SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.10g000800

Feature Type:gene_model
Chromosome:Gm10
Start:92722
stop:99016
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.10g000800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G41500.1AT EMB2776,LIS JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K12662KEGG Spliceosome JGI N/AIEA
PTHR19846PantherFam WD40 REPEAT PROTEIN JGI N/AIEA
PF00400Pfam WD domain, G-beta repeat JGI N/AIEA
PF08799Pfam pre-mRNA processing factor 4 (PRP4) like JGI N/AIEA

Gene model name correspondences to Glyma.10g000800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma10g00300 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.10g000800
>Glyma.10g000800.1 sequence-type=CDS polypeptide=Glyma.10g000800.1.p locus=Glyma.10g000800 id=Glyma.10g000800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGTAGAGAAGGAAAATACCACATCAGCTATTACTGCAGAACCCTCTGTATCTGCCTCTGATGGTCAAGATCCTGTTTCTTCTGTTAATGCATCTTTACCGGATCCAATACAACCTGTTATTCCACAGGTTATTGCACCTTCTGTTGTACCTCCTTTAGCTCCAATTCCTGCACTTCCTCCCCCTCGCCCTCTGGCACCGCTTCCAGTTCGGCCACCGGTCATTAGGCCACCTGTGCCACAAAATGGTGAGGTTGGATCAAGTGACTCGGATTCAGACAATGATGACTCAAATGCAAGAATTAACCAGGGGGGCGGGGAGTATGAGATATCCGAAGAGAGTAGACTGGTGAGAGAGCGGCAGGAAAAGGCAATGCAGGAGCTCATGATGAAGAGGCGTGCTGCTGCTCTTGCTGTTCCTACGAATGATATGGCCGTGCGAGCTCGGCTTCGACATCTTGGTGAACCGATAACTCTGTTTGGTGAGAGGGAGATGGAGAGACGGGACAGATTGCGGATGATTATGGCGAAGCTGGATGCAGAAGGTCAGCTGGAGAAGCTGATGAAAGCTCATGAGGAAGAAGAGGCTGCAGCTTCTGCTTCGATAGATGAGGCTGAGGAAGAACTGCAGTATCCTTTTTACACTGAAGGGTCAAAGGCTCTCCTCGATGCCAGAATTTATATTGCTAAATATTCTTTGACAAGGGCTGCATTACGAATTCAACGTGCACAGAGAAGAAGGGATGATCCAGATGAAGATATGGATGCAGAGATGAATTGGGCATTGAAGCAGGCTGGGAATTTGAGTCTTGAATTCAGTGAAATTGGAGATGATCGGCCACTTTCTGGTTGCTCCTTCTCAAGGGATGGAAAATGGCTTGCTACCTGTTCTCTGACAGGAGCTTCCAAGTTGTGGAGCATGCCCAAAATAAAAAAGCATTCCAGCTTTAAGGGTCACACAGAGCGTGCTACTGATGTTGCTTATTCTCCTGTTCATGATCATTTAGCAACTGCCTCTGCTGATCGAACAGCAAAGTATTGGAATCAAGGATCTCTTTTGAAGACATTTGAGGGTCATCTAGACCGTCTTGCACGCATTGCCTTCCATCCATCAGGGAAGTACCTGGGCACTGCTAGCTTTGACAAGACATGGAGATTATGGGACATAGAAACAGGAGACGAGTTGCTTCTTCAAGAAGGCCATAGTAGAAGTGTATATGGTTTGGCTTTCCACAATGATGGATCATTGGCTGCATCTTGTGGACTAGACTCCCTGGCTCGTGTTTGGGACCTCCGAACTGGAAGAAGTATCCTTGCACTGGAAGGTCATGTCAAACCGGTTCTCGGCATCAGTTTTTCACCCAATGGATATCATCTAGCCACGGGTGGTGAAGACAACACTTGTCGGATTTGGGATTTGAGGAAGAAGAAATCCTTTTATACTATTCCTGCTCACTCTAATTTAATTTCACAAGTTAAATTTGAGCCACAAGAAGGTTACTTTTTGGTAACTGCCTCGTATGATATGACTGCTAAGGTTTGGTCAGGCCGTGACTTTAAGCCTGTGAAGACACTATCAGGGCATGAAGCTAAAGTTACTTCTGTGGATGTTCTTGGAGATGGCGGGTATATTGTTACCGTCTCCCATGATCGCACCATAAAGCTGTGGTCCAGCAATACGACTGACGAACAAGCTATGGATGTTGACTAA
Predicted protein sequences of Glyma.10g000800
>Glyma.10g000800.1.p sequence-type=predicted peptide transcript=Glyma.10g000800.1 locus=Glyma.10g000800 id=Glyma.10g000800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEVEKENTTSAITAEPSVSASDGQDPVSSVNASLPDPIQPVIPQVIAPSVVPPLAPIPALPPPRPLAPLPVRPPVIRPPVPQNGEVGSSDSDSDNDDSNARINQGGGEYEISEESRLVRERQEKAMQELMMKRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMAKLDAEGQLEKLMKAHEEEEAAASASIDEAEEELQYPFYTEGSKALLDARIYIAKYSLTRAALRIQRAQRRRDDPDEDMDAEMNWALKQAGNLSLEFSEIGDDRPLSGCSFSRDGKWLATCSLTGASKLWSMPKIKKHSSFKGHTERATDVAYSPVHDHLATASADRTAKYWNQGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDIETGDELLLQEGHSRSVYGLAFHNDGSLAASCGLDSLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGEDNTCRIWDLRKKKSFYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSVDVLGDGGYIVTVSHDRTIKLWSSNTTDEQAMDVD*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo