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Report for Sequence Feature Glyma.09g278900

Feature Type:gene_model
Chromosome:Gm09
Start:49804081
stop:49813239
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.09g278900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G35800.1AT NRPB1,RNA_POL_II_LS,RNA_POL_II_LSRNA_POL_II_LS,RPB1 JGI N/AIEA
2.7.7.6EC DNA-directed RNA polymerase JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated JGI N/AIEA
GO:0006366GO-bp transcription by RNA polymerase II JGI N/AIEA
GO:0005665GO-cc RNA polymerase II, core complex JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003899GO-mf DNA-directed 5'-3' RNA polymerase activity JGI N/AIEA
K03006KEGG DNA repair and recombination proteins JGI N/AIEA
PTHR19376PantherFam DNA-DIRECTED RNA POLYMERASE JGI N/AIEA
PTHR19376:SF37PantherFam DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1 JGI N/AIEA
PF00623Pfam RNA polymerase Rpb1, domain 2 JGI N/AIEA
PF04983Pfam RNA polymerase Rpb1, domain 3 JGI N/AIEA
PF04990Pfam RNA polymerase Rpb1, domain 7 JGI N/AIEA
PF04992Pfam RNA polymerase Rpb1, domain 6 JGI N/AIEA
PF04997Pfam RNA polymerase Rpb1, domain 1 JGI N/AIEA
PF04998Pfam RNA polymerase Rpb1, domain 5 JGI N/AIEA
PF05000Pfam RNA polymerase Rpb1, domain 4 JGI N/AIEA
PF05001Pfam RNA polymerase Rpb1 C-terminal repeat JGI N/AIEA

Gene model name correspondences to Glyma.09g278900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g41550 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g278900
>Glyma.09g278900.1 sequence-type=CDS polypeptide=Glyma.09g278900.1.p locus=Glyma.09g278900 id=Glyma.09g278900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATGTTCGATTCCCTTTCTCCCCAGCTGAGGTCGCCAAAGTTGCCACGGTTCAGTTTGGAATTATCAGTCCCGACGAGATCAGGCAAATGTCTGTGGTGCAAATCGAGCACGGTGAGACAACCGAGAGAGGGAAGCCGAAGATCGGAGGATTGAGCGACCCTCGGCTCGGAACTATTGACAGAAAGCTCAAGTGTGACACTTGTACGGGCAGTATGGCTGAGTGCCCTGGCCATTTTGGCCACTTGGAGCTTGCCAAGCCAATGTTCCATATTGGGTTTTTGAAGACTGTATTAGCTATAATGCGTTGTGTTTGCTTCAACTGCTCCAAAATTCTAGCTAATGAGGATGATCACAAGTTCAAGCTAGCTTTAAGAATCAGGAATCCCAAAAATAGGCTGAGAAAGATTCTGGATGCCTGCAAAAACAAAAGCAAGTGCGAAGGGGGAGATGATATTGACATTCATGGTAAAGATACCGGGGAGCCGGTTAAAAAGAGTCGCGGTGGCTGCGGTGCTCAGCAGCCGAAGATTACTATTGAGGGGATGAAAATAAATGCAGAGTATAAAGCTCAGAGGAAGAAAAGTGATGACCAAGAACAGCTTCCCGAACCCGTGGAAAGGAAACAGACTCTTTCTGCAGAAAGGGTTCTTAGTGTTCTGAAAAGGATAAGCGACGAGGACTGTCAGTTGTTGGGCTTGAATCCTCAGTACGCTCGTCCTGACTGGATGATTTTACAAGTTCTTCCAATTCCTCCTCAACCTGTTAGGCCTTCTGTAATGATGGACACATCCTCCAGGAGTGAGGATGATTTAACTCACCAACTGGCCATGATCATCAGGCACAATGAGAATCTGAAGAGACAGGAGAAGAATGGATCTCCTGCACATATTATTTCCGAGTTTGTGCAGTTATTGCAGTTCCACGTAGCAACATATTTTGATAATGAGTTACCTGGATTGCCAAGGGCTACTCAGAGATCTGGAAGGCCAATCAAATCAATATGTAGCAGGCTCAAGGCAAAAGAAGGCCGGATTAGAGGTAACTTGATGGGTAAAAGAGTTGATTTTTCTGCTCGAACAGTCATTACACCTGATCCAACTATCAACATTGATCAATTGGGAGTACCATGGAGTATTGCGTTGAATCTAACATACCCTGAGACTGTGACTCCATATAACATTGAAAGGTTGAAGGAACTTGTTGAGTATGGACCCCATCCTCCACCTGGAAAAACTGGTGCCAAGTATATCATTCGTGATGACGGACAAAGACTTGATCTCAGATATTTAAAGAAAAGCAGTGATCACCATTTGGAGCTTGGCTACAAGGTCGAGCGTCATTTGAATGATGGAGACTTTGTTCTCTTCAATCGTCAGCCTAGTCTTCATAAAATGTCTATCATGGGACACAGAATCAAAATCATGCCTTATTCTACTTTCCGGCTTAACTTGTCCGTAACTTCACCATATAATGCTGATTTTGACGGGGACGAAATGAATATGCATGTTCCTCAGAGTTTAGAAACCAGAGCTGAGGTGTTAGAGCTGATGATGGTGCCTAAATGCATTGTGTCACCACAGTCAAACAAGCCAGTGATGGGAATTGTCCAAGATACACTTCTAGGATGCAGGAAAATCACCAAGAGAGACACTTTCATCACAAAGGATGTTTTTATGAACATATTGATGTGGTGGGAAGATTTTGATGGGAAAGTTCCTGCTCCTACAATATTGAAGCCAGAACCATTGTGGACAGGGAAACAAGTTTTCAATCTCATCATTCCTAAACAAATAAATCTAATTAGATTTTCGAGCTGGCATAGTGATGATGAACGGGGACCCATAACCCCTGGGGATACCATGGTTAGAATTGAAAAAGGGGAACTACTTACCGGAACACTTTGCAAAAAGACTCTTGGAGCATCCGCCGGAAGTCTCATTCATGTGATTTGGGAAGAGGTTGGCCCTGATGCAGCTCGGAAATTTCTTGGTCATACTCAGTGGCTTGTAAACTACTGGCTTTTGCAGAATGCTTTTAGCATGGGAATTGGTGATACAATAGCTGATGCTTCCACTATGGAAGCCATAAATCAGACTATTTCATTAGCTAAGGAGAAAGTGAAACAACTTATCAGGGATGCTCAAGAGAAGAAGTTGGAGGCCGAACCTGGTCGGACAATGATGGATTCATTTGAAAATAGAGTGAACCAGACTCTAAATAAAGCTCGTGATGATGCTGGAAACAGTGCTGGAAATAGTTTATCTGAGAGCAACAATCTGAAAGCAATGGTGACAGCTGGTTCGAAAGGAAGTAACATCAACATATCTCAAATGACTGCTTGTGTGGGGCAACAGAACGTTGAGGGGAAGCGAATTCCATACGGATTCGTAGACCGGACATTGCCTCACTTCACAAAAGATGATCATGGGCCTGAAAGTCGTGGCTTTGTGGAGAACTCATATCTACGTGGACTGACCCCTCAAGAGTTCTTTTTCCATGCCATGGGTGGTAGGGAAGGTCTTATTGATACTGCCGTGAAGACCTCCGAAACCGGGTACATTCAGAGGCGACTCGTGAAGGCTATGGAGGACATCATGCTTAAATATGATGGGACAGTTAGAAACTCTTTGGGAGACGTCATACAATTTCTCTACGGAGAAGATGGTATGGACGCTATTTGGATTGAAACACAGAAGCTGGATACCCTTAAAATGAAGAAAACAGAATTTGATAGGGTGTTTAGGTATGAATTTGACGAGGAAAACTGGAAGCCTAATTACATGCTTCAAGAGCCTGTAGAAGACTTGAAAACCATCAGAGAGTTTCGTAATGTGTTTGAGGCAGAAGTTCAAAAGCTTGAAGCTGATAGACATCAACTCGCAATAGAGATAGCCTCTAATGGTGACAATTCTCTGCCACTGCCTGTTAACCTCAAGAGGCTTATCTGGAATGCTCAGAAGACATTTAAGGTTGACTTCCGAAGGCCTTCTGATATGCATCCAATGGAAATTGTGGAAGCCATCGATAAGCTCCAGGAGCGGCTTAAGGTTGTTCCCGGCGAGGACGCCTTGAGTCAAGAAGCTCAAAAGAATGCTACTCTCCTCTTCAATATTCTGCTCCGCAGCACTTTCGCCAGTAAAAGGGTCTTGGAGGAATACAGGCTTTCTCGCGAGTCATTTGAGTGGGTAGTCGGAGAAATAGAATCAAGGTTCTTGCAGTCGCTTGTGGTCCCCGGAGAAATGATTGGTGTCGTGGCTGCACAATCAATTGGTGAACCTGCTACTCAGATGACTCTCAACACTTTCCACTTTGCCGGTGTCAGCGCAAAGAACGTTACTCTTGGTGTTCCTAGGTTAAGGGAACTCATTAATGTCGCCAAGAGTATTAAAACGCCTTCTCTCTCTGTGTACTTGAAACCTGATGCTGGTAAGACTAAAGAGAGAGCCAAGACTGTGCAGTGTGCTTTAGAATATACCACTCTCAGGAGTGTCACTCAAGCTACAGAGGTGTGGTATGATCCAGACCCGATGAGTACAATAATTGAAGAGGATGTGGATTTTGTCATGTCCTACTATGAAATGCCCGATGAAGAAGTTGCTCTTGAAAAAATCTCACCTTGGTTGCTTCGCGTGGAGCTGAATCGTGAAATGATGGTGGATAAGAAGTTGAGTATGGCTGACATTGCACAGAAGATTAACCTTGAATTTGATGATGATTTGAGTTGTATATTTAACGATGACAATGCTGAAAAACTTATACTTCGTATCCGTATAATGAATGATGATGCACCAAAGGGTGAGGTTCAGGATGAATCCGCTGAAGATGATGTTTTCTTGAAGAAAATAGAAACCAACATGCTGACTGAAATGACTCTACGAGGAATCCCAGACATAAACAAGGTTTTTATAAAAAATGCGAAAGTTCAGAAGTTTGATGAGAACGAAGGTTTTAAGTCTAATGGGGAATGGATGCTTGATACCGAAGGTGTGAACCTGCTAGCTGTGATGTGCCATGAAGATGTTGACGCGACAAGGACAACAAGCAACCACTTGATTGAGGTTATTGAAGTTCTTGGTATTGAGGCAGTTAGGCGATCTCTACTGGATGAATTGAGAATTGTAATTTCGTTTGACGGTTCTTATGTAAATTACAGGCATTTGGCTATTCTATGTGAAACAATGACGTATAGGGGGCATTTAATGGCAATAACACGTCACGGCATCAACAGGAATGATACAGGGCCAATGATGAGATGCTCATTTGAAGAGACAGTTGATATTCTGCTTGATGCTGCAGCATATGCAGAGACTGATAGCTTGAGGGGAGTCACAGAAAACATAATCTTAGGGCAGCTCGCCCCCATTGGGACAGGCCAATGTGCCTTGTATCTTAATGATGGCATGCTGAAGAATGCCATTGAGCTACAACTGCCTAGTTATACAGATGGTCTTGATTTCGGTATCATGTCTGGAGCAACTCCATATCATGAAGGCACCATGATGTCTCCCAGTTATCTGTTGAGCCCCAATTTACGCCTGTCTCCTAGTTCGGATGCACAGTTTTCGCCTTATGTTGGCGGCATGGCGTTTTCTCCTTCTTCATCTCCTGGTTATAGTCCATCATCCCCCGGCTATAGTCCATCTTCGCCCGGGTACAGCCCCACGTCGCCCGGTTACAGTCCCACTTCCCCCGGTTACAGTCCCACCTCTCCAACTTATAGCCCTAGCTCTCCCGGATATAGTCCAACAAGTCCAGCTTATTCGCCTACATCTCCCAGCTACAGCCCCACCTCACCTGCATACAGCCCAACTTCTCCTGCATACAGCTCCACTTCACCTGCATACAGTCCTACTTCTCCATCATACAGCCCCACTTCACCTGCATATAGTCCTACTTCTCCATCATATAGCCTGACATCTCCTTCCTACAGTCCAACTTCACCCTCTTACAGCCCCACGTCTCCCTCATATAGTCCTACCTCTCCTGCATACAGCCCCACATCTCCCTCATATAGCCCAACATCTCCATCTTATAGTCCTACTTCCCCCAGTTACAATCCACAATCAGCAAAATATAGTCCTTCGTTAGCTTATTCTCCAAGCAGTCCAAGATTGTCTCCCACATCTCCAAACTATAGCCCGACGTCTCCCTCGTATTCACCAACATCTCCTTCTTATTCTCCATCAAGCCCAACATACAGTCCCAGCAGTCCATATAATTCTGGTGTGAGCCCGGACTATAGCCCAACTTCCCCCCAATTTAGTCCCAGTGCGGGTTACTCACCAAGTCAACCCGGTTACTCACCGTCGTCAACCAGCCAGGACACTCCACAAACTAGTGACAAGGATGAATGA
Predicted protein sequences of Glyma.09g278900
>Glyma.09g278900.1.p sequence-type=predicted peptide transcript=Glyma.09g278900.1 locus=Glyma.09g278900 id=Glyma.09g278900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDVRFPFSPAEVAKVATVQFGIISPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTIDRKLKCDTCTGSMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILANEDDHKFKLALRIRNPKNRLRKILDACKNKSKCEGGDDIDIHGKDTGEPVKKSRGGCGAQQPKITIEGMKINAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLSVLKRISDEDCQLLGLNPQYARPDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQEKNGSPAHIISEFVQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSLETRAEVLELMMVPKCIVSPQSNKPVMGIVQDTLLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPTILKPEPLWTGKQVFNLIIPKQINLIRFSSWHSDDERGPITPGDTMVRIEKGELLTGTLCKKTLGASAGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSMGIGDTIADASTMEAINQTISLAKEKVKQLIRDAQEKKLEAEPGRTMMDSFENRVNQTLNKARDDAGNSAGNSLSESNNLKAMVTAGSKGSNINISQMTACVGQQNVEGKRIPYGFVDRTLPHFTKDDHGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMLKYDGTVRNSLGDVIQFLYGEDGMDAIWIETQKLDTLKMKKTEFDRVFRYEFDEENWKPNYMLQEPVEDLKTIREFRNVFEAEVQKLEADRHQLAIEIASNGDNSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVPGEDALSQEAQKNATLLFNILLRSTFASKRVLEEYRLSRESFEWVVGEIESRFLQSLVVPGEMIGVVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLRELINVAKSIKTPSLSVYLKPDAGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVMSYYEMPDEEVALEKISPWLLRVELNREMMVDKKLSMADIAQKINLEFDDDLSCIFNDDNAEKLILRIRIMNDDAPKGEVQDESAEDDVFLKKIETNMLTEMTLRGIPDINKVFIKNAKVQKFDENEGFKSNGEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRIVISFDGSYVNYRHLAILCETMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAAYAETDSLRGVTENIILGQLAPIGTGQCALYLNDGMLKNAIELQLPSYTDGLDFGIMSGATPYHEGTMMSPSYLLSPNLRLSPSSDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSSTSPAYSPTSPSYSPTSPAYSPTSPSYSLTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPTSPQFSPSAGYSPSQPGYSPSSTSQDTPQTSDKDE*






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