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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G48060.1 | AT | JGI | N/A | IEA | |
GO:0034220 | GO-bp | ion transmembrane transport | EnsemblGenomes | N/A | IEA |
GO:0042391 | GO-bp | regulation of membrane potential | EnsemblGenomes | N/A | IEA |
GO:0050982 | GO-bp | detection of mechanical stimulus | EnsemblGenomes | N/A | IEA |
GO:0055085 | GO-bp | transmembrane transport | EnsemblGenomes | N/A | IEA |
GO:0071260 | GO-bp | cellular response to mechanical stimulus | EnsemblGenomes | N/A | IEA |
GO:0098655 | GO-bp | cation transmembrane transport | EnsemblGenomes | N/A | IEA |
GO:0016020 | GO-cc | membrane | EnsemblGenomes | N/A | IEA |
GO:0016021 | GO-cc | integral component of membrane | EnsemblGenomes | N/A | IEA |
GO:0016021 | GO-cc | integral component of membrane | JGI | N/A | IEA |
GO:0005261 | GO-mf | cation channel activity | EnsemblGenomes | N/A | IEA |
GO:0008381 | GO-mf | mechanosensitive ion channel activity | EnsemblGenomes | N/A | IEA |
GO:0008381 | GO-mf | mechanically-gated ion channel activity | JGI | N/A | IEA |
KOG1893 | KOG | Uncharacterized conserved protein | JGI | N/A | IEA |
PTHR13167 | Panther | UNCHARACTERIZED | JGI | N/A | IEA |
PTHR13167:SF1 | Panther | JGI | N/A | IEA | |
PF12166 | PFAM | Protein of unknown function (DUF3595) | JGI | N/A | IEA |
Glyma.10g023700 not represented in the dataset |
Glyma.10g023700 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.02g150200 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma10g02875 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.10g023700.1 sequence-type=CDS polypeptide=Glyma.10g023700.1.p locus=Glyma.10g023700 ID=Glyma.10g023700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGGGAAATTTCTCGCCGGTTTCGTGCTGCCTTCGCTGCTTCTGTCAGCTGCTTTAATCAACTGGAGTTTGATCTCTCTCGTTGATTTGATAGCATTTCTTCTCATTCTGTACAATGTATCACAAATAGGATTTCAAATCCGCAGGAGTTTTTTGTTACTGTGGCCGATTGTTATCTTTTCTGTAGTTGCAATACTTTCTCAAGTAACTTATCTGGTAATATGGGCTGTTAAGCCAATGTCATGGAGTATACCAGATGCTTCGTGGGCAAAGTTGATTGGGTTTATGATAGTTCAGTCTTGGAAATCTCCTTATGTAATTTATTTCCTGGTTATACAACTACTAGCTCTTCTTGTTGCTTTGGTTGATATATACGGGAAGAGTCATTTTCTGAAAACATGGCAAGATCCATCTTGGGGTCATTTCTTATCACTTATAGAACATTTAGGTTCTCATCTTCGGGTGGCATCTTGCTTGCTATTGCCTGCTATTCAACTAGTTGTTGGAATTAGCCATCCTTCATGGGCATCACTACCTTTTTTCATTGGTAGTTGTGTTGGTCTTGTGGATTGGTCTTTGACAAGCAACTTTCTTGGGCTTTTTAGGTGGTGGAGGCTTCTTCAGCTGTATGCAGGTTTTAATATATTCCTTCTATACATATATCAACTTCCCATGGAACTTCCAAGTATGATTCGTTGGATGGCTGATTTAATTGGTCTTTACAAAATATCTGCCAATTCTGAGTGGCCTAAAATTTGTTCCAGCATTTCTCTCATGTTTTACTATATAATGCTGTCTTTTATTAAATCTGATTTGGAGGAGATGAGTTTTATTATTTCTAGGACAGATTGTAGCTTGACTGAGCAACTTCTTCCCTCTAAGCATTCATTTTTCATTCGTGAATCAAGATCTGGTGTGAGGCACACAAATGTTTTACTCAGAGGGGCTGTTTTTCGGACTTTTGGTATCAACTTTTTCACGTATGGTTTCCCGGTCTCCTTGTTTGCCCTTTCATTTTGGAGCTTCCATTTTGCAAGCTTATGTGCATTTGGGCTACTTGCTTATGTCGGCTACATTGCCTATGCCTTTCCTTCGTTATTTCGTATGCACAGATTGAATGGGCTGCTTCTTGTCTTCATTCTCTTGTGGGCTGTTAGCACCTATATATTTAATGTGGCATTTACATTTCTGAATTGGAAACTTGGACGGGACATGAAAATCTGGGAGATGGTGGGACTGTGGCACTATCCAATACCTGGATTTTTTTTGCTCGCACAATTTTGTCTTGGAATTTTGGTTGCATTAGGTAATCTTGTGAACAATTCAGTTTTCCTCTGCTTGTCTGATGAGGGTGGGCAATCTTCAAATGACCATTCCTCAGTAAAAGTGGAGGGAGAGACCAAGGTATTGATTGTGGCAACAGTAGCATGGGGACTGCGCAAATGCTCTCGGGCTATCATGCTGACATTGATCTTTTTCATTGCTATTAAACCTGGTTTCATCCATGCTGTATATATGATATTCTTCCTGGTGTACCTTTTGAGTCACAATGTCAGTAGAAAGATGAGACAGGCTTTGATTCTCCTATGCGAGATTCATTTTTCACTATTGTATGTTCTTCAAATTAATTTGATCTCAACTGCACTGGAGAAAAAAGGCTCTTTAAGCATGGAAATTGTAATGCAATTAGGTCTCCGTAACGAAGATAGTGCCTGGGATTTCTTGGAAGTAGCTTTACTTGCTTGCTTCTGTGCAATTCATAACCATGGTTTTGAGATGTTATTTTCATTTTCAGCGATCATACAGCATGCCCCTAGCCCTCCTATTGGATTTGGCATCTTGAAAGCTGGTCTTAACAAATCTGTTCTATTGTCTGTATATTCTTCCTCCTCTGTGAGAAACAGTGATGAAAGTTTGTCTTATGAAAGAAGAATAGCATCATACCTGAGTGCCATTGGGCAGAAATTCCTATCTATATACCGATCATGTGGCTCCCACGTTGCTTTTGTGACTATTCTTCTCACTGTATACATGGTGAGACCTAATTACATATCATTTGGTTACATATTCCTTCTCCTTCTTTGGATTATTGGAAGACAACTTGTTGAGAGAACAAAAAGACAGCTTTGGCTTCCATTGAAAGTGTATGCAATTTTGGTGTTTATCTTCATATATAGCTTGAGCAGCTTCTCAAGCCTAGAGATGTGGTTGTCCAAATTAATAGATCTCTACCTTTATCTGGGGTATGACTCAAAAGCATCTTCTTTTGACAATGTTTGGGAATCTCTGGCAGTCTTAATTGTTATGCAACTTTATAGCTATGAGAGGAGGAAGAACAAGCAGAACAGGCAGGATCACTTGGATCAGTTAGAACCAGGGGCTCTTGGGTTTATCAGGCGATTTATTATCTGGCACAGCCAGAAGATCTTGTTCATTGCTCTGTTTTATGCATCTTTAAACTCAATTAGTGCATTTGGTTTCTTGTATCTTATAGGCCTCATCTTCTGCTCCATTTTACCAAAAACTTCTAGTATCCCATCCAAATCATTCTTAGCATACACAGGTTTTTTGGTGACAGCCGAGTATCTTTTTCAGATGTGGGGTAAGCAGGCTAAAATGTTTCCCGGGCAAAAGTATTCTGATATCTCTCTCTTTTTGGGTTTCCACGTATTCCAGCCTGGCTTTTGGGGTCTAGAATCTGGGTTGAGGGGAAAAGTGCTAGTGATTGTAGCTTGTACTCTTCAATACAATGTCTTCCATTGGCTGGAGAGGATGCCAAATACGGTTCTAAGCAAAGGACAGTGGGAAGAACCTTGTCCTTTGTTTGTTCCCACAGAAGATGCATTCATTGATGATGCTAAGTGTAATGAGGAAAGTAAATCATCATATAATTCACAGCTGCCGTCTGCAATAAAAGAAGGGGTGTCAGGCAATTCACTGCAAATTATTACCTCTGGTCTTTCCCAAGCACCTGATACTCCATCCTCTAAAACAGAAGGTTCTTCTGACAGTAGCAGTAAAAAGTACTCATTCGGGTTTATTTGGGGAAGTTCCAAGGAGAGTCACAAGTGGAACAAAAAGCGGATTGTTGCTTTGAGAAAGGAGCGATTTGAAACGCAGAAAACTGTCTTAAAAGTATATTTGAAATTTTGGATGGAGAATACATTTAATTTATTTGGACTTGAGATAAACATGATATCATTACTACTGGTAAGCTTTGCCTTGTTGAATGCATTATCCATGCTGTATATTGCACTGCTTGCTGCTTGTGTTCTTCTGAATCGGCATATTATACGCAAAGTCTGGCCTATATTTGTCTTTTTGTTTGCTTCCATTCTCATCCTGGAATACTTAGCCATCTGGAAGGATATGTTACCTTTGAATTCTCATGCTTCAAGTGAGATTCGTTGCCGTGACTGCTGGAAAACTTCAACTCTGCATTTCAGTTATTGCAAAAAGTGTTGGCTCGGACTTATTGTTGATGATCCCAGGATGTTGATTAGCTACTTTGTGGTATTTATGCTGGCTTGCTTCAAACTTCGTGCAGATCGCCTGCCTAGCTTTTCAGGATCATCGACATATCGTCAGATTATGTCTCAACGTAGGAACACATTTGTTTGGCGAGATCTATCTTTTGAAACTAAAAGCATGTGGACCTTTGTTGACTATTTGAGGCTTTACTGTTATTGCCATCTGCTAGATCTTGTGCTGATATTAATATTGATTACTGGAACACTTGAGTATGATATTTTGCATCTTGGTTATCTAGCCTTTGCTCTGATATTCTTTCGCATGAGACTTGAAATACTGAAGAAGAAGAACAAAATATTCAAGTTCTTGCGCATATACAACTTTGCTGTTATTATTACTTCTCTTGCTTATCAGTCTCCTTTTATTGGGGGACTTAGTGCTGGGAAGTGTGAGACAGTAAATGACATTTATGAAATGATTGGTTTTTATAAATATGATTATGGTTTTCGGATTACAGCAAGATCTGCAATTGTAGAGATCATCATTTTTGTGCTCGTATCACTTCAGTCATATATGTTTTCCTCGCAAGAGTTTGATTATGTATGTCGCTACCTGGAAGCCGAGCAAATTGGTGCTATTGTGCGTGAGCAAGAGAAAAAGGCTGCATGGAAAACTGCACAATTGCAACAAATTCGTGAAAGTGAGGAGAAAAAACAACAGCGTAATATGCAGGTGGAGAAGATGAAATCTGAAATGCTTAACCTGCAAATACAACTCCTTGGCATGAACACATCCACTAATTGTATTGATGGATTTTCCCACAGCAATGAGGGTCTGAGAAGGAGAAGGAGTGTTTCTCTCGCATCAAATAATGACATTGGAATCCCTGATAAAGAAGATCAGGTTCTGGGGAGACTAGATCATACAATAAGAGAGGATTCTGTTTATCCTATTAATCTTCATGAACCATCTGCTTGTACAAATGTGGAAAGTCCACTAACAGAGGATTATATGAAGCATTCAGTGGATTCTCCTTTTTGTGAAATTACTGAAATAGATATTGATACTTCTTCTAGTGATTCAGGAAAAAAGGAAAAATTTAAAGGGCAAGCAAAAGAAAACCCTCTCAAGTCTGCTGTACAATTAATCGGCGATGGTGTTTCCCAGGTACAGTTCATTGGAAATCAGGCAGTCAATAACCTAGTGAGCTTCCTGAATATTTCACAAGAAGATTCTGATTCAAATGAACACACAAACATTGAGGATAGGATATATGACGAGATGGAGAGTCAGAAAACTCGGCATATATATATGGATCGTTCTTCATCTGTGCAGTCAGATAAGAGTTCTGATGCTGCAAGTCTGCAGTTGGGAAGGATCTTTCGTTATATATGGCACCAGATGCGTTCCAATAATGATGTTGTATGTTACTTTTGCTTTGTTCTTGTGTTCTTATGGAATTTCAGTTTGCTATCAATGGTGTATCTTGGGGCTCTCTTCTTGTATGCTTTATGTGTAAATACTGGTCCAAGTTACATCTTCTGGATTATCATGCTGATCTATACAGAACTTTATATTTTACTTCAGTACCTGTACCAAATTGTCATCCAGCACTGTGGGTTGAGTATCAATCCTCACCTATTACGAGAATTAGGTTTTCCAACACACAAAATCACATCTTCATTTGTTGTCAGTTCATTACCTCTCTTTCTTGTCTATTTATTTACCCTCATTCAAAGCTCCATAACACCCAAAGATGGTGAATGGATGTCTTCTACTGACTTCAAGTTTAAGAGGAATGATCTCCATGCAAAAGATGATCACACTAGTTATAACTGGCAAGGTAGAGCACGGGATCTGCTAAATCAGATGATTATCATGGTAAAACTGATAATCATAAGCTTTTTTAGGTATTGGAAATCACTCACACAAGGAGCAGAATCTCCTCCTTATTTTGTTCAGGTGTCTATGGATGTCAACTTCTGGCCAGAGGATGGGATTCAACCTGAGAGAATTGAATCTGGAATTAATCAGGTGCTCAGAATTGTTCATAATGATAAGTGCAAGGCAAAGAACCCAAATCTTTGCTCTTTTGCTAGCAGGGTTAATGTTCAAAGCATTGAAAGAAGTCAAGAGAAACCCAATGTTGCCTTGGTTGTTTTCGAGGTTGTGTATGCTTCACCTGTAATTGACTGCTCTTCCACAGAATGGAATAAGTCTTTAACTCCAGCATCTGATGTGGCCAAGGAAATCCTCAAAGCTCAGCGTGCTGGATTTGTGGAAGAAATGGGATTCCCTTATCGTATTCTTTCTGTAATTGGTGGAGGCAAGAGAGAAATCGATCTGTATGCCTACATATTTTGTGCAGATCTGATTGTATTCTTTCTTGTTGCCATCTTCTACCAGTCTGTCATAAAAAATAAAAGTGAGTTTCTTGAAGTGTATCAGCTTGAAGACCAGTTTCCAAAAGAATATGTCTTTATGTTGATGGCTATCTTCTTCTTGATTGTGCTTGATCGAATACTATACCTCTGCTCATTTGCCACGTGGAAAGTGGTTTTCTATATTTTCAACCTCGTTCTCTTCACATATTCAGTTACAGAGTATGATTGGCAATTGGAGCCATCCCAACAACATACAGCTCAGTTTGCTCTCCGTGCCATATTTCTTGCTAAGGCAGTTTCTCTAGGACTGCAGGCTATACAAATCCAATATGGCATTCCTCACAAGAGCACATTGTATCGGCAATTTTTGACAAGTGAAGTTTCAAGAATCAATTATTTAGGATATAGACTTTATCGTGCTCTGCCATTCCTTTATGAATTAAGATGTGTTCTTGACTGGTCATGTACAACTACATCCCTCACCATGTATGACTGGCTAAAGCTGGAGGACATAAATGCAAGTTTGTACCTTGTCAAATGTGATTCTGTCTTGAATAGAGGTACACACAAACAGGGGGAGAAGCAAACAAAAATGACCAAATGCTGCAATGGGATATGCCTTTTCTTTGTATTAATCTGTGTTATATGGGCTCCAATGTTGATGTATAGCAGTGGTAACCCAACGAACATTGCAAACCCCATAAAAGATGCTAGCTTTCAGGTTGATATCAAGACAGCAAGTGGAAGGTTGAATTTGTATCAAACTACTCTGTGCGAAAGACTCCAGTGGGATTTACTAAATTCAAATATCAATCCCGATCCCTATGGCTATTTGGGTGCATATAATAAGAATGATATCCAGTTGATATGCTGTCAAGCTGATGCTAGTACATTGTGGCTTGTTCCACTTGTTGTTCGGACCAGATTGATTCAATCCCTTGAATGGAATATCGACATGGAAATTTTTTCCACCTGGATACTCTCAAGGGACAGGCCAAAAGGGAAAGAAATTGTGAAATATGAAAAAGCTGTTGATCCTCAATATCTTCCAACACGGTCTGATGTTCAGAAGGTTCTTAATGGCTCTATGAACAGCTTTAGTATTTATAATGTTTATCCAAGATATTTCCGTGTCACTGGTTCAGGCGATGTTAGACCTTTGGAAGAGGATAATGCTGTTAGTGCTGATCTCATTATAAATCGTGAGCAACTTGAGTGGTGGGCCTTCCGAGATACTAATCCATCAAATTTGAGTAGACTTTGTGGAGGTTTGACGGGACCTATGGCAATCATAGTATCTGAGGAGACACCACCGCAGGGAATTCTTGGCGACACACTCAGCAAGTTCAGCATATGGGGGCTTTACATAACCTTTGTTCTCGCTGTTGGACGTTTTATCAGACTCCAATGTGCTGACTTAAGGATGAGAATTCCCTATGAGAATCTACCTTCCTGTGACAGATTGATAGCGATCTGCGAGGATATATATGCTGCTAGAGCTGAGGGTGAGCTTGGAATTGAAGAGGTCCTTTACTGGACTCTAGTGAAGATATACCGGTCCCCGCACATGCTGCTTGAGTACACAAAACCTGATTAA
>Glyma.10g023700.1.p sequence-type=predicted peptide transcript=Glyma.10g023700.1 locus=Glyma.10g023700 ID=Glyma.10g023700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MGKFLAGFVLPSLLLSAALINWSLISLVDLIAFLLILYNVSQIGFQIRRSFLLLWPIVIFSVVAILSQVTYLVIWAVKPMSWSIPDASWAKLIGFMIVQSWKSPYVIYFLVIQLLALLVALVDIYGKSHFLKTWQDPSWGHFLSLIEHLGSHLRVASCLLLPAIQLVVGISHPSWASLPFFIGSCVGLVDWSLTSNFLGLFRWWRLLQLYAGFNIFLLYIYQLPMELPSMIRWMADLIGLYKISANSEWPKICSSISLMFYYIMLSFIKSDLEEMSFIISRTDCSLTEQLLPSKHSFFIRESRSGVRHTNVLLRGAVFRTFGINFFTYGFPVSLFALSFWSFHFASLCAFGLLAYVGYIAYAFPSLFRMHRLNGLLLVFILLWAVSTYIFNVAFTFLNWKLGRDMKIWEMVGLWHYPIPGFFLLAQFCLGILVALGNLVNNSVFLCLSDEGGQSSNDHSSVKVEGETKVLIVATVAWGLRKCSRAIMLTLIFFIAIKPGFIHAVYMIFFLVYLLSHNVSRKMRQALILLCEIHFSLLYVLQINLISTALEKKGSLSMEIVMQLGLRNEDSAWDFLEVALLACFCAIHNHGFEMLFSFSAIIQHAPSPPIGFGILKAGLNKSVLLSVYSSSSVRNSDESLSYERRIASYLSAIGQKFLSIYRSCGSHVAFVTILLTVYMVRPNYISFGYIFLLLLWIIGRQLVERTKRQLWLPLKVYAILVFIFIYSLSSFSSLEMWLSKLIDLYLYLGYDSKASSFDNVWESLAVLIVMQLYSYERRKNKQNRQDHLDQLEPGALGFIRRFIIWHSQKILFIALFYASLNSISAFGFLYLIGLIFCSILPKTSSIPSKSFLAYTGFLVTAEYLFQMWGKQAKMFPGQKYSDISLFLGFHVFQPGFWGLESGLRGKVLVIVACTLQYNVFHWLERMPNTVLSKGQWEEPCPLFVPTEDAFIDDAKCNEESKSSYNSQLPSAIKEGVSGNSLQIITSGLSQAPDTPSSKTEGSSDSSSKKYSFGFIWGSSKESHKWNKKRIVALRKERFETQKTVLKVYLKFWMENTFNLFGLEINMISLLLVSFALLNALSMLYIALLAACVLLNRHIIRKVWPIFVFLFASILILEYLAIWKDMLPLNSHASSEIRCRDCWKTSTLHFSYCKKCWLGLIVDDPRMLISYFVVFMLACFKLRADRLPSFSGSSTYRQIMSQRRNTFVWRDLSFETKSMWTFVDYLRLYCYCHLLDLVLILILITGTLEYDILHLGYLAFALIFFRMRLEILKKKNKIFKFLRIYNFAVIITSLAYQSPFIGGLSAGKCETVNDIYEMIGFYKYDYGFRITARSAIVEIIIFVLVSLQSYMFSSQEFDYVCRYLEAEQIGAIVREQEKKAAWKTAQLQQIRESEEKKQQRNMQVEKMKSEMLNLQIQLLGMNTSTNCIDGFSHSNEGLRRRRSVSLASNNDIGIPDKEDQVLGRLDHTIREDSVYPINLHEPSACTNVESPLTEDYMKHSVDSPFCEITEIDIDTSSSDSGKKEKFKGQAKENPLKSAVQLIGDGVSQVQFIGNQAVNNLVSFLNISQEDSDSNEHTNIEDRIYDEMESQKTRHIYMDRSSSVQSDKSSDAASLQLGRIFRYIWHQMRSNNDVVCYFCFVLVFLWNFSLLSMVYLGALFLYALCVNTGPSYIFWIIMLIYTELYILLQYLYQIVIQHCGLSINPHLLRELGFPTHKITSSFVVSSLPLFLVYLFTLIQSSITPKDGEWMSSTDFKFKRNDLHAKDDHTSYNWQGRARDLLNQMIIMVKLIIISFFRYWKSLTQGAESPPYFVQVSMDVNFWPEDGIQPERIESGINQVLRIVHNDKCKAKNPNLCSFASRVNVQSIERSQEKPNVALVVFEVVYASPVIDCSSTEWNKSLTPASDVAKEILKAQRAGFVEEMGFPYRILSVIGGGKREIDLYAYIFCADLIVFFLVAIFYQSVIKNKSEFLEVYQLEDQFPKEYVFMLMAIFFLIVLDRILYLCSFATWKVVFYIFNLVLFTYSVTEYDWQLEPSQQHTAQFALRAIFLAKAVSLGLQAIQIQYGIPHKSTLYRQFLTSEVSRINYLGYRLYRALPFLYELRCVLDWSCTTTSLTMYDWLKLEDINASLYLVKCDSVLNRGTHKQGEKQTKMTKCCNGICLFFVLICVIWAPMLMYSSGNPTNIANPIKDASFQVDIKTASGRLNLYQTTLCERLQWDLLNSNINPDPYGYLGAYNKNDIQLICCQADASTLWLVPLVVRTRLIQSLEWNIDMEIFSTWILSRDRPKGKEIVKYEKAVDPQYLPTRSDVQKVLNGSMNSFSIYNVYPRYFRVTGSGDVRPLEEDNAVSADLIINREQLEWWAFRDTNPSNLSRLCGGLTGPMAIIVSEETPPQGILGDTLSKFSIWGLYITFVLAVGRFIRLQCADLRMRIPYENLPSCDRLIAICEDIYAARAEGELGIEEVLYWTLVKIYRSPHMLLEYTKPD*
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