SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.10g006400

Feature Type:gene_model
Chromosome:Gm10
Start:628595
stop:630158
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.10g006400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G14380.1AT JGI N/AIEA
PTHR33098PantherFam COTTON FIBER (DUF761) JGI N/AIEA
PTHR33098:SF15PantherFam DUF761 DOMAIN PROTEIN JGI N/AIEA
PF05553Pfam Cotton fibre expressed protein JGI N/AIEA

Gene model name correspondences to Glyma.10g006400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g00910 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g006400
>Glyma.10g006400.1 sequence-type=CDS polypeptide=Glyma.10g006400.1.p locus=Glyma.10g006400 id=Glyma.10g006400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTCACAAGAGGCTAGGAAAAAAGCTTCAACCTGCCAAGAAGGCATGGAAGAGCTTCTCCAACACAGTCCAACACAAACTCCACAAACTCAACATTCCCAATTCCATGAAAACCACCCTTCAACGCCTCCTTCAATCCTTTTACTCCCTTGGCACTGTCATACACTCTAGACTTCATCGTTCATTCACCACCATAAGGCCACGTGGTGGTACTGCCACTTCTAATTACTACCATGTTCAATACAAGCACTGTGCAGCCATACACATAGATGACCTATTTGACAACAAGACTAATAATTCTGCAGTGTCCGTGCATGCCACCAACAAGACAAGTGCTCCTCATGCAACACAAGTGCAAGGGGAAACAACCAAAGGCAAAGAGATCAAAGGGAAAGAGAAAGAGGAGCCTGGTATTTACAAGGGTAATAATTTGGTTGGTCAGTGTCGCAACCAGAGTCGCAGTGGCGGCGGCGAGGGTAGTAGTAGTGGCTTGAACACTATAGAGGATGCATGGAAGGTTGTGGTTGCCAAGTCTCCACAACTACATGTGGATCAAAAGGCAGAAGAATTCATAAGCAAGTTTCGTCAAGATATGAGGCTTCAGAAAGAGAGGTCAATGCTTGAATTCCAGGAGATGCTAGCACGCAGTACCTGA
Predicted protein sequences of Glyma.10g006400
>Glyma.10g006400.1.p sequence-type=predicted peptide transcript=Glyma.10g006400.1 locus=Glyma.10g006400 id=Glyma.10g006400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSHKRLGKKLQPAKKAWKSFSNTVQHKLHKLNIPNSMKTTLQRLLQSFYSLGTVIHSRLHRSFTTIRPRGGTATSNYYHVQYKHCAAIHIDDLFDNKTNNSAVSVHATNKTSAPHATQVQGETTKGKEIKGKEKEEPGIYKGNNLVGQCRNQSRSGGGEGSSSGLNTIEDAWKVVVAKSPQLHVDQKAEEFISKFRQDMRLQKERSMLEFQEMLARST*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo