCCTCTTCAGCCCAACACAATTTACTACTACAGGTGCGGAGGATCGGGTTCTGAGTTTTCCTTCAAGACACCTCCACTAAAGTTGCCTATTGAATTTGTTGTCGTTGGGGATTTGGGACAAACTGAATGGACAACATCAACCCTAAAACATGTGGATAGCAAAGACTATGATGTGTTTCTACTACCTGGAGATCTATCCTATGCTGATACCCATCAACCTCTATGGGACTCCTTTGGTCGTTTGGTGGAACCCTACGCTAGTCGTATACCATGGATGGTTACAGAAGGCAACCATGAAATCGAAACTTTCCCCATTATCCAACCAAATGGTTTCAAGGCCTACAATGCTCGTTGGCCCATGCCATACAAGGAAAGTGGCTCCACCTCAAACCTCTATTACTCATTTGATGTTGCTAGCACCCACGTCATCATGTTGGGCTCTTACACAGATTTTGATGCACACTCCCAACAATACACGTGGCTTCAATCTGACCTAGCTAAGATTGATAGGAAGAGGACGCCTTGGGTGATTGCATTGTTGCATGCACCTTGGTATAATACTAATGAGGCACATCAAGGTGAAGGTGAAGACATGAGACAGGCCATGGAAGAGTTGCTTTATGAAGCTCGTGTTGACTTGGTCTTTGCTGGCCATGTTCATGCATATGAACGCTTTACTCGAATTTATGACAATAAGGCTGATTCATGTGGTCCGTTGTTTAAGAAGCCTCCTAGCCCACTTTCTTTGTATCGGGAGCCAAGCTTTGGTCATGGAAGGTTGAGAATAGTGAACGAAACACATGCATATTGGTCGTGGCATCGCAACAATGACACCGACACATTTGTAGCTGATGGTGTTTGGATTGAGAGTTTAAGCAACTCGAAAGCTTGCTGGAATGCACAAGGCCAGCATGTTGCTCATGAAGAGCTTTGA
Predicted protein sequences of Glyma.10g071000
>Glyma.10g071000.1.p sequence-type=predicted peptide transcript=Glyma.10g071000.1 locus=Glyma.10g071000 ID=Glyma.10g071000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAKCNKSLVVILLLLHILCLQSQVNGFSRQPSRQLIFTPHKRSDSDPQQVHISLVGNDHMRVSWITDDKHSESVVEYGTKKGEYSTKATGEHTSYHYFLYESGKIHHVVIGPLQPNTIYYYRCGGSGSEFSFKTPPLKLPIEFVVVGDLGQTEWTTSTLKHVDSKDYDVFLLPGDLSYADTHQPLWDSFGRLVEPYASRIPWMVTEGNHEIETFPIIQPNGFKAYNARWPMPYKESGSTSNLYYSFDVASTHVIMLGSYTDFDAHSQQYTWLQSDLAKIDRKRTPWVIALLHAPWYNTNEAHQGEGEDMRQAMEELLYEARVDLVFAGHVHAYERFTRIYDNKADSCGPLFKKPPSPLSLYREPSFGHGRLRIVNETHAYWSWHRNNDTDTFVADGVWIESLSNSKACWNAQGQHVAHEEL*






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