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Report for Sequence Feature Glyma.10g005000

Feature Type:gene_model
Chromosome:Gm10
Start:500773
stop:515604
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.10g005000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G33440.1AT JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
K12837KEGG Spliceosome JGI N/AIEA
KOG0120 KOG Splicing factor U2AF, large subunit (RRM superfamily) JGI N/AIEA
PTHR23139PantherFam RNA-BINDING PROTEIN JGI N/AIEA
PTHR23139:SF56PantherFam RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF14259Pfam JGI N/AIEA

Gene model name correspondences to Glyma.10g005000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g00751 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g005000
>Glyma.10g005000.1 sequence-type=CDS polypeptide=Glyma.10g005000.1.p locus=Glyma.10g005000 id=Glyma.10g005000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCAAATCTAATCGTTCAAAGGAGAAGCATGGAAAAAGCAATTGGCTTTCTGAGCATAATTGTGATGAAGAGAGTGCAGCCCGTACAAGGCCATTTAGTTTTGAAGAGATTATGCTTAGAAGAAGAAACAAGGAACTGCTTGGAAACTCACCAAAAGAAAAAGAACTGCTTGAAAATGTAAAAGACCCTGCACATGGATGTTCTTCAGAGAAAATTACTGATCATTTTAAGTCTGCCAGAATCTATAAACATGACAAAAGTTTATCCTTTGGCATGGAGAAACATGTTTCGGAGGAATTAGTGAAAGTAACATCTAGAAAGAAAGTTGAAAGCGCCATTGTAAAGGAAGATGATTTAACTGAAGGGAAAAGAAGGGCAAACCATATTTTGGAAACCAAATCAAGTGCTGGATTAAATAATAAAGCCAGGATAACCAAAGAAAAGACTGAAAAAGAGATGTCTGGTTATAAAAAAAATGAGCGAGTTCATGATAGTTCCGAGTATAGAGCTGGAAATAAGCATTCAAGAGATTCAGTTTATAAGGATAGTTATGTGGAAACAAATAGACCAAAATCTGAAAGGGAAATAAAGAAAAAGAACCACATTGGAGGGGATGAGAATCATAATATGTATGTTACTGAAAAGAGGCATGACAAAGATAGAGATAATAGGTGGAAATTGAAAAAGCGGTTAAGCAATGACTCTGAAGAAGTACCTGAAAAGAAGCATTATAGAGAATCAGATAAGGATAAGCATGCAGGGGGTAGGGCAAAATATGAAAGGGAAACCAAGAGAAAATACAAAAATGGTGATGATGAAACTCAAGACAGGAATACATCAAGAAAACAAGATGCTGTGAAACATCATAACATGCACATTTATGAGAGGAAAGAGAGACGGGTAAAGGTGAAGTCTCATAATGAAGAATTAACAGCAAAGAGGAGATGTTCAAGAAGTCGAGAGCGTGAGGATAGAAGGTCCCCTTCTTTTTCACCAAGGGAGCAAAAACGTACTTATCAAGATGGAGAGCGCAAAGAGTTGTCAATGCATTCCTTGAAAGATAGTTCTAGAACTAAGAACCCTGATATTGATAGAAATAGAGTATCAACTAATGGTTCAAGTGGTCACCATCATCGACATGGTGTCTCCACAAGTGGACTTGGTGGGTATTCTCCAAGGAAGAGGAAAAGTGAAGCCGCTGCCAAGACTCCTTCTCCATCTAAGCATTCTCTTGAGAAGAAACGTGCTGGATGGGATCTTCCCCCTGCAGGGACAAATAATCCTTCTGCTGTTGTTTCTTCAAGTTTTCCAGTATCAAATTGTGCTGTGTTGTCTAATATGCATGATGTGGTTTCAACTAGTTCTCTTGATCTAGCCCTTGTGAAGCCTCTGCCTGTGTCTTTTCCAAGTGATGTATCAACAGGGAAGAATACCAACATTGATTCTGTCCAATTGACACAAGCTACCCGGCCTATTAGAAGGCTTTATCTTGAGAATTTACCTGCTTCTGCTTCTGAGAAAGCTGTGATGGATTGTTTCAATAACCTCTTGCTCTCTGCCCGTGTAAATCATATCCAGCAAGCTCAACCATGCATCTGCTGCATTTTACATAAAGATAAGGGGCAAGCACTTGTAGAGTTCCTTACAGCTGATGATGCATCAGCTGCTCTTTCTTTTGATGGCAGTATGCTATTTGGCTCCATTGTGAAAATTAGACGTCCCAAAGACTACATTGAAGTTGCAACTGGTGAACCAGCGAGATCAGTGGATGTTGCTGTCTCAATAAGTGATGTCGTAATTGATTCACCTCACAAGATCTTCATTGGTGGAATTTCAAATCATCTTTCTTCAGAGATGCTTATGGAGATTGCTGGTGTGTTTGGATCTTTGAAGGCTTACCACTTTGAAACGAAGGTCAACAATGGACCATGTGCTTTTCTCGAGTACGTGGACCACTCTGTTACCATCAAAGCCTGTGCTGGTTTGAATGGTATGAAGCTGGGAGGGGAAGTATTAACAGTTCTTCAGGCTATGCCTGATGCATCACCCTTGGAAAATGCTGGTGAATCACTGTCTTATGGGGTTCCAGAGCATGCAAAACCACTGCTCAGAAAGCCAACACAAGTACTAGAGATTAATAATGTGTTTGCAGCAGACACTATTTTGTCTTTATCCGACATGGCCATTGAAGAAATTTTGGATGATGTACGGTTGGAATGTGCAAGATTTGGGACTATTAAATCAATTAATGTAGTCAAGCATAGCAGTGGCGAGAATTTAGCAACCAAATTAGAAGAATGCAAAGTCATAAACAAAGTGGATGCTAAAGAAGTTTCTCAAGACACAAACTGTATTACTAATAATACAGAATCTAGTTTTTCTGACAAGGCTACTTACCCCGACTTTGAAGGAACAAATGGGATGGAAATCCATGATAACAATGAAATGGAAGAAGTTAAAGTTGACGAGGGTAGCTGTGTTTATGTTGATAAAAATGCTGAAGTTTTTGACTATAAATCATGTAGAGAACACGTGGATGATTCAGCAGTAGAAGATGTGGGGGATAAGGGCATACCTTGTAGTATCATTCAAGAATGTCCTGATCAACAAGATACACCCAATGATGGGCCAGAATTTTATGATAAGATGGTTGCTAACGATATTGATGTGAATATTGAAAATAATATGGAATCTAAAGACACAGTTTGTGCATTTCAGGAAGGCTTTTCTGAATGGGATATCAGTGCAGAATTGGTTAGTCCCCAAAAGAGCATTGACACGGAAGAGGATATTTATGGTCATGTATTTAAACCAGGTTCTGTTCTTGTTGAGTATGGAAGAGCTGAAGCATGTTGTTCGGCAGCACATAGTTTGCACGGACGATTCTTTGATGGCAGAATTGTGACGGTGGGATATGTTGCTCTCAGCCTATACAGATCAAGATTTACAAAATGA

>Glyma.10g005000.2 sequence-type=CDS polypeptide=Glyma.10g005000.2.p locus=Glyma.10g005000 id=Glyma.10g005000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTATGTGGTTGTGATCTCATTGTATTTCCTTTTTTGGCTTCCTCAGGAACAGTATAATCTATCTTTTGATAGTTGTTGCAATTTCAAGATTTCAGCATGTTGTTATGCTCTCCTTAATCTCTTAGTAGGGACACAATTAATTTCTTTTTGTAATTGGTTGGCATCATACAAGATGAGCAAATCTAATCGTTCAAAGGAGAAGCATGGAAAAAGCAATTGGCTTTCTGAGCATAATTGTGATGAAGAGAGTGCAGCCCGTACAAGGCCATTTAGTTTTGAAGAGATTATGCTTAGAAGAAGAAACAAGGAACTGCTTGGAAACTCACCAAAAGAAAAAGAACTGCTTGAAAATGTAAAAGACCCTGCACATGGATGTTCTTCAGAGAAAATTACTGATCATTTTAAGTCTGCCAGAATCTATAAACATGACAAAAGTTTATCCTTTGGCATGGAGAAACATGTTTCGGAGGAATTAGTGAAAGTAACATCTAGAAAGAAAGTTGAAAGCGCCATTGTAAAGGAAGATGATTTAACTGAAGGGAAAAGAAGGGCAAACCATATTTTGGAAACCAAATCAAGTGCTGGATTAAATAATAAAGCCAGGATAACCAAAGAAAAGACTGAAAAAGAGATGTCTGGTTATAAAAAAAATGAGCGAGTTCATGATAGTTCCGAGTATAGAGCTGGAAATAAGCATTCAAGAGATTCAGTTTATAAGGATAGTTATGTGGAAACAAATAGACCAAAATCTGAAAGGGAAATAAAGAAAAAGAACCACATTGGAGGGGATGAGAATCATAATATGTATGTTACTGAAAAGAGGCATGACAAAGATAGAGATAATAGGTGGAAATTGAAAAAGCGGTTAAGCAATGACTCTGAAGAAGTACCTGAAAAGAAGCATTATAGAGAATCAGATAAGGATAAGCATGCAGGGGGTAGGGCAAAATATGAAAGGGAAACCAAGAGAAAATACAAAAATGGTGATGATGAAACTCAAGACAGGAATACATCAAGAAAACAAGATGCTGTGAAACATCATAACATGCACATTTATGAGAGGAAAGAGAGACGGGTAAAGGTGAAGTCTCATAATGAAGAATTAACAGCAAAGAGGAGATGTTCAAGAAGTCGAGAGCGTGAGGATAGAAGGTCCCCTTCTTTTTCACCAAGGGAGCAAAAACGTACTTATCAAGATGGAGAGCGCAAAGAGTTGTCAATGCATTCCTTGAAAGATAGTTCTAGAACTAAGAACCCTGATATTGATAGAAATAGAGTATCAACTAATGGTTCAAGTGGTCACCATCATCGACATGGTGTCTCCACAAGTGGACTTGGTGGGTATTCTCCAAGGAAGAGGAAAAGTGAAGCCGCTGCCAAGACTCCTTCTCCATCTAAGCATTCTCTTGAGAAGAAACGTGCTGGATGGGATCTTCCCCCTGCAGGGACAAATAATCCTTCTGCTGTTGTTTCTTCAAGTTTTCCAGTATCAAATTGTGCTGTGTTGTCTAATATGCATGATGTGGTTTCAACTAGTTCTCTTGATCTAGCCCTTGTGAAGCCTCTGCCTGTGTCTTTTCCAAGTGATGTATCAACAGGGAAGAATACCAACATTGATTCTGTCCAATTGACACAAGCTACCCGGCCTATTAGAAGGCTTTATCTTGAGAATTTACCTGCTTCTGCTTCTGAGAAAGCTGTGATGGATTGTTTCAATAACCTCTTGCTCTCTGCCCGTGTAAATCATATCCAGCAAGCTCAACCATGCATCTGCTGCATTTTACATAAAGATAAGGGGCAAGCACTTGTAGAGTTCCTTACAGCTGATGATGCATCAGCTGCTCTTTCTTTTGATGGCAGTATGCTATTTGGCTCCATTGTGAAAATTAGACGTCCCAAAGACTACATTGAAGTTGCAACTGGTGAACCAGCGAGATCAGTGGATGTTGCTGTCTCAATAAGTGATGTCGTAATTGATTCACCTCACAAGATCTTCATTGGTGGAATTTCAAATCATCTTTCTTCAGAGATGCTTATGGAGATTGCTGGTGTGTTTGGATCTTTGAAGGCTTACCACTTTGAAACGAAGGTCAACAATGGACCATGTGCTTTTCTCGAGTACGTGGACCACTCTGTTACCATCAAAGCCTGTGCTGGTTTGAATGGTATGAAGCTGGGAGGGGAAGTATTAACAGTTCTTCAGGCTATGCCTGATGCATCACCCTTGGAAAATGCTGGTGAATCACTGTCTTATGGGGTTCCAGAGCATGCAAAACCACTGCTCAGAAAGCCAACACAAGTACTAGAGATTAATAATGTGTTTGCAGCAGACACTATTTTGTCTTTATCCGACATGGCCATTGAAGAAATTTTGGATGATGTACGGTTGGAATGTGCAAGATTTGGGACTATTAAATCAATTAATGTAGTCAAGCATAGCAGTGGCGAGAATTTAGCAACCAAATTAGAAGAATGCAAAGTCATAAACAAAGTGGATGCTAAAGAAGTTTCTCAAGACACAAACTGTATTACTAATAATACAGAATCTAGTTTTTCTGACAAGGCTACTTACCCCGACTTTGAAGGAACAAATGGGATGGAAATCCATGATAACAATGAAATGGAAGAAGTTAAAGTTGACGAGGGTAGCTGTGTTTATGTTGATAAAAATGCTGAAGTTTTTGACTATAAATCATGTAGAGAACACGTGGATGATTCAGCAGTAGAAGATGTGGGGGATAAGGGCATACCTTGTAGTATCATTCAAGAATGTCCTGATCAACAAGATACACCCAATGATGGGCCAGAATTTTATGATAAGATGGTTGCTAACGATATTGATGTGAATATTGAAAATAATATGGAATCTAAAGACACAGTTTGTGCATTTCAGGAAGGCTTTTCTGAATGGGATATCAGTGCAGAATTGGTTAGTCCCCAAAAGAGCATTGACACGGAAGAGGATATTTATGGTCATGTATTTAAACCAGGTTCTGTTCTTGTTGAGTATGGAAGAGCTGAAGCATGTTGTTCGGCAGCACATAGTTTGCACGGACGATTCTTTGATGGCAGAATTGTGACGGTGGGATATGTTGCTCTCAGCCTATACAGATCAAGATTTACAAAATGA
Predicted protein sequences of Glyma.10g005000
>Glyma.10g005000.1.p sequence-type=predicted peptide transcript=Glyma.10g005000.1 locus=Glyma.10g005000 id=Glyma.10g005000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSKSNRSKEKHGKSNWLSEHNCDEESAARTRPFSFEEIMLRRRNKELLGNSPKEKELLENVKDPAHGCSSEKITDHFKSARIYKHDKSLSFGMEKHVSEELVKVTSRKKVESAIVKEDDLTEGKRRANHILETKSSAGLNNKARITKEKTEKEMSGYKKNERVHDSSEYRAGNKHSRDSVYKDSYVETNRPKSEREIKKKNHIGGDENHNMYVTEKRHDKDRDNRWKLKKRLSNDSEEVPEKKHYRESDKDKHAGGRAKYERETKRKYKNGDDETQDRNTSRKQDAVKHHNMHIYERKERRVKVKSHNEELTAKRRCSRSREREDRRSPSFSPREQKRTYQDGERKELSMHSLKDSSRTKNPDIDRNRVSTNGSSGHHHRHGVSTSGLGGYSPRKRKSEAAAKTPSPSKHSLEKKRAGWDLPPAGTNNPSAVVSSSFPVSNCAVLSNMHDVVSTSSLDLALVKPLPVSFPSDVSTGKNTNIDSVQLTQATRPIRRLYLENLPASASEKAVMDCFNNLLLSARVNHIQQAQPCICCILHKDKGQALVEFLTADDASAALSFDGSMLFGSIVKIRRPKDYIEVATGEPARSVDVAVSISDVVIDSPHKIFIGGISNHLSSEMLMEIAGVFGSLKAYHFETKVNNGPCAFLEYVDHSVTIKACAGLNGMKLGGEVLTVLQAMPDASPLENAGESLSYGVPEHAKPLLRKPTQVLEINNVFAADTILSLSDMAIEEILDDVRLECARFGTIKSINVVKHSSGENLATKLEECKVINKVDAKEVSQDTNCITNNTESSFSDKATYPDFEGTNGMEIHDNNEMEEVKVDEGSCVYVDKNAEVFDYKSCREHVDDSAVEDVGDKGIPCSIIQECPDQQDTPNDGPEFYDKMVANDIDVNIENNMESKDTVCAFQEGFSEWDISAELVSPQKSIDTEEDIYGHVFKPGSVLVEYGRAEACCSAAHSLHGRFFDGRIVTVGYVALSLYRSRFTK*

>Glyma.10g005000.2.p sequence-type=predicted peptide transcript=Glyma.10g005000.2 locus=Glyma.10g005000 id=Glyma.10g005000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MYVVVISLYFLFWLPQEQYNLSFDSCCNFKISACCYALLNLLVGTQLISFCNWLASYKMSKSNRSKEKHGKSNWLSEHNCDEESAARTRPFSFEEIMLRRRNKELLGNSPKEKELLENVKDPAHGCSSEKITDHFKSARIYKHDKSLSFGMEKHVSEELVKVTSRKKVESAIVKEDDLTEGKRRANHILETKSSAGLNNKARITKEKTEKEMSGYKKNERVHDSSEYRAGNKHSRDSVYKDSYVETNRPKSEREIKKKNHIGGDENHNMYVTEKRHDKDRDNRWKLKKRLSNDSEEVPEKKHYRESDKDKHAGGRAKYERETKRKYKNGDDETQDRNTSRKQDAVKHHNMHIYERKERRVKVKSHNEELTAKRRCSRSREREDRRSPSFSPREQKRTYQDGERKELSMHSLKDSSRTKNPDIDRNRVSTNGSSGHHHRHGVSTSGLGGYSPRKRKSEAAAKTPSPSKHSLEKKRAGWDLPPAGTNNPSAVVSSSFPVSNCAVLSNMHDVVSTSSLDLALVKPLPVSFPSDVSTGKNTNIDSVQLTQATRPIRRLYLENLPASASEKAVMDCFNNLLLSARVNHIQQAQPCICCILHKDKGQALVEFLTADDASAALSFDGSMLFGSIVKIRRPKDYIEVATGEPARSVDVAVSISDVVIDSPHKIFIGGISNHLSSEMLMEIAGVFGSLKAYHFETKVNNGPCAFLEYVDHSVTIKACAGLNGMKLGGEVLTVLQAMPDASPLENAGESLSYGVPEHAKPLLRKPTQVLEINNVFAADTILSLSDMAIEEILDDVRLECARFGTIKSINVVKHSSGENLATKLEECKVINKVDAKEVSQDTNCITNNTESSFSDKATYPDFEGTNGMEIHDNNEMEEVKVDEGSCVYVDKNAEVFDYKSCREHVDDSAVEDVGDKGIPCSIIQECPDQQDTPNDGPEFYDKMVANDIDVNIENNMESKDTVCAFQEGFSEWDISAELVSPQKSIDTEEDIYGHVFKPGSVLVEYGRAEACCSAAHSLHGRFFDGRIVTVGYVALSLYRSRFTK*






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