Report for Sequence Feature Glyma.09g276900
| Feature Type: | gene_model |
| Chromosome: | Gm09 |
| Start: | 49626989 |
| stop: | 49631715 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
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Annotations for Glyma.09g276900
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT1G55520.1 | AT |
ATTBP2,TBP2 |
JGI | N/A | IEA |
| GO:0006352 | GO-bp |
DNA-templated transcription, initiation |
JGI | N/A | IEA |
| GO:0003677 | GO-mf |
DNA binding |
JGI | N/A | IEA |
| K03120 | KEGG |
Transcription machinery |
JGI | N/A | IEA |
| KOG3302 |
KOG |
TATA-box binding protein (TBP), component of TFIID and TFIIIB |
JGI | N/A | IEA |
| PTHR10126 | PantherFam |
TATA-BOX BINDING PROTEIN |
JGI | N/A | IEA |
| PF00352 | Pfam |
Transcription factor TFIID (or TATA-binding protein, TBP) |
JGI | N/A | IEA |
Gene model name correspondences to Glyma.09g276900 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma09g41330 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.09g276900
>Glyma.09g276900.1 sequence-type=CDS polypeptide=Glyma.09g276900.1.p locus=Glyma.09g276900 id=Glyma.09g276900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGAACAAGCATTGGAAGGTAGCCAACCTGTGGATTTAACAAAGCACCCTTCTGGGATTGTGCCTACCCTTCAAAATATTGTGTCAACGGTCAATTTGGACTGTAAGTTGGAGCTTAAATCAATTGCACTTCAAGCTCGAAATGCAGAATACAATCCCAAGCGTTTTGCTGCTGTTATTATGAGGATCAGGGAACCAAAAACTACTGCACTCATTTTTGCATCTGGCAAGATGGTCTGTACTGGAGCCAAGAGTGAGCAACAGTCTAAATTGGCGGCAAGGAAGTATGCTAGAATTATTCAAAAGCTTGGTTTCCCAGCTAAATTTAAGGATTTTAAGATTCAGAACATTGTTGGCTCTTGTGATGTCAAGTTCCCCATTCGACTTGAGGGTCTTGCCTATTCCCATGGTGCTTTCTCAAGTTATGAACCAGAGCTGTTTCCAGGACTAATCTATCGCATGAAGCAACCCAAGATAGTCTTGCTTATATTTGTCTCTGGAAAAATTGTTCTGACAGGAGCCAAGGTTAGAGATGAGACTTACACAGCTTTTGAGAACATATATCCAGTGCTTACTGAGTTCAGGAAAAACCAACAATGA
>Glyma.09g276900.3 sequence-type=CDS polypeptide=Glyma.09g276900.3.p locus=Glyma.09g276900 id=Glyma.09g276900.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGAACAAGCATTGGAAGGTAGCCAACCTGTGGATTTAACAAAGCACCCTTCTGGGATTGTGCCTACCCTTCAAAATATTGTGTCAACGGTCAATTTGGACTGTAAGTTGGAGCTTAAATCAATTGCACTTCAAGCTCGAAATGCAGAATACAATCCCAAGCGTTTTGCTGCTGTTATTATGAGGATCAGGGAACCAAAAACTACTGCACTCATTTTTGCATCTGGCAAGATGGTCTGTACTGGAGCCAAGAGTGAGCAACAGTCTAAATTGGCGGCAAGGAAGGATTTTAAGATTCAGAACATTGTTGGCTCTTGTGATGTCAAGTTCCCCATTCGACTTGAGGGTCTTGCCTATTCCCATGGTGCTTTCTCAAGTTATGAACCAGAGCTGTTTCCAGGACTAATCTATCGCATGAAGCAACCCAAGATAGTCTTGCTTATATTTGTCTCTGGAAAAATTGTTCTGACAGGAGCCAAGGTTAGAGATGAGACTTACACAGCTTTTGAGAACATATATCCAGTGCTTACTGAGTTCAGGAAAAACCAACAATGA
Predicted protein sequences of Glyma.09g276900
>Glyma.09g276900.1.p sequence-type=predicted peptide transcript=Glyma.09g276900.1 locus=Glyma.09g276900 id=Glyma.09g276900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAEQALEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ*
>Glyma.09g276900.3.p sequence-type=predicted peptide transcript=Glyma.09g276900.3 locus=Glyma.09g276900 id=Glyma.09g276900.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAEQALEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLELKSIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDETYTAFENIYPVLTEFRKNQQ*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
