SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.10g003300

Feature Type:gene_model
Chromosome:Gm10
Start:325758
stop:326640
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.10g003300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G17570.1AT JGI N/AIEA
2.5.1.20EC rubber cis-polyprenylcistransferase JGI N/AIEA
GO:0016765GO-mf transferase activity, transferring alkyl or aryl (other than methyl) groups JGI N/AIEA
KOG1602 KOG Cis-prenyltransferase JGI N/AIEA
PTHR10291PantherFam DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER JGI N/AIEA
PF01255Pfam Putative undecaprenyl diphosphate synthase JGI N/AIEA

Gene model name correspondences to Glyma.10g003300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g00580 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g003300
>Glyma.10g003300.1 sequence-type=CDS polypeptide=Glyma.10g003300.1.p locus=Glyma.10g003300 id=Glyma.10g003300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTTGCCATTTTATCTATGGGTCCTGTGCCAAGTCATATTGCTTTCATCATGGATGGGAATCGAAGGTATGCAAAGAAGAGAAACATGGAAGAAGGTGATGGCCATAAGGCTGGATTTACTGCTCTCATGTCCATACTTAGATACTGTTATGAATTGGGAGTGAAGAGGCCTAAAGAGGTTCAGTCCTTGATGGAATTGATGCGAGAAAAGATTGAGGAGTTGCTTAAACAAGAAAGCCTTATTAATGAATATGGTGTTAGATTACATTTCATTGGAGACATGCAACTATTGACTGAGCCTGTCCGGGTTGCTTTGGAAAAAGCAATGAGAGTTACTGCCCACAACAACCAGAGAGTTCTTTTGATTTGTGTAGCCTATACTTCTCGTCATGAGATTGTGCATGCTGTTCAAGAATTCTTGTCAAAAGAAGCAAAGCTTACAAATGATGCATTTGCAAGAATTGATCTGGGCCTGAAAGGAAACGGTTTTGATTTGCTTTTCCAAGATTCATGTAAAGACTATCTAAATGCAACCAAAGCTTGTAGTAGTGTACCTAACAGAGTGGAAGGTGCCGGAGAGAAAGATGGCATGTTGGAGCATACTGTTGAAAAACATAGCGGTAACAATAGTGAAGCTGAAATCACATCATGCAATGAGATGGTTGAAATGACTGAAGAGGGTGAGGTTCCTTTTGTAAAACTGGTTGATATTGAGAAGAACATGTACATGGCAGTGGCACCTGACCCAGACATCTTGATCCGAACTTCTGGAGAGGCTCAGACTCAGCAATTTTCTTCTATGGCAGACTAG
Predicted protein sequences of Glyma.10g003300
>Glyma.10g003300.1.p sequence-type=predicted peptide transcript=Glyma.10g003300.1 locus=Glyma.10g003300 id=Glyma.10g003300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MFAILSMGPVPSHIAFIMDGNRRYAKKRNMEEGDGHKAGFTALMSILRYCYELGVKRPKEVQSLMELMREKIEELLKQESLINEYGVRLHFIGDMQLLTEPVRVALEKAMRVTAHNNQRVLLICVAYTSRHEIVHAVQEFLSKEAKLTNDAFARIDLGLKGNGFDLLFQDSCKDYLNATKACSSVPNRVEGAGEKDGMLEHTVEKHSGNNSEAEITSCNEMVEMTEEGEVPFVKLVDIEKNMYMAVAPDPDILIRTSGEAQTQQFSSMAD*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo