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Report for Sequence Feature Glyma.10g032100

Feature Type:gene_model
Chromosome:Gm10
Start:2807234
stop:2812723
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.10g032100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G54660.1AT glutathione reductase JGI N/AIEA
GO:0000305GO-bp response to oxygen radical EnsemblGenomesN/AIEA
GO:0006749GO-bp glutathione metabolic process EnsemblGenomesN/AIEA
GO:0022900GO-bp electron transport chain EnsemblGenomesN/AIEA
GO:0045454GO-bp cell redox homeostasis EnsemblGenomesN/AIEA
GO:0045454GO-bp cell redox homeostasis JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0098869GO-bp cellular oxidant detoxification EnsemblGenomesN/AIEA
GO:0005623GO-cc cell EnsemblGenomesN/AIEA
GO:0005739GO-cc mitochondrion EnsemblGenomesN/AIEA
GO:0009570GO-cc chloroplast stroma EnsemblGenomesN/AIEA
GO:0004362GO-mf glutathione-disulfide reductase activity EnsemblGenomesN/AIEA
GO:0009055GO-mf electron transfer activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
GO:0016668GO-mf oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor EnsemblGenomesN/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding EnsemblGenomesN/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding JGI N/AIEA
GO:0050661GO-mf NADP binding EnsemblGenomesN/AIEA
KOG0405 KOG Pyridine nucleotide-disulphide oxidoreductase JGI N/AIEA
PTHR22912Panther DISULFIDE OXIDOREDUCTASE JGI N/AIEA
PTHR22912:SF27Panther JGI N/AIEA
PF00070PFAM Pyridine nucleotide-disulphide oxidoreductase JGI N/AIEA
PF02852PFAM Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JGI N/AIEA
PF07992PFAM Pyridine nucleotide-disulphide oxidoreductase JGI N/AIEA
GLUT-REDOX-PWYSoyCyc9 glutathione-glutaredoxin redox reactions Plant Metabolic Network ISS
PWY-4081SoyCyc9 glutathione-peroxide redox reactions Plant Metabolic Network ISS
GN7V-49552SoyCyc9-rxn glutathione-disulfide reductase Plant Metabolic Network ISS

Proteins Associated with Glyma.10g032100
LocusGene SymbolProtein Name
GR-2a Chloroplastic glutathione reductase 2 gene a

Expression Patterns of Glyma.10g032100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.10g032100
ParalogEvidenceComments
Glyma.02g141800 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.10g032100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g03740 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.10g032100
>Glyma.10g032100.2 sequence-type=transcript locus=Glyma.10g032100 ID=Glyma.10g032100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAAATTTGCATATTGGCAAGCAAAGCGGGGGTAAACAAAAACAATGGCGACAtcgctctccgtttcgccatctctctctctcaacactctcttcttcgccaaagcgcttcctctatctcgtccctcccttctctctctccctctccccaaatccctcctctctctctcCACGCGCCGCCGCACCTTCGCCGTCCGCGCCGAATCCCAAAACGGCGCCGATGCCGTCCCCGCACACTACGACTTCGACCTCTTCACCATCGGCGCCGGCAGCGGCGGCGTCCGAGCCGCTCGCTTCGCTGCCAACTACGGCGCTTCCGTCGCCATCTGCGAGCTTCCTTTCTCCACTATCTCCTCCGAAACCACCGGAGGCGTCGGCGGAACCTGTGTAATACGAGGATGTGTGCCAAAGAAGTTGCTGGTTTATGCTTCTAAATTTTCTCATGAATTTGAAGAAAGTAATGGTTTTGGATGGAGATATGACAGTGAGCCCAAGCATGATTGGAGTAGTTTGATAGCTAATAAAAATGCTGAGTTGCAGCGTCTTACTGGCATCTACAAGAATATTTTGAACAATGCTGGGGTCAAGCTGATTGAAGGCCATGGGAAGATTATAGATCCTCACACAGTTGATGTTAATGGAAAGCTATATTCAGCCAAACACATTTTAGTTACCGTTGGAGGTCGCCCCTTCATTCCTGATATTCCTGGGAATGAATATGCAATAGATTCAGATGCTGCCCTTGATTTACCAACAAAACCTGAGAAAATAGCCATTGTGGGTGGTGGTTACATTGCCTTGGAGTTTGCTGGTATCTTTAATGGTTTGAAAAGCGAGGTTCATGTATTTATACGGCAAAAGAAGGTTTTGCGGGGATTTGATGAAGAGATTAGAGATTTTGTTTCAGAACAAATGTCTGTAAGAGGTATTGAATTCCATACCGAGGAGTCTCCCCAAGCTATCACAAAGTCAGCTGATGGCTCATTCTCTTTAAAGACCAACAAAGGTACAGTGGATGGTTTCTCTCATATTATGTTTGCTACAGGACGCAGACCTAATACTCAGAACTTAGGCCTGGAGTCTGTTGGTGTGAAAATAGCTAAAGATGGAGCTATAGAGGTTGATGAATACTCTCAAACATCAGTTCCTTCAATTTGGGCAGTTGGAGATGTTACAAACAGGATAAATCTCACCCCAGTTGCTTTGATGGAGGGAGGGGCATTAGTAAAAACACTGTTTCAGGATAACCCAACAAAACCTGATTATAGAGCTGTTCCTTCTGCTGTATTTTCTCAACCACCAATTGGACAAGTTGGTCTTACTGAGGAACAGGCTGTACAACAATATGGAGATATTGACATCTTCACTGCAAATTTTAGGCCACTGAAAGCTACTCTCTCTGGGCTTCCAGACCGTGTTTTTATGAAATTAGTAGTCTGTGCAAAAACAAACGAAGTTCTAGGTTTGCATATGTGTGGAGACGATGCTCCTGAAATTGTGCAGGGGTTTGCAGTTGCTCTTAAAGCTCGCTTGACCAAGGCTGACTTTGATGCCACTGTAGGCATTCACCCAAGTGCCGCTGAGGAATTTGTTACCATGAGGACACCTACTAGGAAGATTCGAAAGAGTGAATCGTCTGAGGGAAAGTCGGGTTCTGAAGCAAAAACTGCAGCAGGGGTTTAAACAGCATTACACTGCTTCAATTGTTATACTTGAAGAAACCAGCTGGTGCCTCAAGTTACCTGGCGGGTTGTCACTGAATTTAGCGTGGTTGTCAAATTGTTGGGAAGACATTCAGAACAATCTTCCGCAACTGAGTTTTCAGAGCAATACATGGAATATCTCATTGAGGTCGTGTGTCATACTCTCAAGTCTGCAGTGTAATTATCAGAGTTGGGGAGCCTGGTAAGGGCGAGTGGAATTTTTGGTGCCATTGTTTGCCATTTGTAATTTAACTTGCCAGTCCTTTCATGTACAGAAATAAAAGGAAATTCCGTGTGGGACTTTGATTTTAAATAATCTCTATCGAATTTGAACTAGTTGGAATTGAGACAAACAGCAATGGTCAGCATGAAAAATATTTTTCTTTTCTAATATATATAACGTTGTTCATCTC
Coding sequences of Glyma.10g032100
>Glyma.10g032100.1 sequence-type=CDS polypeptide=Glyma.10g032100.1.p locus=Glyma.10g032100 ID=Glyma.10g032100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGACATCGCTCTCCGTTTCGCCATCTCTCTCTCTCAACACTCTCTTCTTCGCCAAAGCGCTTCCTCTATCTCGTCCCTCCCTTCTCTCTCTCCCTCTCCCCAAATCCCTCCTCTCTCTCTCCACGCGCCGCCGCACCTTCGCCGTCCGCGCCGAATCCCAAAACGGCGCCGATGCCGTCCCCGCACACTACGACTTCGACCTCTTCACCATCGGCGCCGGCAGCGGCGGCGTCCGAGCCGCTCGCTTCGCTGCCAACTACGGCGCTTCCGTCGCCATCTGCGAGCTTCCTTTCTCCACTATCTCCTCCGAAACCACCGGAGGCGTCGGCGGAACCTGTGTAATACGAGGATGTGTGCCAAAGAAGTTGCTGGTTTATGCTTCTAAATTTTCTCATGAATTTGAAGAAAGTAATGGTTTTGGATGGAGATATGACAGTGAGCCCAAGCATGATTGGAGTAGTTTGATAGCTAATAAAAATGCTGAGTTGCAGCGTCTTACTGGCATCTACAAGAATATTTTGAACAATGCTGGGGTCAAGCTGATTGAAGGCCATGGGAAGATTATAGATCCTCACACAGTTGATGTTAATGGAAAGCTATATTCAGCCAAACACATTTTAGTTACCGTTGGAGGTCGCCCCTTCATTCCTGATATTCCTGGGAATGAATATGCAATAGATTCAGATGCTGCCCTTGATTTACCAACAAAACCTGAGAAAATAGCCATTGTGGGTGGTGGTTACATTGCCTTGGAGTTTGCTGGTATCTTTAATGGTTTGAAAAGCGAGGTTCATGTATTTATACGGCAAAAGAAGGTTTTGCGGGGATTTGATGAAGAGATTAGAGATTTTGTTTCAGAACAAATGTCTGTAAGAGGTATTGAATTCCATACCGAGGAGTCTCCCCAAGCTATCACAAAGTCAGCTGATGGCTCATTCTCTTTAAAGACCAACAAAGGTACAGTGGATGGTTTCTCTCATATTATGTTTGCTACAGGACGCAGACCTAATACTCAGAACTTAGGCCTGGAGTCTGTTGGTGTGAAAATAGCTAAAGATGGAGCTATAGAGGTTGATGAATACTCTCAAACATCAGTTCCTTCAATTTGGGCAGTTGGAGATGTTACAAACAGGATAAATCTCACCCCAGTTGCTTTGATGGAGGGAGGGGCATTAGTAAAAACACTGTTTCAGGATAACCCAACAAAACCTGATTATAGAGCTGTTCCTTCTGCTGTATTTTCTCAACCACCAATTGGACAAGTTGGTCTTACTGAGGAACAGGCTGTACAACAATATGGAGATATTGACATCTTCACTGCAAATTTTAGGCCACTGAAAGCTACTCTCTCTGGGCTTCCAGACCGTGTTTTTATGAAATTAGTAGTCTGTGCAAAAACAAACGAAGTTCTAGGTTTGCATATGTGTGGAGACGATGCTCCTGAAATTGTGCAGGGGTTTGCAGTTGCTCTTAAAGCTCGCTTGACCAAGGCTGACTTTGATGCCACTGTAGGCATTCACCCAAGTGCCGCTGAGGAATTTGTTACCATGAGGACACCTACTAGGAAGATTCGAAAGAGTGAATCGTCTGAGGGAAAGTCGGGTTCTGAAGCAAAAACTGCAGCAGGGGTTTAA

>Glyma.10g032100.2 sequence-type=CDS polypeptide=Glyma.10g032100.2.p locus=Glyma.10g032100 ID=Glyma.10g032100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGACATCGCTCTCCGTTTCGCCATCTCTCTCTCTCAACACTCTCTTCTTCGCCAAAGCGCTTCCTCTATCTCGTCCCTCCCTTCTCTCTCTCCCTCTCCCCAAATCCCTCCTCTCTCTCTCCACGCGCCGCCGCACCTTCGCCGTCCGCGCCGAATCCCAAAACGGCGCCGATGCCGTCCCCGCACACTACGACTTCGACCTCTTCACCATCGGCGCCGGCAGCGGCGGCGTCCGAGCCGCTCGCTTCGCTGCCAACTACGGCGCTTCCGTCGCCATCTGCGAGCTTCCTTTCTCCACTATCTCCTCCGAAACCACCGGAGGCGTCGGCGGAACCTGTGTAATACGAGGATGTGTGCCAAAGAAGTTGCTGGTTTATGCTTCTAAATTTTCTCATGAATTTGAAGAAAGTAATGGTTTTGGATGGAGATATGACAGTGAGCCCAAGCATGATTGGAGTAGTTTGATAGCTAATAAAAATGCTGAGTTGCAGCGTCTTACTGGCATCTACAAGAATATTTTGAACAATGCTGGGGTCAAGCTGATTGAAGGCCATGGGAAGATTATAGATCCTCACACAGTTGATGTTAATGGAAAGCTATATTCAGCCAAACACATTTTAGTTACCGTTGGAGGTCGCCCCTTCATTCCTGATATTCCTGGGAATGAATATGCAATAGATTCAGATGCTGCCCTTGATTTACCAACAAAACCTGAGAAAATAGCCATTGTGGGTGGTGGTTACATTGCCTTGGAGTTTGCTGGTATCTTTAATGGTTTGAAAAGCGAGGTTCATGTATTTATACGGCAAAAGAAGGTTTTGCGGGGATTTGATGAAGAGATTAGAGATTTTGTTTCAGAACAAATGTCTGTAAGAGGTATTGAATTCCATACCGAGGAGTCTCCCCAAGCTATCACAAAGTCAGCTGATGGCTCATTCTCTTTAAAGACCAACAAAGGTACAGTGGATGGTTTCTCTCATATTATGTTTGCTACAGGACGCAGACCTAATACTCAGAACTTAGGCCTGGAGTCTGTTGGTGTGAAAATAGCTAAAGATGGAGCTATAGAGGTTGATGAATACTCTCAAACATCAGTTCCTTCAATTTGGGCAGTTGGAGATGTTACAAACAGGATAAATCTCACCCCAGTTGCTTTGATGGAGGGAGGGGCATTAGTAAAAACACTGTTTCAGGATAACCCAACAAAACCTGATTATAGAGCTGTTCCTTCTGCTGTATTTTCTCAACCACCAATTGGACAAGTTGGTCTTACTGAGGAACAGGCTGTACAACAATATGGAGATATTGACATCTTCACTGCAAATTTTAGGCCACTGAAAGCTACTCTCTCTGGGCTTCCAGACCGTGTTTTTATGAAATTAGTAGTCTGTGCAAAAACAAACGAAGTTCTAGGTTTGCATATGTGTGGAGACGATGCTCCTGAAATTGTGCAGGGGTTTGCAGTTGCTCTTAAAGCTCGCTTGACCAAGGCTGACTTTGATGCCACTGTAGGCATTCACCCAAGTGCCGCTGAGGAATTTGTTACCATGAGGACACCTACTAGGAAGATTCGAAAGAGTGAATCGTCTGAGGGAAAGTCGGGTTCTGAAGCAAAAACTGCAGCAGGGGTTTAA
Predicted protein sequences of Glyma.10g032100
>Glyma.10g032100.1.p sequence-type=predicted peptide transcript=Glyma.10g032100.1 locus=Glyma.10g032100 ID=Glyma.10g032100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATSLSVSPSLSLNTLFFAKALPLSRPSLLSLPLPKSLLSLSTRRRTFAVRAESQNGADAVPAHYDFDLFTIGAGSGGVRAARFAANYGASVAICELPFSTISSETTGGVGGTCVIRGCVPKKLLVYASKFSHEFEESNGFGWRYDSEPKHDWSSLIANKNAELQRLTGIYKNILNNAGVKLIEGHGKIIDPHTVDVNGKLYSAKHILVTVGGRPFIPDIPGNEYAIDSDAALDLPTKPEKIAIVGGGYIALEFAGIFNGLKSEVHVFIRQKKVLRGFDEEIRDFVSEQMSVRGIEFHTEESPQAITKSADGSFSLKTNKGTVDGFSHIMFATGRRPNTQNLGLESVGVKIAKDGAIEVDEYSQTSVPSIWAVGDVTNRINLTPVALMEGGALVKTLFQDNPTKPDYRAVPSAVFSQPPIGQVGLTEEQAVQQYGDIDIFTANFRPLKATLSGLPDRVFMKLVVCAKTNEVLGLHMCGDDAPEIVQGFAVALKARLTKADFDATVGIHPSAAEEFVTMRTPTRKIRKSESSEGKSGSEAKTAAGV*

>Glyma.10g032100.2.p sequence-type=predicted peptide transcript=Glyma.10g032100.2 locus=Glyma.10g032100 ID=Glyma.10g032100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATSLSVSPSLSLNTLFFAKALPLSRPSLLSLPLPKSLLSLSTRRRTFAVRAESQNGADAVPAHYDFDLFTIGAGSGGVRAARFAANYGASVAICELPFSTISSETTGGVGGTCVIRGCVPKKLLVYASKFSHEFEESNGFGWRYDSEPKHDWSSLIANKNAELQRLTGIYKNILNNAGVKLIEGHGKIIDPHTVDVNGKLYSAKHILVTVGGRPFIPDIPGNEYAIDSDAALDLPTKPEKIAIVGGGYIALEFAGIFNGLKSEVHVFIRQKKVLRGFDEEIRDFVSEQMSVRGIEFHTEESPQAITKSADGSFSLKTNKGTVDGFSHIMFATGRRPNTQNLGLESVGVKIAKDGAIEVDEYSQTSVPSIWAVGDVTNRINLTPVALMEGGALVKTLFQDNPTKPDYRAVPSAVFSQPPIGQVGLTEEQAVQQYGDIDIFTANFRPLKATLSGLPDRVFMKLVVCAKTNEVLGLHMCGDDAPEIVQGFAVALKARLTKADFDATVGIHPSAAEEFVTMRTPTRKIRKSESSEGKSGSEAKTAAGV*






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