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Report for Sequence Feature Glyma.10g059400

Feature Type:gene_model
Chromosome:Gm10
Start:5490250
stop:5494015
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.10g059400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G08080.1AT alpha carbonic anhydrase 7 JGI N/AIEA
GO:0006730GO-bp one-carbon metabolic process EnsemblGenomesN/AIEA
GO:0004089GO-mf carbonate dehydratase activity EnsemblGenomesN/AIEA
GO:0008270GO-mf zinc ion binding EnsemblGenomesN/AIEA
GO:0046872GO-mf metal ion binding EnsemblGenomesN/AIEA
KOG0382 KOG Carbonic anhydrase JGI N/AIEA
PTHR18952Panther CARBONIC ANHYDRASE JGI N/AIEA
PTHR18952:SF2Panther JGI N/AIEA
PF00194PFAM Eukaryotic-type carbonic anhydrase JGI N/AIEA
GN7V-52386SoyCyc9-rxn carbonate dehydratase Plant Metabolic Network ISS

Expression Patterns of Glyma.10g059400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.10g059400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g06730 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g059400
>Glyma.10g059400.1 sequence-type=CDS polypeptide=Glyma.10g059400.1.p locus=Glyma.10g059400 ID=Glyma.10g059400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGTGCCTCAGTCATTGTTTCTCTTTCACATCTAACAAGCATGAAGCTTCAAAGAGTGAATACATATATAATTCCACATTTACTCGTGCTTTTCATGATCTTGTTAGCTTCAACATCAACAAGAGCACAAGTTGAAGAACTTGAGGACGAGAGAGAGTTCGATTATATTGGAGCAAGTGAAAAGGGGCCTCGTCACTGGGGAGAGATGAAAAAAGAATGGTCATCTTGTAAAAATGGACACTTGCAATCTCCCATAGACTTGTCATGTGCAAGAGTCAAAATTATCCCTCGATGTCGCCAACCTGATATATACTACACAGCTACTAATGCCACTATCATCAACAGAGGCCATGATATTGCTGTATATTGGAAGGATGATGCTGGTTCAGTATACCTCAATGGAACCGAATACTTTCTGAAACAATGTCATTGGCACTCTCCTTCGGAACATTCCATGAATGGCAGGAGATATGACTTGGAGATGCACATGGTGCATGTAAGTCCGGACAACAAGATTTTTGTGGTTGGAGCTCTCTATAAGTTTGGTCATCGTCCTGATCGTTTTCTCTCTCAGTTGGAGAAAGACATAAAGCACCTGGTTGATAATGAAGTAGAAAGAGAAATTGGAGAGACAAATCCCTCAGGATTACAGACAAGAGGCAATGCGTATTACAGATACGTAGGCTCACTCACCACTCCTCCTTGTACTGAAGGTGTCATCTGGAACATTGATAGAAAGATTAGGACAGTTTCGGAAGAACAAGTGAGGCTTTTGAGGGAGGCAGTGCATGACCATGCAGAGAGGAATGCAAGGCCAATGCAGCGACGTTACAATCGAGATATATTATACTTCCGATCCAAAAGCAGAGCAAAACCAGAATATTATTAA
Predicted protein sequences of Glyma.10g059400
>Glyma.10g059400.1.p sequence-type=predicted peptide transcript=Glyma.10g059400.1 locus=Glyma.10g059400 ID=Glyma.10g059400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSASVIVSLSHLTSMKLQRVNTYIIPHLLVLFMILLASTSTRAQVEELEDEREFDYIGASEKGPRHWGEMKKEWSSCKNGHLQSPIDLSCARVKIIPRCRQPDIYYTATNATIINRGHDIAVYWKDDAGSVYLNGTEYFLKQCHWHSPSEHSMNGRRYDLEMHMVHVSPDNKIFVVGALYKFGHRPDRFLSQLEKDIKHLVDNEVEREIGETNPSGLQTRGNAYYRYVGSLTTPPCTEGVIWNIDRKIRTVSEEQVRLLREAVHDHAERNARPMQRRYNRDILYFRSKSRAKPEYY*






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