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Report for Sequence Feature Glyma.10g021900

Feature Type:gene_model
Chromosome:Gm10
Start:1904923
stop:1909586
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.10g021900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G03120.1AT JGI N/AIEA
GO:0000387GO-bp spliceosomal snRNP assembly JGI N/AIEA
GO:0000398GO-bp mRNA splicing, via spliceosome JGI N/AIEA
GO:0005685GO-cc U1 snRNP JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
K11095KEGG Spliceosome JGI N/AIEA
PTHR31148PantherFam U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C JGI N/AIEA
PTHR31148:SF1PantherFam U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C JGI N/AIEA
PF06220Pfam U1 zinc finger JGI N/AIEA

Gene model name correspondences to Glyma.10g021900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g02680 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g021900
>Glyma.10g021900.1 sequence-type=CDS polypeptide=Glyma.10g021900.1.p locus=Glyma.10g021900 id=Glyma.10g021900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTCGGTACTACTGTGACTACTGCGACACCTATTTGACCCACGATTCTCCATCTGTTAGAAAGCAGCACAATGCAGGTTACAAACACAAGGCAAATGTGAGGACTTACTACCAGCAATTTGAAGAACAACAAACACAAAGTTTAATTGATCAAAGGATCAAAGAACATCTTGGGCAAGCTGCTGCATTTCAGCAAGTTGGTGTGGCTTATAATCATCTAATGGTTCAGAGGCCTAACCTTCCTCCTGTATTGCCACCACCAAGATTGCCTATTCCTGGAAATGCACAAATACCTGGAGGCCAACCACTAATGCAAGGGATGAGACCACCTGTCTTTCCTAGACCTCCTGGTGCACCAGGATATGTTTCTGCACATACCATGCCTCCGATGTTACCTCCACCTGGTGCTCCCCAGGTTCCAGGTCAACTAAATACCATACCAAGGCCCCCTTCATTAGCTCCCCCTCCAACGGTTCCTGGAAGCACTGCTACACCAGCTTCCAATGGTGCTCCCTCTATGGTATCATCAGCAATGTATCAAGCCAATCCTCCGGCACCTTCATCTGGAAGTTATGATAACTACAATACGAGTGCTCAAGCACCTGAGGTTCACTCTGCATAA

>Glyma.10g021900.2 sequence-type=CDS polypeptide=Glyma.10g021900.2.p locus=Glyma.10g021900 id=Glyma.10g021900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTCGGTACTACTGTGACTACTGCGACACCTATTTGACCCACGATTCTCCATCTGTTAGAAAGCAGCACAATGCAGGTTACAAACACAAGGCAAATGTGAGGACTTACTACCAGCAATTTGAAGAACAACAAACACAAAGTTTAATTGATCAAAGGATCAAAGAACATCTTGGGCAAGCTGCTGCATTTCAGCAAGTTGGTGTGGCTTATAATCATCTAATGGTTCAGAGGCCTAACCTTCCTCCTGTATTGCCACCACCAAGATTGCCTATTCCTGGAAATGCACAAATACCTGGAGGCCAACCACTAATGCAAGGGATGAGACCACCTGTCTTTCCTAGACCTCCTGGTGCACCAGGATATGTTTCTGCACATACCATGCCTCCGATGTTACCTCCACCTGGTGCTCCCCAGGTTCCAGGTCAACTAAATACCATACCAAGGCCCCCTTCATTAGCTCCCCCTCCAACGGTTCCTGGAAGCACTGCTACACCAGCTTCCAATGGTGCTCCCTCTATGGTATCATCAGCAATGTATCAAGCCAATCCTCCGGCACCTTCATCTGGAAGTTATGATAACTACAATACGAGTGCTCAAGCACCTGAGGGTAATCACTGA
Predicted protein sequences of Glyma.10g021900
>Glyma.10g021900.1.p sequence-type=predicted peptide transcript=Glyma.10g021900.1 locus=Glyma.10g021900 id=Glyma.10g021900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGGQPLMQGMRPPVFPRPPGAPGYVSAHTMPPMLPPPGAPQVPGQLNTIPRPPSLAPPPTVPGSTATPASNGAPSMVSSAMYQANPPAPSSGSYDNYNTSAQAPEVHSA*

>Glyma.10g021900.2.p sequence-type=predicted peptide transcript=Glyma.10g021900.2 locus=Glyma.10g021900 id=Glyma.10g021900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAAAFQQVGVAYNHLMVQRPNLPPVLPPPRLPIPGNAQIPGGQPLMQGMRPPVFPRPPGAPGYVSAHTMPPMLPPPGAPQVPGQLNTIPRPPSLAPPPTVPGSTATPASNGAPSMVSSAMYQANPPAPSSGSYDNYNTSAQAPEGNH*






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