Glyma.10g060100

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Report for Sequence Feature Glyma.10g060100

Feature Type:	gene_model
Chromosome:	Gm10
Start:	5577340
stop:	5582963
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.10g060100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G53180.1	AT	glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases	JGI	N/A	IEA
GO:0008152	GO-bp	metabolic process	JGI	N/A	IEA
GO:0003824	GO-mf	catalytic activity	JGI	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	EnsemblGenomes	N/A	IEA
GO:0016888	GO-mf	endodeoxyribonuclease activity, producing 5'-phosphomonoesters	JGI	N/A	IEA
PTHR20852	Panther	GLUTAMINE SYNTHETASE	JGI	N/A	IEA
PTHR20852:SF8	Panther		JGI	N/A	IEA
PF04909	PFAM	Amidohydrolase	JGI	N/A	IEA

Proteins Associated with Glyma.10g060100

Locus	Gene Symbol	Protein Name
	N6L	nodulin 6l

Expression Patterns of Glyma.10g060100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g060100 not represented in the dataset	Glyma.10g060100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.10g060100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma10g06810	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.10g060100

Limit To All Plant Sequences

>Glyma.10g060100.2 sequence-type=transcript locus=Glyma.10g060100 ID=Glyma.10g060100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGGGGTAACAGACATGCTTTTGGCCGATTACACGTTCCTTAATTTCATGCGCATTTGATCGTTCTCTAACCACCGCTGTCTCACTCATAGTCCTCTTGATTATCTCAATCCTCTGCAACCTTAAAGGACTCGAACATTCTTCACTGGTAGAGGGAGAGGGAATGGATTTCAGCGAGCTGAGAAAAGCAGTGGAGGAGGTTGAACTGGTGGATGGTCACTCCCATAACATAGTTGCCCTAAACTCCACCTCCATCTCCGGTTTTGTTCAGGCCTTTACTGTGGGAGCCTTTGTTGATGCTGATGCCATTGCTTTTGCACAAACCTCTCTATCCTTCAAGAGAAGTTTGAGAGATGTTGCTGAGCTATACGGAACCGAGGTATCTTTGCAAGGTGTAGAGGAATACCGTAAAGCGTCTGGAATAGAATCCATCAGCTCAACATGCCTCAAAGCTGCAAAATTCTCCGCCATACTCATTGATGATGGCATAGAAATGGACAAAAAGCATGACATGCAATGGCACAAAAATTTTACACCTTTTGTTGGCAGAATCTTAAGAACTGAACGTGTGGCCGAGCAAATCCTTGAACAAGGTTTGCCTAATGGATCTTCATGGACAATCGATTCATTTACTGAAGCATATGTCTCAAAGGTTAAATCAGTTGCTAAAGAGATCCATGCTTTGAAAAGCATAGCTGCATACTACGGTGGCTTAGAAATCAATTTAAATGTGACTAAAACGGATGCTGAGGAGAGTCTGAAAGAGGTGTTAACAAATACTACGAAACCTATTTTTCTACTAAAATACAAAAATTACAAAAATCTTGTTGACTACCTCTTCTTGCAAAGTTTGGAAATTGCTCTATCTTATGACTTGCCAATGCAGATACACACAGGCTTTGGGGATAGACTTTTGGATTTGAGGAAGACCAATCCTCTTCATCTCCGTTCAGTTCTTGAGGACAAGAGATATTCAAAGTGTCGGTTTGTTTTGTTACATGCATCTCATCCATACTCAAAGGAAGCATCATATCTAGCTTCTGTTTACTCCCAGGTTTACCTTGATTTTGGGTTGGCAATTCCAAAGCTTAGTGTACATGGGATGACTTCTGCAGTCAAAGATTTGCTAAATCTGGCTCCATTAGATAAGGTGATGTTCAGCACTGATGCCTATACATTTCCTGAAACCTTCTACCTAGGTGCAAAGAATTCTCGCGAAGTTGTTTTCTCTGTTCTGCATGATGCATGCATTGATGGTGAGCTCTCAATTCCTGAGGCTGTGGAAGCTGCAAAAGACATCCTTGCAAGAAATGCGATCCGCTTCTATAAGATTAGTTCACCCAACAATGCTGGCCCTCCTTAGTTTTTTTTTTTATTATTAAAGTGTCCCTGGAAGAACACGAACCCACAACCTTTCTCTTTTCTCTTCACTCTTTATCAACAACGGGATCATCCTTATATCTCCGAGGATAATTCAATAAAGTAATCATGTTGCATAATCGAAATGTTGAATACTTCTAGCTGCATTTATAATGTCATAACAATTAAACAATTCGTGAATTATTATGTCCACAATGATATATACTCGTTTATAAAACATCAATTATGATTTGTGTTTTGTTT

>Glyma.10g060100.3 sequence-type=transcript locus=Glyma.10g060100 ID=Glyma.10g060100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTCATTTCTTTCATTTTTATTTGCCTTTTCTTTGAAGAAAACCCTCCTCTTACTGGCCTTCTCTTTCTTTTCTCTCCGCCATGGATATCTCATTGCCATTCACAGTCCTCTTGATTATCTCAATCCTCTGCAACCTTAAAGGACTCGAACATTCTTCACTGGTAGAGGGAGAGGGAATGGATTTCAGCGAGCTGAGAAAAGCAGTGGAGGAGGTTGAACTGGTGGATGGTCACTCCCATAACATAGTTGCCCTAAACTCCACCTCCATCTCCGGTTTTGTTCAGGCCTTTACTGTGGGAGCCTTTGTTGATGCTGATGCCATTGCTTTTGCACAAACCTCTCTATCCTTCAAGAGAAGTTTGAGAGATGTTGCTGAGCTATACGGAACCGAGGTATCTTTGCAAGGTGTAGAGGAATACCGTAAAGCGTCTGGAATAGAATCCATCAGCTCAACATGCCTCAAAGCTGCAAAATTCTCCGCCATACTCATTGATGATGGCATAGAAATGGACAAAAAGCATGACATGCAATGGCACAAAAATTTTACACCTTTTGTTGGCAGAATCTTAAGAACTGAACGTGTGGCCGAGCAAATCCTTGAACAAGGTTTGCCTAATGGATCTTCATGGACAATCGATTCATTTACTGAAGCATATGTCTCAAAGGTTAAATCAGTTGCTAAAGAGATCCATGCTTTGAAAAGCATAGCTGCATACTACGGTGGCTTAGAAATCAATTTAAATGTGACTAAAACGGATGCTGAGGAGAGTCTGAAAGAGGTGTTAACAAATACTACGAAACCTATTTTTCTACTAAAATACAAAAATTACAAAAATCTTGTTGACTACCTCTTCTTGCAAAGTTTGGAAATTGCTCTATCTTATGACTTGCCAATGCAGATACACACAGGCTTTGGGGATAGACTTTTGGATTTGAGGAAGACCAATCCTCTTCATCTCCGTTCAGTTCTTGAGGACAAGAGATATTCAAAGTGTCGGTTTGTTTTGTTACATGCATCTCATCCATACTCAAAGGAAGCATCATATCTAGCTTCTGTTTACTCCCAGGTTTACCTTGATTTTGGGTTGGCAATTCCAAAGCTTAGTGTACATGGGATGACTTCTGCAGTCAAAGATTTGCTAAATCTGGCTCCATTAGATAAGGTGATGTTCAGCACTGATGCCTATACATTTCCTGAAACCTTCTACCTAGGTGCAAAGAATTCTCGCGAAGTTGTTTTCTCTGTTCTGCATGATGCATGCATTGATGGTGAGCTCTCAATTCCTGAGGCTGTGGAAGCTGCAAAAGACATCCTTGCAAGAAATGCGATCCGCTTCTATAAGATTAGTTCACCCAACAATGCTGGCCCTCCTTAGTTTTTTTTTTTATTATTAAAGTGTCCCTGGAAGAACACGAACCCACAACCTTTCTCTTTTCTCTTCACTCTTTATCAACAACGGGATCATCCTTATATCTCCGAGGATAATTCAATAAAGTAATCATGTTGCATAATCGAAATGTTGAATACTTCTAGCTGCATTTATAATGTCATAACAATTAAACAATTCGTGAATTATTATGTCCACAATGATATATACTCGTTTATAAAACATCAATTATGATTTGTGTTTTGTTT

Coding sequences of Glyma.10g060100

Limit To All Plant Sequences

>Glyma.10g060100.1 sequence-type=CDS polypeptide=Glyma.10g060100.1.p locus=Glyma.10g060100 ID=Glyma.10g060100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATATCTCATTGCCATTCACAGTCCTCTTGATTATCTCAATCCTCTGCAACCTTAAAGGACTCGAACATTCTTCACTGGTAGAGGGAGAGGGAATGGATTTCAGCGAGCTGAGAAAAGCAGTGGAGGAGGTTGAACTGGTGGATGGTCACTCCCATAACATAGTTGCCCTAAACTCCACCTCCATCTCCGGTTTTGTTCAGGCCTTTACTGTGGGAGCCTTTGTTGATGCTGATGCCATTGCTTTTGCACAAACCTCTCTATCCTTCAAGAGAAGTTTGAGAGATGTTGCTGAGCTATACGGAACCGAGGTATCTTTGCAAGGTGTAGAGGAATACCGTAAAGCGTCTGGAATAGAATCCATCAGCTCAACATGCCTCAAAGCTGCAAAATTCTCCGCCATACTCATTGATGATGGCATAGAAATGGACAAAAAGCATGACATGCAATGGCACAAAAATTTTACACCTTTTGTTGGCAGAATCTTAAGAACTGAACGTGTGGCCGAGCAAATCCTTGAACAAGGTTTGCCTAATGGATCTTCATGGACAATCGATTCATTTACTGAAGCATATGTCTCAAAGGTTAAATCAGTTGCTAAAGAGATCCATGCTTTGAAAAGCATAGCTGCATACTACGGTGGCTTAGAAATCAATTTAAATGTGACTAAAACGGATGCTGAGGAGAGTCTGAAAGAGGTGTTAACAAATACTACGAAACCTATTTTTCTACTAAAATACAAAAATTACAAAAATCTTGTTGACTACCTCTTCTTGCAAAGTTTGGAAATTGCTCTATCTTATGACTTGCCAATGCAGATACACACAGGCTTTGGGGATAGACTTTTGGATTTGAGGAAGACCAATCCTCTTCATCTCCGTTCAGTTCTTGAGGACAAGAGATATTCAAAGTGTCGGTTTGTTTTGTTACATGCATCTCATCCATACTCAAAGGAAGCATCATATCTAGCTTCTGTTTACTCCCAGGTTTACCTTGATTTTGGGTTGGCAATTCCAAAGCTTAGTGTACATGGGATGACTTCTGCAGTCAAAGATTTGCTAAATCTGGCTCCATTAGATAAGGTGATGTTCAGCACTGATGCCTATACATTTCCTGAAACCTTCTACCTAGGTGCAAAGAATTCTCGCGAAGTTGTTTTCTCTGTTCTGCATGATGCATGCATTGATGGTGAGCTCTCAATTCCTGAGGCTGTGGAAGCTGCAAAAGACATCCTTGCAAGAAATGCGATCCGCTTCTATAAGATTAGTTCACCCAACAATGCTGGCCCTCCTTAG

>Glyma.10g060100.2 sequence-type=CDS polypeptide=Glyma.10g060100.2.p locus=Glyma.10g060100 ID=Glyma.10g060100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATTTCAGCGAGCTGAGAAAAGCAGTGGAGGAGGTTGAACTGGTGGATGGTCACTCCCATAACATAGTTGCCCTAAACTCCACCTCCATCTCCGGTTTTGTTCAGGCCTTTACTGTGGGAGCCTTTGTTGATGCTGATGCCATTGCTTTTGCACAAACCTCTCTATCCTTCAAGAGAAGTTTGAGAGATGTTGCTGAGCTATACGGAACCGAGGTATCTTTGCAAGGTGTAGAGGAATACCGTAAAGCGTCTGGAATAGAATCCATCAGCTCAACATGCCTCAAAGCTGCAAAATTCTCCGCCATACTCATTGATGATGGCATAGAAATGGACAAAAAGCATGACATGCAATGGCACAAAAATTTTACACCTTTTGTTGGCAGAATCTTAAGAACTGAACGTGTGGCCGAGCAAATCCTTGAACAAGGTTTGCCTAATGGATCTTCATGGACAATCGATTCATTTACTGAAGCATATGTCTCAAAGGTTAAATCAGTTGCTAAAGAGATCCATGCTTTGAAAAGCATAGCTGCATACTACGGTGGCTTAGAAATCAATTTAAATGTGACTAAAACGGATGCTGAGGAGAGTCTGAAAGAGGTGTTAACAAATACTACGAAACCTATTTTTCTACTAAAATACAAAAATTACAAAAATCTTGTTGACTACCTCTTCTTGCAAAGTTTGGAAATTGCTCTATCTTATGACTTGCCAATGCAGATACACACAGGCTTTGGGGATAGACTTTTGGATTTGAGGAAGACCAATCCTCTTCATCTCCGTTCAGTTCTTGAGGACAAGAGATATTCAAAGTGTCGGTTTGTTTTGTTACATGCATCTCATCCATACTCAAAGGAAGCATCATATCTAGCTTCTGTTTACTCCCAGGTTTACCTTGATTTTGGGTTGGCAATTCCAAAGCTTAGTGTACATGGGATGACTTCTGCAGTCAAAGATTTGCTAAATCTGGCTCCATTAGATAAGGTGATGTTCAGCACTGATGCCTATACATTTCCTGAAACCTTCTACCTAGGTGCAAAGAATTCTCGCGAAGTTGTTTTCTCTGTTCTGCATGATGCATGCATTGATGGTGAGCTCTCAATTCCTGAGGCTGTGGAAGCTGCAAAAGACATCCTTGCAAGAAATGCGATCCGCTTCTATAAGATTAGTTCACCCAACAATGCTGGCCCTCCTTAG

>Glyma.10g060100.3 sequence-type=CDS polypeptide=Glyma.10g060100.3.p locus=Glyma.10g060100 ID=Glyma.10g060100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATATCTCATTGCCATTCACAGTCCTCTTGATTATCTCAATCCTCTGCAACCTTAAAGGACTCGAACATTCTTCACTGGTAGAGGGAGAGGGAATGGATTTCAGCGAGCTGAGAAAAGCAGTGGAGGAGGTTGAACTGGTGGATGGTCACTCCCATAACATAGTTGCCCTAAACTCCACCTCCATCTCCGGTTTTGTTCAGGCCTTTACTGTGGGAGCCTTTGTTGATGCTGATGCCATTGCTTTTGCACAAACCTCTCTATCCTTCAAGAGAAGTTTGAGAGATGTTGCTGAGCTATACGGAACCGAGGTATCTTTGCAAGGTGTAGAGGAATACCGTAAAGCGTCTGGAATAGAATCCATCAGCTCAACATGCCTCAAAGCTGCAAAATTCTCCGCCATACTCATTGATGATGGCATAGAAATGGACAAAAAGCATGACATGCAATGGCACAAAAATTTTACACCTTTTGTTGGCAGAATCTTAAGAACTGAACGTGTGGCCGAGCAAATCCTTGAACAAGGTTTGCCTAATGGATCTTCATGGACAATCGATTCATTTACTGAAGCATATGTCTCAAAGGTTAAATCAGTTGCTAAAGAGATCCATGCTTTGAAAAGCATAGCTGCATACTACGGTGGCTTAGAAATCAATTTAAATGTGACTAAAACGGATGCTGAGGAGAGTCTGAAAGAGGTGTTAACAAATACTACGAAACCTATTTTTCTACTAAAATACAAAAATTACAAAAATCTTGTTGACTACCTCTTCTTGCAAAGTTTGGAAATTGCTCTATCTTATGACTTGCCAATGCAGATACACACAGGCTTTGGGGATAGACTTTTGGATTTGAGGAAGACCAATCCTCTTCATCTCCGTTCAGTTCTTGAGGACAAGAGATATTCAAAGTGTCGGTTTGTTTTGTTACATGCATCTCATCCATACTCAAAGGAAGCATCATATCTAGCTTCTGTTTACTCCCAGGTTTACCTTGATTTTGGGTTGGCAATTCCAAAGCTTAGTGTACATGGGATGACTTCTGCAGTCAAAGATTTGCTAAATCTGGCTCCATTAGATAAGGTGATGTTCAGCACTGATGCCTATACATTTCCTGAAACCTTCTACCTAGGTGCAAAGAATTCTCGCGAAGTTGTTTTCTCTGTTCTGCATGATGCATGCATTGATGGTGAGCTCTCAATTCCTGAGGCTGTGGAAGCTGCAAAAGACATCCTTGCAAGAAATGCGATCCGCTTCTATAAGATTAGTTCACCCAACAATGCTGGCCCTCCTTAG

Predicted protein sequences of Glyma.10g060100

Limit To All Plant Sequences

>Glyma.10g060100.1.p sequence-type=predicted peptide transcript=Glyma.10g060100.1 locus=Glyma.10g060100 ID=Glyma.10g060100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDISLPFTVLLIISILCNLKGLEHSSLVEGEGMDFSELRKAVEEVELVDGHSHNIVALNSTSISGFVQAFTVGAFVDADAIAFAQTSLSFKRSLRDVAELYGTEVSLQGVEEYRKASGIESISSTCLKAAKFSAILIDDGIEMDKKHDMQWHKNFTPFVGRILRTERVAEQILEQGLPNGSSWTIDSFTEAYVSKVKSVAKEIHALKSIAAYYGGLEINLNVTKTDAEESLKEVLTNTTKPIFLLKYKNYKNLVDYLFLQSLEIALSYDLPMQIHTGFGDRLLDLRKTNPLHLRSVLEDKRYSKCRFVLLHASHPYSKEASYLASVYSQVYLDFGLAIPKLSVHGMTSAVKDLLNLAPLDKVMFSTDAYTFPETFYLGAKNSREVVFSVLHDACIDGELSIPEAVEAAKDILARNAIRFYKISSPNNAGPP*

>Glyma.10g060100.2.p sequence-type=predicted peptide transcript=Glyma.10g060100.2 locus=Glyma.10g060100 ID=Glyma.10g060100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDFSELRKAVEEVELVDGHSHNIVALNSTSISGFVQAFTVGAFVDADAIAFAQTSLSFKRSLRDVAELYGTEVSLQGVEEYRKASGIESISSTCLKAAKFSAILIDDGIEMDKKHDMQWHKNFTPFVGRILRTERVAEQILEQGLPNGSSWTIDSFTEAYVSKVKSVAKEIHALKSIAAYYGGLEINLNVTKTDAEESLKEVLTNTTKPIFLLKYKNYKNLVDYLFLQSLEIALSYDLPMQIHTGFGDRLLDLRKTNPLHLRSVLEDKRYSKCRFVLLHASHPYSKEASYLASVYSQVYLDFGLAIPKLSVHGMTSAVKDLLNLAPLDKVMFSTDAYTFPETFYLGAKNSREVVFSVLHDACIDGELSIPEAVEAAKDILARNAIRFYKISSPNNAGPP*

>Glyma.10g060100.3.p sequence-type=predicted peptide transcript=Glyma.10g060100.3 locus=Glyma.10g060100 ID=Glyma.10g060100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDISLPFTVLLIISILCNLKGLEHSSLVEGEGMDFSELRKAVEEVELVDGHSHNIVALNSTSISGFVQAFTVGAFVDADAIAFAQTSLSFKRSLRDVAELYGTEVSLQGVEEYRKASGIESISSTCLKAAKFSAILIDDGIEMDKKHDMQWHKNFTPFVGRILRTERVAEQILEQGLPNGSSWTIDSFTEAYVSKVKSVAKEIHALKSIAAYYGGLEINLNVTKTDAEESLKEVLTNTTKPIFLLKYKNYKNLVDYLFLQSLEIALSYDLPMQIHTGFGDRLLDLRKTNPLHLRSVLEDKRYSKCRFVLLHASHPYSKEASYLASVYSQVYLDFGLAIPKLSVHGMTSAVKDLLNLAPLDKVMFSTDAYTFPETFYLGAKNSREVVFSVLHDACIDGELSIPEAVEAAKDILARNAIRFYKISSPNNAGPP*

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