SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.10g005500

Feature Type:gene_model
Chromosome:Gm10
Start:552560
stop:557431
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.10g005500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G08530.1AT CI51 JGI N/AIEA
1.6.5.3EC JGI N/AIEA
1.6.99.3EC JGI N/AIEA
GO:0051539GO-mf 4 iron, 4 sulfur cluster binding JGI N/AIEA
K03942KEGG Non-alcoholic fatty liver disease JGI N/AIEA
PTHR11780PantherFam NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1 JGI N/AIEA
PF01512Pfam Respiratory-chain NADH dehydrogenase 51 Kd subunit JGI N/AIEA
PF10531Pfam SLBB domain JGI N/AIEA
PF10589Pfam NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JGI N/AIEA

Gene model name correspondences to Glyma.10g005500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g00820 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g005500
>Glyma.10g005500.1 sequence-type=CDS polypeptide=Glyma.10g005500.1.p locus=Glyma.10g005500 id=Glyma.10g005500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGGGGCATTCTTTCCGTAAGGACAGCCTTGGTTCAACATCATAGTGAGAAATTGGGCCTTGGTTTCAGAGTATTTAGCACTCAGGGTGCTTCCACTGCTAGTACCCCACAGCCGCCACCACCACCTCCTCCGCCGGAGAAAACCCATTTTGGCGGCCTTAAGGATGAGGACAGGATATTTACTAACTTATATGGGCTGCATGATCCTTTTCTCAAAGGTGCCATGAAACGTGGGGATTGGCATCGAACGAAAGATTTGGTAGTTAAGGGTACTGATTGGATTGTGAATGAAATGAAGAAGTCTGGCCTCCGTGGGCGTGGTGGTGCTGGTTTCCCTTCGGGTCTCAAATGGTCATTCATGCCAAAAGTATCTGACGGCCGCCCTTCATATCTTGTTGTTAATGCTGATGAAAGTGAACCTGGAACTTGCAAAGACAGGGAAATCATGCGGCATGACCCGCATAAATTGTTGGAAGGTTGCTTGATTGCTGGAGTGGGAATGAGGGCTAGTGCCGCTTACATCTACATCAGGGGTGAATATGTCAATGAACGTAAGAATCTCGAAAAGGCTAGGGAAGAGGCTTATGCTGCTGGTTTGTTGGGTAAGAATGCTTGTGGCTCAGGCTATGATTTTGATGTTCATATCCACTACGGTGCTGGAGCTTATATTTGTGGTGAGGAAACAGCCCTCTTGGAGAGCCTTGAAGGGAAACAAGGTAAACCAAGATTGAAGCCGCCTTTCCCAGCCAATGCTGGGTTGTATGGATGTCCTACCACTGTCACAAATGTGGAAACTGTGGCTGTGTCTCCAACCATTCTAAGGCGTGGACCTGAATGGTTTGCCAGTTTTGGTAGGAAGAACAATGCTGGGACAAAGTTGTTTTGTGTGTCAGGGCATGTGAACAAGCCTTGCACTGTTGAGGAGGAAATGAGTATTCCACTGAAGGAATTGATAGAGAGGCACTGTGGAGGTATTCGAGGAGGATGGGATAATCTACTTGCAGTGATTCCAGGAGGATCATCCGTTCCTCTGATTCCAAAGCATGTATGTGATGATATCTTGATGGATTATGATGCATTGAAGGCTGTTGGGACAGGGTTGGGGACTGCAGCTGTAATTGTGATGGATAAATCTACGGATGTTGTGGATGCTATTGCAAGGCTTTCCTATTTCTACAAGCATGAAAGCTGTGGGCAGTGCACCCCATGCAGAGAGGGGACTGGTTGGCTTTGGACGATCATGGAAAGAATGAAAGTTGGGAATGCCAAGTTAGAAGAAATTGATATGCTTCAGGAGTTGACTAAACAAATTGAAGGGCATACAATTTGTGCCTTGGGTGATGCTGCTGCATGGCCAGTGCAGGGTCTTATCAAGCATTTCAGGCCTGAGCTTGAGAGAAGGATTAGAGAGCATGCAGAAAGGGAGCTTCTGCAGGCCACTGGCTAG

>Glyma.10g005500.2 sequence-type=CDS polypeptide=Glyma.10g005500.2.p locus=Glyma.10g005500 id=Glyma.10g005500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGGGGCATTCTTTCCGTAAGGACAGCCTTGGTTCAACATCATAGTGAGAAATTGGGCCTTGGTTTCAGAGTATTTAGCACTCAGGGTGCTTCCACTGCTAGTACCCCACAGCCGCCACCACCACCTCCTCCGCCGGAGAAAACCCATTTTGGCGGCCTTAAGGATGAGGACAGGATATTTACTAACTTATATGGGCTGCATGATCCTTTTCTCAAAGGTGCCATGAAACGTGGGGATTGGCATCGAACGAAAGATTTGGTAGTTAAGGGTACTGATTGGATTGTGAATGAAATGAAGAAGTCTGGCCTCCGTGGGCGTGGTGGTGCTGGTTTCCCTTCGGGTCTCAAATGGTCATTCATGCCAAAAGTATCTGACGGCCGCCCTTCATATCTTGTTGTTAATGCTGATGAAAGTGAACCTGGAACTTGCAAAGACAGGGAAATCATGCGGCATGACCCGCATAAATTGTTGGAAGGTTGCTTGATTGCTGGAGTGGGAATGAGGGCTAGTGCCGCTTACATCTACATCAGGGGTGAATATGTCAATGAACGTAAGAATCTCGAAAAGGCTAGGGAAGAGGCTTATGCTGCTGGTTTGTTGGGTAAGAATGCTTGTGGCTCAGGCTATGATTTTGATGTTCATATCCACTACGGTGCTGGAGCTTATATTTGTGGTGAGGAAACAGCCCTCTTGGAGAGCCTTGAAGGGAAACAAGGTAAACCAAGATTGAAGCCGCCTTTCCCAGCCAATGCTGGGTTGTATGGATGTCCTACCACTGTCACAAATGTGGAAACTGTGGCTGTGTCTCCAACCATTCTAAGGCGTGGACCTGAATGGTTTGCCAGTTTTGGTAGGAAGAACAATGCTGGGACAAAGTTGTTTTGTGTGTCAGGGCATGTGAACAAGCCTTGCACTGTTGAGGAGGAAATGAGTATTCCACTGAAGGAATTGATAGAGAGGCACTGTGGAGGTATTCGAGGAGGATGGGATAATCTACTTGCAGTGATTCCAGGAGGATCATCCGTTCCTCTGATTCCAAAGCATGTATGTGATGATATCTTGATGGATTATGATGCATTGAAGGCTGTTGGGACAGGGTTGGGGACTGCAGCTGTAATTGTGATGGATAAATCTACGGATGTTGTGGATGCTATTGCAAGGCTTTCCTATTTCTACAAGCATGAAAGCTGTGGGCAGTGCACCCCATGCAGAGAGGGGACTGGTTGGCTTTGGACGATCATGGAAAGAATGAAAGTTGGGAATGCCAAGTTAGAAGAAATTGATATGCTTCAGGAGTTGACTAAACAAATTGAAGGGCATACAATTTGTGCCTTGGGTGATGCTGCTGCATGGCCAGTGCAGGGTCTTATCAAGCATTTCAGGCCTGAGCTTGAGAGAAGGATTAGAGAGCATGCAGAAAGGGAGCTTCTGCAGGCCACTGGCTAG
Predicted protein sequences of Glyma.10g005500
>Glyma.10g005500.1.p sequence-type=predicted peptide transcript=Glyma.10g005500.1 locus=Glyma.10g005500 id=Glyma.10g005500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRGILSVRTALVQHHSEKLGLGFRVFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVVKGTDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLEKAREEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNAGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGIRGGWDNLLAVIPGGSSVPLIPKHVCDDILMDYDALKAVGTGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWTIMERMKVGNAKLEEIDMLQELTKQIEGHTICALGDAAAWPVQGLIKHFRPELERRIREHAERELLQATG*

>Glyma.10g005500.2.p sequence-type=predicted peptide transcript=Glyma.10g005500.2 locus=Glyma.10g005500 id=Glyma.10g005500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRGILSVRTALVQHHSEKLGLGFRVFSTQGASTASTPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVVKGTDWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERKNLEKAREEAYAAGLLGKNACGSGYDFDVHIHYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFASFGRKNNAGTKLFCVSGHVNKPCTVEEEMSIPLKELIERHCGGIRGGWDNLLAVIPGGSSVPLIPKHVCDDILMDYDALKAVGTGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGQCTPCREGTGWLWTIMERMKVGNAKLEEIDMLQELTKQIEGHTICALGDAAAWPVQGLIKHFRPELERRIREHAERELLQATG*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo