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Report for Sequence Feature Glyma.10g064800

Feature Type:gene_model
Chromosome:Gm10
Start:6178462
stop:6183190
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.10g064800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G53000.1AT phloem protein 2-A15 JGI N/AIEA
GO:0005515GO-mf protein binding EnsemblGenomesN/AIEA

Expression Patterns of Glyma.10g064800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.10g064800
ParalogEvidenceComments
Glyma.13g149600 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.10g064800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g07450 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.10g064800
>Glyma.10g064800.2 sequence-type=transcript locus=Glyma.10g064800 ID=Glyma.10g064800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GCAAAAGCTATCCACCAACAACAAACAACTCTTCTTACATGCAACACCAACATCACTAACGCATTTTCAATTTTCAGTATATTTTCACTCCCACGCGCGCTTACTTCCTCCCTTCCCCTCGGCGCGTGCCATGGGCGCGTCGCTGTCGTCGAACGGTTCGAGCATCGGCCCGGGCCTCGGGGACATACCGGAGAGCTGCGTGGCGTGTGTGTTCCTCCACCTGACGCCGCCGGAGATCTGCAACCTCGCCCGCCTCAACCGCGCCTTTCGCGGCGCCGCCTCGTCGGACTCTGTCTGGGAGGCGAAGCTGCCGCGCAACTACCAGGATCTGCTAGATCTCGTGCCGCCGCCGGAGCGCCATCACCGCAGCCTCTCGAAAAAGGACATATTCGCGCTCCTCTCCCGCCCCCTCCCCTTCGACCACGGCCATAAGGAAGTGTGGCTGGACAGAGTCACCGGGAAGGTTTGCATGTCCATTTCGGCGAAGGCGATGGTGATTACCGGCATTGATGACCGGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGTTTCACACTGTGGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTTTCGTTTCCATTTCCTGCTGATATTTATACTCTCTCCTTTCGACTTCACCTTGGACGGTTTTCCAAAAGGCTAGGGCGGCGTGTTTGCAATTATGATCACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTTTCTACTTCAGATGGTCAGCAAGCATCATGTGAATGCTGTCTGGATGAAACTGAGATTGATGATACATATGGCAATCATAAGCGTGGATACTGGGTAGATTACAAGGTGGGCGAGTTTATTGTCAGTGGATCGGAGCCTACAACTCAAGTTAGATTTTCCATGAAACAGATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATGCTGTATTTATTGTACCTAGTGATTTGAGAGAGCGAAAGAGAAGAGGCATTTTGAAATAGCCATGTGCAGAATAGGAAGCTTATTTTTTTAGTGGTGTCAGACATCCTAGAATACTCACTCTATTGGGGATCTATCACACAGCAGCTTATACACTGAAAAAAGTTTACAATTTGGAGAATGTCATAAttttctgttttttttttaattttttaattttttttGCCAGTAGGTGTGTATTCTCTATAGCTTTGTAATTATAATTTCTATTCAATGTATTTTAGTTGTTTCCACATTAGGCTGTTAAATTTATTTGTTTCGAGGAAAAAAGAACTTTGCCCTTGCCTGCCTCGGTTGTTCTTTATGCCTTCCGAAACTTGGTTGAGTCGGTCATAAATGTTGAAACCGTGTTATATAGTACAATGTAGTTATTTTGTTTAAGGCATT

>Glyma.10g064800.3 sequence-type=transcript locus=Glyma.10g064800 ID=Glyma.10g064800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GCAAAAGCTATCCACCAACAACAAACAACTCTTCTTACATGCAACACCAACATCACTAACGCATTTTCAATTTTCAGTATATTTTCACTCCCACGCGCGCTTACTTCCTCCCTTCCCCTCGGCGCGTGCCATGGGCGCGTCGCTGTCGTCGAACGGTTCGAGCATCGGCCCGGGCCTCGGGGACATACCGGAGAGCTGCGTGGCGTGTGTGTTCCTCCACCTGACGCCGCCGGAGATCTGCAACCTCGCCCGCCTCAACCGCGCCTTTCGCGGCGCCGCCTCGTCGGACTCTGTCTGGGAGGCGAAGCTGCCGCGCAACTACCAGGATCTGCTAGATCTCGTGCCGCCGCCGGAGCGCCATCACCGCAGCCTCTCGAAAAAGGACATATTCGCGCTCCTCTCCCGCCCCCTCCCCTTCGACCACGGCCATAAGGAAGTGTGGCTGGACAGAGTCACCGGGAAGGTTTGCATGTCCATTTCGGCGAAGGCGATGGTGATTACCGGCATTGATGACCGGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGGGTGGCACCTAGTATTCCTTGGGGAAGATCCTCAAATTTTTATATTTCTTATTTTTCACTGCAAATTTTAAATTTGACCCCTAGCCATTTCAACCAAGCTCCACCCTCTGATCATGTATTGTTTCACACTGTGGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTTTCGTTTCCATTTCCTGCTGATATTTATACTCTCTCCTTTCGACTTCACCTTGGACGGTTTTCCAAAAGGCTAGGGCGGCGTGTTTGCAATTATGATCACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTTTCTACTTCAGATGGTCAGCAAGCATCATGTGAATGCTGTCTGGATGAAACTGAGATTGATGATACATATGGCAATCATAAGCGTGGATACTGGGTAGATTACAAGGTGGGCGAGTTTATTGTCAGTGGATCGGAGCCTACAACTCAAGTTAGATTTTCCATGAAACAGATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATGCTGTATTTATTGTACCTAGTGATTTGAGAGAGCGAAAGAGAAGAGGCATTTTGAAATAGCCATGTGCAGAATAGGAAGCTTATTTTTTTAGTGGTGTCAGACATCCTAGAATACTCACTCTATTGGGGATCTATCACACAGCAGCTTATACACTGAAAAAAGTTTACAATTTGGAGAATGTCATAAttttctgttttttttttaattttttaattttttttGCCAGTAGGTGTGTATTCTCTATAGCTTTGTAATTATAATTTCTATTCAATGTATTTTAGTTGTTTCCACATTAGGCTGTTAAATTTATTTGTTTCGAGGAAAAAAGAACTTTGCCCTTGCCTGCCTCGGTTGTTCTTTATGCCTTCCGAAACTTGGTTGAGTCGGTCATAAATGTTGAAACCGTGTTATATAGTACAATGTAGTTATTTTGTTTAAGGCATT

>Glyma.10g064800.4 sequence-type=transcript locus=Glyma.10g064800 ID=Glyma.10g064800.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
GCAAAAGCTATCCACCAACAACAAACAACTCTTCTTACATGCAACACCAACATCACTAACGCATTTTCAATTTTCAGTATATTTTCACTCCCACGCGCGCTTACTTCCTCCCTTCCCCTCGGCGCGTGCCATGGGCGCGTCGCTGTCGTCGAACGGTTCGAGCATCGGCCCGGGCCTCGGGGACATACCGGAGAGCTGCGTGGCGTGTGTGTTCCTCCACCTGACGCCGCCGGAGATCTGCAACCTCGCCCGCCTCAACCGCGCCTTTCGCGGCGCCGCCTCGTCGGACTCTGTCTGGGAGGCGAAGCTGCCGCGCAACTACCAGGATCTGCTAGATCTCGTGCCGCCGCCGGAGCGCCATCACCGCAGCCTCTCGAAAAAGGACATATTCGCGCTCCTCTCCCGCCCCCTCCCCTTCGACCACGGCCATAAGGTGGGTGTTGCACTTCAGGAAGTGTGGCTGGACAGAGTCACCGGGAAGGTTTGCATGTCCATTTCGGCGAAGGCGATGGTGATTACCGGCATTGATGACCGGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGGGTGGCACCTAGTATTCCTTGGGGAAGATCCTCAAATTTTTATATTTCTTATTTTTCACTGCAAATTTTAAATTTGACCCCTAGCCATTTCAACCAAGCTCCACCCTCTGATCATGTATTGTTTCACACTGTGGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTTTCGTTTCCATTTCCTGCTGATATTTATACTCTCTCCTTTCGACTTCACCTTGGACGGTTTTCCAAAAGGCTAGGGCGGCGTGTTTGCAATTATGATCACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTTTCTACTTCAGATGGTCAGCAAGCATCATGTGAATGCTGTCTGGATGAAACTGAGATTGATGATACATATGGCAATCATAAGCGTGGATACTGGGTAGATTACAAGGTGGGCGAGTTTATTGTCAGTGGATCGGAGCCTACAACTCAAGTTAGATTTTCCATGAAACAGATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATGCTGTATTTATTGTACCTAGTGATTTGAGAGAGCGAAAGAGAAGAGGCATTTTGAAATAGCCATGTGCAGAATAGGAAGCTTATTTTTTTAGTGGTGTCAGACATCCTAGAATACTCACTCTATTGGGGATCTATCACACAGCAGCTTATACACTGAAAAAAGTTTACAATTTGGAGAATGTCATAAttttctgttttttttttaattttttaattttttttGCCAGTAGGTGTGTATTCTCTATAGCTTTGTAATTATAATTTCTATTCAATGTATTTTAGTTGTTTCCACATTAGGCTGTTAAATTTATTTGTTTCGAGGAAAAAAGAACTTTGCCCTTGCCTGCCTCGGTTGTTCTTTATGCCTTCCGAAACTTGGTTGAGTCGGTCATAAATGTTGAAACCGTGTTATATAGTACAATGTAGTTATTTTGTTTAAGGCATT
Coding sequences of Glyma.10g064800
>Glyma.10g064800.1 sequence-type=CDS polypeptide=Glyma.10g064800.1.p locus=Glyma.10g064800 ID=Glyma.10g064800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGCGCGTCGCTGTCGTCGAACGGTTCGAGCATCGGCCCGGGCCTCGGGGACATACCGGAGAGCTGCGTGGCGTGTGTGTTCCTCCACCTGACGCCGCCGGAGATCTGCAACCTCGCCCGCCTCAACCGCGCCTTTCGCGGCGCCGCCTCGTCGGACTCTGTCTGGGAGGCGAAGCTGCCGCGCAACTACCAGGATCTGCTAGATCTCGTGCCGCCGCCGGAGCGCCATCACCGCAGCCTCTCGAAAAAGGACATATTCGCGCTCCTCTCCCGCCCCCTCCCCTTCGACCACGGCCATAAGGTGGGTGTTGCACTTCAGGAAGTGTGGCTGGACAGAGTCACCGGGAAGGTTTGCATGTCCATTTCGGCGAAGGCGATGGTGATTACCGGCATTGATGACCGGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGTTTCACACTGTGGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTTTCGTTTCCATTTCCTGCTGATATTTATACTCTCTCCTTTCGACTTCACCTTGGACGGTTTTCCAAAAGGCTAGGGCGGCGTGTTTGCAATTATGATCACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTTTCTACTTCAGATGGTCAGCAAGCATCATGTGAATGCTGTCTGGATGAAACTGAGATTGATGATACATATGGCAATCATAAGCGTGGATACTGGGTAGATTACAAGGTGGGCGAGTTTATTGTCAGTGGATCGGAGCCTACAACTCAAGTTAGATTTTCCATGAAACAGATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATGCTGTATTTATTGTACCTAGTGATTTGAGAGAGCGAAAGAGAAGAGGCATTTTGAAATAG

>Glyma.10g064800.2 sequence-type=CDS polypeptide=Glyma.10g064800.2.p locus=Glyma.10g064800 ID=Glyma.10g064800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGCGCGTCGCTGTCGTCGAACGGTTCGAGCATCGGCCCGGGCCTCGGGGACATACCGGAGAGCTGCGTGGCGTGTGTGTTCCTCCACCTGACGCCGCCGGAGATCTGCAACCTCGCCCGCCTCAACCGCGCCTTTCGCGGCGCCGCCTCGTCGGACTCTGTCTGGGAGGCGAAGCTGCCGCGCAACTACCAGGATCTGCTAGATCTCGTGCCGCCGCCGGAGCGCCATCACCGCAGCCTCTCGAAAAAGGACATATTCGCGCTCCTCTCCCGCCCCCTCCCCTTCGACCACGGCCATAAGGAAGTGTGGCTGGACAGAGTCACCGGGAAGGTTTGCATGTCCATTTCGGCGAAGGCGATGGTGATTACCGGCATTGATGACCGGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGTTTCACACTGTGGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTTTCGTTTCCATTTCCTGCTGATATTTATACTCTCTCCTTTCGACTTCACCTTGGACGGTTTTCCAAAAGGCTAGGGCGGCGTGTTTGCAATTATGATCACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTTTCTACTTCAGATGGTCAGCAAGCATCATGTGAATGCTGTCTGGATGAAACTGAGATTGATGATACATATGGCAATCATAAGCGTGGATACTGGGTAGATTACAAGGTGGGCGAGTTTATTGTCAGTGGATCGGAGCCTACAACTCAAGTTAGATTTTCCATGAAACAGATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATGCTGTATTTATTGTACCTAGTGATTTGAGAGAGCGAAAGAGAAGAGGCATTTTGAAATAG

>Glyma.10g064800.3 sequence-type=CDS polypeptide=Glyma.10g064800.3.p locus=Glyma.10g064800 ID=Glyma.10g064800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACCGGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGGGTGGCACCTAGTATTCCTTGGGGAAGATCCTCAAATTTTTATATTTCTTATTTTTCACTGCAAATTTTAAATTTGACCCCTAGCCATTTCAACCAAGCTCCACCCTCTGATCATGTATTGTTTCACACTGTGGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTTTCGTTTCCATTTCCTGCTGATATTTATACTCTCTCCTTTCGACTTCACCTTGGACGGTTTTCCAAAAGGCTAGGGCGGCGTGTTTGCAATTATGATCACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTTTCTACTTCAGATGGTCAGCAAGCATCATGTGAATGCTGTCTGGATGAAACTGAGATTGATGATACATATGGCAATCATAAGCGTGGATACTGGGTAGATTACAAGGTGGGCGAGTTTATTGTCAGTGGATCGGAGCCTACAACTCAAGTTAGATTTTCCATGAAACAGATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATGCTGTATTTATTGTACCTAGTGATTTGAGAGAGCGAAAGAGAAGAGGCATTTTGAAATAG

>Glyma.10g064800.4 sequence-type=CDS polypeptide=Glyma.10g064800.4.p locus=Glyma.10g064800 ID=Glyma.10g064800.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACCGGAGATACTGGAATTGGATTCCTACTGAAGAATCTAGGGGTGGCACCTAGTATTCCTTGGGGAAGATCCTCAAATTTTTATATTTCTTATTTTTCACTGCAAATTTTAAATTTGACCCCTAGCCATTTCAACCAAGCTCCACCCTCTGATCATGTATTGTTTCACACTGTGGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGTTTCGTTTCCATTTCCTGCTGATATTTATACTCTCTCCTTTCGACTTCACCTTGGACGGTTTTCCAAAAGGCTAGGGCGGCGTGTTTGCAATTATGATCACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAGTTTTCTACTTCAGATGGTCAGCAAGCATCATGTGAATGCTGTCTGGATGAAACTGAGATTGATGATACATATGGCAATCATAAGCGTGGATACTGGGTAGATTACAAGGTGGGCGAGTTTATTGTCAGTGGATCGGAGCCTACAACTCAAGTTAGATTTTCCATGAAACAGATCGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATGCTGTATTTATTGTACCTAGTGATTTGAGAGAGCGAAAGAGAAGAGGCATTTTGAAATAG
Predicted protein sequences of Glyma.10g064800
>Glyma.10g064800.1.p sequence-type=predicted peptide transcript=Glyma.10g064800.1 locus=Glyma.10g064800 ID=Glyma.10g064800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGASLSSNGSSIGPGLGDIPESCVACVFLHLTPPEICNLARLNRAFRGAASSDSVWEAKLPRNYQDLLDLVPPPERHHRSLSKKDIFALLSRPLPFDHGHKVGVALQEVWLDRVTGKVCMSISAKAMVITGIDDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVSFPFPADIYTLSFRLHLGRFSKRLGRRVCNYDHTHGWDIKPVKFEFSTSDGQQASCECCLDETEIDDTYGNHKRGYWVDYKVGEFIVSGSEPTTQVRFSMKQIDCTHSKGGLCVDAVFIVPSDLRERKRRGILK*

>Glyma.10g064800.2.p sequence-type=predicted peptide transcript=Glyma.10g064800.2 locus=Glyma.10g064800 ID=Glyma.10g064800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGASLSSNGSSIGPGLGDIPESCVACVFLHLTPPEICNLARLNRAFRGAASSDSVWEAKLPRNYQDLLDLVPPPERHHRSLSKKDIFALLSRPLPFDHGHKEVWLDRVTGKVCMSISAKAMVITGIDDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVSFPFPADIYTLSFRLHLGRFSKRLGRRVCNYDHTHGWDIKPVKFEFSTSDGQQASCECCLDETEIDDTYGNHKRGYWVDYKVGEFIVSGSEPTTQVRFSMKQIDCTHSKGGLCVDAVFIVPSDLRERKRRGILK*

>Glyma.10g064800.3.p sequence-type=predicted peptide transcript=Glyma.10g064800.3 locus=Glyma.10g064800 ID=Glyma.10g064800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTGDTGIGFLLKNLGVAPSIPWGRSSNFYISYFSLQILNLTPSHFNQAPPSDHVLFHTVAYLQQIWWFEVDGEVSFPFPADIYTLSFRLHLGRFSKRLGRRVCNYDHTHGWDIKPVKFEFSTSDGQQASCECCLDETEIDDTYGNHKRGYWVDYKVGEFIVSGSEPTTQVRFSMKQIDCTHSKGGLCVDAVFIVPSDLRERKRRGILK*

>Glyma.10g064800.4.p sequence-type=predicted peptide transcript=Glyma.10g064800.4 locus=Glyma.10g064800 ID=Glyma.10g064800.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTGDTGIGFLLKNLGVAPSIPWGRSSNFYISYFSLQILNLTPSHFNQAPPSDHVLFHTVAYLQQIWWFEVDGEVSFPFPADIYTLSFRLHLGRFSKRLGRRVCNYDHTHGWDIKPVKFEFSTSDGQQASCECCLDETEIDDTYGNHKRGYWVDYKVGEFIVSGSEPTTQVRFSMKQIDCTHSKGGLCVDAVFIVPSDLRERKRRGILK*






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