Report for Sequence Feature Glyma.10g038000
| Feature Type: | gene_model |
| Chromosome: | Gm10 |
| Start: | 3365341 |
| stop: | 3372742 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.10g038000
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT4G21150.1 | AT |
HAP6 |
JGI | N/A | IEA |
| 2.4.99.18 | EC |
dolichyl-diphosphooligosaccharide-protein glycotransferase |
JGI | N/A | IEA |
| GO:0006487 | GO-bp |
protein N-linked glycosylation |
JGI | N/A | IEA |
| GO:0008250 | GO-cc |
oligosaccharyltransferase complex |
JGI | N/A | IEA |
| GO:0016021 | GO-cc |
integral component of membrane |
JGI | N/A | IEA |
| K12667 | KEGG |
Protein processing in endoplasmic reticulum |
JGI | N/A | IEA |
| KOG2447 |
KOG |
Oligosaccharyltransferase, delta subunit (ribophorin II) |
JGI | N/A | IEA |
| PTHR12640 | PantherFam |
RIBOPHORIN II |
JGI | N/A | IEA |
| PTHR12640:SF0 | PantherFam |
DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 |
JGI | N/A | IEA |
| PF05817 | Pfam |
Oligosaccharyltransferase subunit Ribophorin II |
JGI | N/A | IEA |
Gene model name correspondences to Glyma.10g038000 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma10g04380 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.10g038000
>Glyma.10g038000.1 sequence-type=CDS polypeptide=Glyma.10g038000.1.p locus=Glyma.10g038000 id=Glyma.10g038000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACGCACGTGAGTCACGTGATAGTAGCGGCAGCATTTCTTCTACTTCTTCTCCCTTTCTCTTTCTCCTTCTCCATCTCCCATTCTCACCGATCCGCTGCAATCAACCTCTTCGCTGCCACTCCCACAAGCTTAGAAGACGCGTACGAGGCGCTTAGAGTTTTTCAGATTCTCGGAATCGAAGAGAAGAATACTCCTGTGAACGAGGACACGTGTCAGAAAGTAGTTGAAAGTCTAGCCTCGTCTTCTCCTCTCAAGGATTTGTTCTATGCCTTGAAAGTTAACGCCATTTTAAAATGCAATGTCAATGGGAACGTTTTTAAGGATATTGCTTCAAGACTTAAAGCCACTGTTCATGATGCGAGTGCTTTGCTTGACATCTACTATTCAATTGGAGGTTTGGTTGTTATAAAGGATCAGGATTCTAATGTTGATGTGCTTCTTGCTGATGTTGATGGGGTTTTCCAATCAATCAAGGTTCTCAGTCAAAGTGACGGAAGATGGCGCTATAGTTCTGATAATCCAGAGTCTAGTACCTATGCTGCTGGATTAGCTCTTGAATCCCTTGCTGGATTGATCTCACTAGCTTCTTCTGAATTTGATCAATCTAAGGTCAACGTAGTGAAAAATGGCATAGTAAAGCTTTTTGATGGCATTGAGAAATATGAGGATGGAACCTTTTATTTTGATGAGAAATATGTTGGTGGACATGAGCAACGGGGTTCTCTTTCCACAACTTCTTCAGTTGTTAGAGGGGTTACTGCATTTGCTGCTGTAACTTCTGGAAAAATAAATCTTCCAGGGGATAAAATATTGGGTCTGGCAAAATTTTTCTTGGGCATTGGAATCCCTGGAGATGCCAAGGACTTCTTCAATCAAGTTGAGTCATTAGCTTTTCTAGAGAGCAACAGGATTTCCATTCCATTGATATTGTCACTCCCAGAAACAGCTTATTCATTGACCAAGAAAGGCCAGCTTAAGGTCAAGGTGAATACAGTGCTTGGTTCAGCTGCACCACCGTTAACAGTGAAGCTTGTCCGTGCTTTTAGCACAGGTGCAAAAGATTCAGCTATTATTGACAGCAAGGAGCTCCGGTATGACCAAGAAAGTGGATTTCATGTCTTGGATGCTTTGCCGAAGAATGTGGATGTGGGGACATATGTGTTTGTTTTTGAGATTGTGCTTCATGATTTTGGCAGTGAAAAAGTTTATGCAACTGGAGGCCAAATTCATGTACCAATATATGTCACTGGAATTATTGAAGTTGGTAATGCAGAAATCACAGTTCTTGACAGTGATCTTGGAAGTGCTGAAACCCAGAAAAAGCTAGATTTGGCTGGAAATGATGCCGTTTCACTCTCAGCTAACCACCTGCAGAAGTTGAGGTTTTCTTTCCAATTGACAACTCCTCATGGTCATGTTTTTAAGCCTCATCAGGCGTTTTTCAAGTTGAGACATGAGACAAAGGTTGAACACATCTTTGTGGTTGGAAATACCGGCAAGAAGTTTGAGAAAGTTCTCGATTTTCTTGGCTTGGTGGAGAAACTTTTCTATCTCTCGGGAAAATATGAAATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTACGGCTACTTGGCCATGTTGAATTAGATCTTCCAGAAGCACCTGAGAAAGCACCCCGTCCTCCACCACCACCTGTTGATCCTTACTCAAGATATGGGCCCAAAGCAGAGATTACCCATATATTCAGGTCTCCTGAAAAGAGACCTCACCAGGAACTCTCTCTTGCTTTCTTGGGTTTGATCCTTTTGCCATTCATTGGCTTTTTGGTTGGGTTATTGCGCTTGGGGGTGAACCTAAAGAATTTCCCTGGTTCAACAGTACCTGCCACATTTGGGATCCTTTTCCATGTTGGTATTGCGGCGGTTTTGTTACTTTATGTACTTTTCTGGTTGAAGCTGGACCTGTTCACTACACTCAAAGCATTTGGTCTTTTGGGAGCTATACTGATGTTTGTGGGGCACAGAATTCTTTCTCATCTCGCTTTTACATCTGCCAAGTTGAAATCTGCATGA
Predicted protein sequences of Glyma.10g038000
>Glyma.10g038000.1.p sequence-type=predicted peptide transcript=Glyma.10g038000.1 locus=Glyma.10g038000 id=Glyma.10g038000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATHVSHVIVAAAFLLLLLPFSFSFSISHSHRSAAINLFAATPTSLEDAYEALRVFQILGIEEKNTPVNEDTCQKVVESLASSSPLKDLFYALKVNAILKCNVNGNVFKDIASRLKATVHDASALLDIYYSIGGLVVIKDQDSNVDVLLADVDGVFQSIKVLSQSDGRWRYSSDNPESSTYAAGLALESLAGLISLASSEFDQSKVNVVKNGIVKLFDGIEKYEDGTFYFDEKYVGGHEQRGSLSTTSSVVRGVTAFAAVTSGKINLPGDKILGLAKFFLGIGIPGDAKDFFNQVESLAFLESNRISIPLILSLPETAYSLTKKGQLKVKVNTVLGSAAPPLTVKLVRAFSTGAKDSAIIDSKELRYDQESGFHVLDALPKNVDVGTYVFVFEIVLHDFGSEKVYATGGQIHVPIYVTGIIEVGNAEITVLDSDLGSAETQKKLDLAGNDAVSLSANHLQKLRFSFQLTTPHGHVFKPHQAFFKLRHETKVEHIFVVGNTGKKFEKVLDFLGLVEKLFYLSGKYEIELTVGDAVMENSFLRLLGHVELDLPEAPEKAPRPPPPPVDPYSRYGPKAEITHIFRSPEKRPHQELSLAFLGLILLPFIGFLVGLLRLGVNLKNFPGSTVPATFGILFHVGIAAVLLLYVLFWLKLDLFTTLKAFGLLGAILMFVGHRILSHLAFTSAKLKSA*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
