Glyma.10g031700

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Report for Sequence Feature Glyma.10g031700

Feature Type:	gene_model
Chromosome:	Gm10
Start:	2761444
stop:	2764065
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.10g031700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G20010.1	AT	plastid transcriptionally active 9	JGI	N/A	IEA
GO:0006260	GO-bp	DNA replication	EnsemblGenomes	N/A	IEA
GO:0003677	GO-mf	DNA binding	EnsemblGenomes	N/A	IEA
GO:0003697	GO-mf	single-stranded DNA binding	EnsemblGenomes	N/A	IEA
GO:0003697	GO-mf	single-stranded DNA binding	JGI	N/A	IEA
PF00436	PFAM	Single-strand binding protein family	JGI	N/A	IEA

Expression Patterns of Glyma.10g031700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.10g031700 not represented in the dataset	Glyma.10g031700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.10g031700

Paralog	Evidence	Comments
Glyma.02g142700	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.10g031700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma10g03700	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.10g031700

Limit To All Plant Sequences

>Glyma.10g031700.2 sequence-type=transcript locus=Glyma.10g031700 ID=Glyma.10g031700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGGAATGGGGGCTAGTTTATTACAGTCTACAAAACTGGGCTCCAACCAATGGGCCGAAACCCAACCGTTCTGTCCGAAACCGATTACAAATTTTCCAGTTCCCTTATCTATCCGCGCTGTGGAAAGAACGAAGACACGGGAAAGAAAAATGGTGCTAGAACAAGCAGTATCATCATCAAGCACCTTGAGGAACGTTTTCACCAATCCCAAAACCCTAATTTCAAAACCCCAATTCCAAGTCGCCGCTTCCCCTTCATGGAAACCACAGCAGCCGCGCTGGGAAGGGTGGCTGGGGATAAACTTGAAGTGCTCCATGACAACAACAACAACGCCATCATCATACCCTAAGCCCTCGGAGATTCCGTGGCAGAAGGAACTCTGCAACTCCGTCAACCTCATCGGCAACGTCGCCGCCCCCGTCGAAATCAAATACCTCCCCTCCGGCAAGGTCGTCGCCTGGACCCGCCTCTACGTCAAGAAAAGCGCCACACAATCATCGCCCATAAACCTCACTTTCTGGGACGACCTCGCGCATGTCGCTTCCCAGCATCTCCAGAAAGGTCACCAGATTCATGTCTCTGGTCGCCTCATTACCGACACTGTTGAAACGGAGGAAGGAAAAAGCCAAACTTACTACAAGGTTTTCGTAACCGCGGCCAATTGGTTATGATATAGGGTTTAAGGTTTAGGCTTTAATTAATTGAGTTTGATGCCTATCCACTAACTCTAAAACAAACTTACATCATACGTGTTTTGATTGGATCACTTTGCAAAACTTTTTACACTGTTAGTGCATAATTCTTCTTCTCTAATTAGAAATAGATGTACATTGTGGCCGCTGAAAAAACAGTTATGACTTGTTTTGTTATTTGAATGTTGCCAGGTTGTTGTTCAACAGCTGAATTTCATTGAGAGGAATTTCTCTTCGGTGTCATCATCGCAGGGTCAAGAGTTTGATTTTGCGATGGCTGGTAGTGGTAGGAAAGTGAGCAATGCTGCAAACAGTACTGGTTCTGTGGTGGAAACATGGAATGCGTTCTTTGCTAACCCAGGGGAGTGGTGGGACAATAGGAACAACAAGAGGAATCCAAAAGCTCCTGATTTCAAACACAAAGATACAGGGGAAGCTCTGTGGATCGAAGGCAGATACAATCCGCCATGGGTCAAGTCTCAACTGGAAATACTAGACTCAAGAATGGGGTCGTTTGCTAGTCAAAATGCTAGGATGCCTGTAGGTATGGTAGCTGCAGATGAAATTGTGTCTTTCTAATGGCTCATGCCAAATCTCGCCCATGTAATATTCAATTTTAACTGTGAAACTTCTTTGTACAGTTTGCATTTTGCCCCTAATTTTAAATTGTATGTATGTCAGTACTGATAATGGTTAAGTTTGCCCTTGAGCTATATTTAGTTAGTGATCAAGTGATTGTGTTGCATTC

>Glyma.10g031700.3 sequence-type=transcript locus=Glyma.10g031700 ID=Glyma.10g031700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGGAATGGGGGCTAGTTTATTACAGTCTACAAAACTGGGCTCCAACCAATGGGCCGAAACCCAACCGTTCTGTCCGAAACCGATTACAAATTTTCCAGTTCCCTTATCTATCCGCGCTGTGGAAAGAACGAAGACACGGGAAAGAAAAATGGTGCTAGAACAAGCAGTATCATCATCAAGCACCTTGAGGAACGTTTTCACCAATCCCAAAACCCTAATTTCAAAACCCCAATTCCAAGTCGCCGCTTCCCCTTCATGGAAACCACAGCAGCCGCGCTGGGAAGGGTGGCTGGGGATAAACTTGAAGTGCTCCATGACAACAACAACAACGCCATCATCATACCCTAAGCCCTCGGAGATTCCGTGGCAGAAGGAACTCTGCAACTCCGTCAACCTCATCGGCAACGTCGCCGCCCCCGTCGAAATCAAATACCTCCCCTCCGGCAAGGTCGTCGCCTGGACCCGCCTCTACGTCAAGAAAAGCGCCACACAATCATCGCCCATAAACCTCACTTTCTGGGACGACCTCGCGCATGTCGCTTCCCAGCATCTCCAGAAAGGTCACCAGATTCATGTCTCTGGTCGCCTCATTACCGACACTGTTGAAACGGAGGAAGGAAAAAGCCAAACTTACTACAAGGTTGTTGTTCAACAGCTGAATTTCATTGAGAGGAATTTCTCTTCGGTGTCATCATCGCAGGGTCAAGAGTTTGATTTTGCGATGGCTGGTAGTGGTAGGAAAGTGAGCAATGCTGCAAACAGTACTGGTTCTGTGGTGGAAACATGGAATGCGTTCTTTGCTAACCCAGGGGAGTGGTGGGACAATAGGAACAACAAGCCATGTCTTGCTCAGTTCATAATTGACTGATGAATGTGATTTTCCCCTCAAGTTGTATCCTCCATGTTCTTTTAAAGCCCTTGTGAATTTTCCATTCCTTTTATCTTCAAATATGTTTGGAAAATTTGCAGAGGAATCCAAAAGCTCCTGATTTCAAACACAAAGATACAGGGGAAGCTCTGTGGATCGAAGGCAGATACAATCCGCCATGGGTCAAGTCTCAACTGGAAATACTAGACTCAAGAATGGGGTCGTTTGCTAGTCAAAATGCTAGGATGCCTGTAGGTATGGTAGCTGCAGATGAAATTGTGTCTTTCTAATGGCTCATGCCAAATCTCGCCCATGTAATATTCAATTTTAACTGTGAAACTTCTTTGTACAGTTTGCATTTTGCCCCTAATTTTAAATTGTATGTATGTCAGTACTGATAATGGTTAAGTTTGCCCTTGAGCTATATTTAGTTAGTGATCAAGTGATTGTGTTGCATTC

Coding sequences of Glyma.10g031700

Limit To All Plant Sequences

>Glyma.10g031700.1 sequence-type=CDS polypeptide=Glyma.10g031700.1.p locus=Glyma.10g031700 ID=Glyma.10g031700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGGCTAGTTTATTACAGTCTACAAAACTGGGCTCCAACCAATGGGCCGAAACCCAACCGTTCTGTCCGAAACCGATTACAAATTTTCCAGTTCCCTTATCTATCCGCGCTGTGGAAAGAACGAAGACACGGGAAAGAAAAATGGTGCTAGAACAAGCAGTATCATCATCAAGCACCTTGAGGAACGTTTTCACCAATCCCAAAACCCTAATTTCAAAACCCCAATTCCAAGTCGCCGCTTCCCCTTCATGGAAACCACAGCAGCCGCGCTGGGAAGGGTGGCTGGGGATAAACTTGAAGTGCTCCATGACAACAACAACAACGCCATCATCATACCCTAAGCCCTCGGAGATTCCGTGGCAGAAGGAACTCTGCAACTCCGTCAACCTCATCGGCAACGTCGCCGCCCCCGTCGAAATCAAATACCTCCCCTCCGGCAAGGTCGTCGCCTGGACCCGCCTCTACGTCAAGAAAAGCGCCACACAATCATCGCCCATAAACCTCACTTTCTGGGACGACCTCGCGCATGTCGCTTCCCAGCATCTCCAGAAAGGTCACCAGATTCATGTCTCTGGTCGCCTCATTACCGACACTGTTGAAACGGAGGAAGGAAAAAGCCAAACTTACTACAAGGTTGTTGTTCAACAGCTGAATTTCATTGAGAGGAATTTCTCTTCGGTGTCATCATCGCAGGGTCAAGAGTTTGATTTTGCGATGGCTGGTAGTGGTAGGAAAGTGAGCAATGCTGCAAACAGTACTGGTTCTGTGGTGGAAACATGGAATGCGTTCTTTGCTAACCCAGGGGAGTGGTGGGACAATAGGAACAACAAGAGGAATCCAAAAGCTCCTGATTTCAAACACAAAGATACAGGGGAAGCTCTGTGGATCGAAGGCAGATACAATCCGCCATGGGTCAAGTCTCAACTGGAAATACTAGACTCAAGAATGGGGTCGTTTGCTAGTCAAAATGCTAGGATGCCTGTAGGTATGGTAGCTGCAGATGAAATTGTGTCTTTCTAA

>Glyma.10g031700.2 sequence-type=CDS polypeptide=Glyma.10g031700.2.p locus=Glyma.10g031700 ID=Glyma.10g031700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGGCTAGTTTATTACAGTCTACAAAACTGGGCTCCAACCAATGGGCCGAAACCCAACCGTTCTGTCCGAAACCGATTACAAATTTTCCAGTTCCCTTATCTATCCGCGCTGTGGAAAGAACGAAGACACGGGAAAGAAAAATGGTGCTAGAACAAGCAGTATCATCATCAAGCACCTTGAGGAACGTTTTCACCAATCCCAAAACCCTAATTTCAAAACCCCAATTCCAAGTCGCCGCTTCCCCTTCATGGAAACCACAGCAGCCGCGCTGGGAAGGGTGGCTGGGGATAAACTTGAAGTGCTCCATGACAACAACAACAACGCCATCATCATACCCTAAGCCCTCGGAGATTCCGTGGCAGAAGGAACTCTGCAACTCCGTCAACCTCATCGGCAACGTCGCCGCCCCCGTCGAAATCAAATACCTCCCCTCCGGCAAGGTCGTCGCCTGGACCCGCCTCTACGTCAAGAAAAGCGCCACACAATCATCGCCCATAAACCTCACTTTCTGGGACGACCTCGCGCATGTCGCTTCCCAGCATCTCCAGAAAGGTCACCAGATTCATGTCTCTGGTCGCCTCATTACCGACACTGTTGAAACGGAGGAAGGAAAAAGCCAAACTTACTACAAGGTTTTCGTAACCGCGGCCAATTGGTTATGA

>Glyma.10g031700.3 sequence-type=CDS polypeptide=Glyma.10g031700.3.p locus=Glyma.10g031700 ID=Glyma.10g031700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGGGCTAGTTTATTACAGTCTACAAAACTGGGCTCCAACCAATGGGCCGAAACCCAACCGTTCTGTCCGAAACCGATTACAAATTTTCCAGTTCCCTTATCTATCCGCGCTGTGGAAAGAACGAAGACACGGGAAAGAAAAATGGTGCTAGAACAAGCAGTATCATCATCAAGCACCTTGAGGAACGTTTTCACCAATCCCAAAACCCTAATTTCAAAACCCCAATTCCAAGTCGCCGCTTCCCCTTCATGGAAACCACAGCAGCCGCGCTGGGAAGGGTGGCTGGGGATAAACTTGAAGTGCTCCATGACAACAACAACAACGCCATCATCATACCCTAAGCCCTCGGAGATTCCGTGGCAGAAGGAACTCTGCAACTCCGTCAACCTCATCGGCAACGTCGCCGCCCCCGTCGAAATCAAATACCTCCCCTCCGGCAAGGTCGTCGCCTGGACCCGCCTCTACGTCAAGAAAAGCGCCACACAATCATCGCCCATAAACCTCACTTTCTGGGACGACCTCGCGCATGTCGCTTCCCAGCATCTCCAGAAAGGTCACCAGATTCATGTCTCTGGTCGCCTCATTACCGACACTGTTGAAACGGAGGAAGGAAAAAGCCAAACTTACTACAAGGTTGTTGTTCAACAGCTGAATTTCATTGAGAGGAATTTCTCTTCGGTGTCATCATCGCAGGGTCAAGAGTTTGATTTTGCGATGGCTGGTAGTGGTAGGAAAGTGAGCAATGCTGCAAACAGTACTGGTTCTGTGGTGGAAACATGGAATGCGTTCTTTGCTAACCCAGGGGAGTGGTGGGACAATAGGAACAACAAGCCATGTCTTGCTCAGTTCATAATTGACTGA

Predicted protein sequences of Glyma.10g031700

Limit To All Plant Sequences

>Glyma.10g031700.1.p sequence-type=predicted peptide transcript=Glyma.10g031700.1 locus=Glyma.10g031700 ID=Glyma.10g031700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGASLLQSTKLGSNQWAETQPFCPKPITNFPVPLSIRAVERTKTRERKMVLEQAVSSSSTLRNVFTNPKTLISKPQFQVAASPSWKPQQPRWEGWLGINLKCSMTTTTTPSSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSPINLTFWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERNFSSVSSSQGQEFDFAMAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNRNNKRNPKAPDFKHKDTGEALWIEGRYNPPWVKSQLEILDSRMGSFASQNARMPVGMVAADEIVSF*

>Glyma.10g031700.2.p sequence-type=predicted peptide transcript=Glyma.10g031700.2 locus=Glyma.10g031700 ID=Glyma.10g031700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGASLLQSTKLGSNQWAETQPFCPKPITNFPVPLSIRAVERTKTRERKMVLEQAVSSSSTLRNVFTNPKTLISKPQFQVAASPSWKPQQPRWEGWLGINLKCSMTTTTTPSSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSPINLTFWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVFVTAANWL*

>Glyma.10g031700.3.p sequence-type=predicted peptide transcript=Glyma.10g031700.3 locus=Glyma.10g031700 ID=Glyma.10g031700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGASLLQSTKLGSNQWAETQPFCPKPITNFPVPLSIRAVERTKTRERKMVLEQAVSSSSTLRNVFTNPKTLISKPQFQVAASPSWKPQQPRWEGWLGINLKCSMTTTTTPSSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSPINLTFWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERNFSSVSSSQGQEFDFAMAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNRNNKPCLAQFIID*

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