SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.10g051400

Feature Type:gene_model
Chromosome:Gm10
Start:4569813
stop:4573754
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.10g051400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G09740.1AT ATSYP71,SYP71 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K08506KEGG Membrane trafficking JGI N/AIEA
KOG3202 KOG SNARE protein TLG1/Syntaxin 6 JGI N/AIEA
PTHR19957PantherFam SYNTAXIN JGI N/AIEA
PF05739Pfam SNARE domain JGI N/AIEA

Gene model name correspondences to Glyma.10g051400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g05870 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g051400
>Glyma.10g051400.1 sequence-type=CDS polypeptide=Glyma.10g051400.1.p locus=Glyma.10g051400 id=Glyma.10g051400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCGTCATCGACATTCTAACCCGAGTCGATTCCATTTGCAAGAAGTACGACAAATACGACGTCGATAAGCACCGCGATGCTAATGTCTCTGGCGACGATGCCTTTGCCAGACTCTACGCCTCCGTCGACGCCGACATCGAGGCCCTACTTCAGAAAGCAGAAAGTGCTTCCAAGGAGAAAGGTAAGGCATCAGCTGTAGCGATCAATGCAGAGATTCGTCGTACTAAGGCTCGGTTGCTGGAGGAGGTTCCCAAGTTGCAGAGATTAGCTGTGAAAAAGGTAAAGGGGCTTTCATCACAAGAATTTGCTGCCCGTAATGATTTGGTTCTTGCATTGCCGGATAGAATCCAAGCAATACCAGATGGGGCTCCTCCTGTGCCAAAACAAACTGGAGGCTGGGCAGCTTCTGCTTCACGTCCTGAAATTAAGTTTGATTCAGATGGGCGATTTGATGATGAATACTTCCAACAAAGTGAACAATCAAATCAATTTAGGCAGGAATATGAAATGCGTAGAATGAAACAGGATCAAGGTTTGGATGTGATTGCTGAAGGATTGGATACATTGAAAAACATGGCACATGATATGAATGAGGAACTGGATAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCCTCTGACCTTAAGAATACAAATGTTAGACTTAAAGACACAGTGAACCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATTTTGGGAATTGCTGCCTACTTATACAACGTACTAAAGAAATGA

>Glyma.10g051400.2 sequence-type=CDS polypeptide=Glyma.10g051400.2.p locus=Glyma.10g051400 id=Glyma.10g051400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCGTCATCGACATTCTAACCCGAGTCGATTCCATTTGCAAGAAGTACGACAAATACGACGTCGATAAGCACCGCGATGCTAATGTCTCTGGCGACGATGCCTTTGCCAGACTCTACGCCTCCGTCGACGCCGACATCGAGGCCCTACTTCAGAAAGCAGAAAGTGCTTCCAAGGAGAAAGGTAAGGCATCAGCTGTAGCGATCAATGCAGAGATTCGTCGTACTAAGGCTCGGTTGCTGGAGGAGGTTCCCAAGTTGCAGAGATTAGCTGTGAAAAAGGTAAAGGGGCTTTCATCACAAGAATTTGCTGCCCGTAATGATTTGGTTCTTGCATTGCCGGATAGAATCCAAGCAATACCAGATGGGGCTCCTCCTGTGCCAAAACAAACTGGAGGCTGGGCAGCTTCTGCTTCACGTCCTGAAATTAAGTTTGATTCAGATGGGCGATTTGATGATGAATACTTCCAACAAAGTGAACAATCAAATCAATTTAGGCAGGAATATGAAATGCGTAGAATGAAACAGGATCAAGGTTTGGATGTGATTGCTGAAGGATTGGATACATTGAAAAACATGGCACATGATATGAATGAGGAACTGGATAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCCTCTGACCTTAAGAATACAAATGTTAGACTTAAAGACACAGTGAACCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATTTTGGGAATTGCTGCCTACTTATACAACGTACTAAAGAAATGA
Predicted protein sequences of Glyma.10g051400
>Glyma.10g051400.1.p sequence-type=predicted peptide transcript=Glyma.10g051400.1 locus=Glyma.10g051400 id=Glyma.10g051400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSVIDILTRVDSICKKYDKYDVDKHRDANVSGDDAFARLYASVDADIEALLQKAESASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPDRIQAIPDGAPPVPKQTGGWAASASRPEIKFDSDGRFDDEYFQQSEQSNQFRQEYEMRRMKQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK*

>Glyma.10g051400.2.p sequence-type=predicted peptide transcript=Glyma.10g051400.2 locus=Glyma.10g051400 id=Glyma.10g051400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSVIDILTRVDSICKKYDKYDVDKHRDANVSGDDAFARLYASVDADIEALLQKAESASKEKGKASAVAINAEIRRTKARLLEEVPKLQRLAVKKVKGLSSQEFAARNDLVLALPDRIQAIPDGAPPVPKQTGGWAASASRPEIKFDSDGRFDDEYFQQSEQSNQFRQEYEMRRMKQDQGLDVIAEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo