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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G00550.1 | AT | digalactosyl diacylglycerol deficient 2 | JGI | N/A | IEA |
GO:0009058 | GO-bp | biosynthetic process | JGI | N/A | IEA |
GO:0019375 | GO-bp | galactolipid biosynthetic process | EnsemblGenomes | N/A | IEA |
GO:0009707 | GO-cc | chloroplast outer membrane | EnsemblGenomes | N/A | IEA |
GO:0035250 | GO-mf | UDP-galactosyltransferase activity | EnsemblGenomes | N/A | IEA |
PTHR12526 | Panther | GLYCOSYLTRANSFERASE | JGI | N/A | IEA |
PTHR12526:SF201 | Panther | JGI | N/A | IEA | |
PF00534 | PFAM | Glycosyl transferases group 1 | JGI | N/A | IEA |
PWY-401 | SoyCyc9 | galactolipid biosynthesis I | Plant Metabolic Network | ISS | |
GN7V-67423 | SoyCyc9-rxn | digalactosyldiacylglycerol synthase | Plant Metabolic Network | ISS |
Glyma.09g263300 not represented in the dataset |
Glyma.09g263300 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.18g228900 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma09g39911 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.09g263300.2 sequence-type=transcript locus=Glyma.09g263300 ID=Glyma.09g263300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 TCTGTGATAAATCAATGGTTTGGTTTTTCATTCCTCTTGGCTGAGGATTGGTTGAAAAGCAAACCAGAAATTTGGAAGCAGACATTCATCACGACACTGCTTACTCAGGATAGAGAGCATATTCTGTTTCTCTCTCCTTAATTCCCTTCCTTTCTCTCTCTTCGCCATTCATTTTCCACCAACTTATTCTCTCTCTCTGATCCCTTCCTTCTCCTCTTTTAATTGACCCCTTCAAGTTCAAGTGATCATTTAGTTATCCTCTAAAGCAGTATTTTGCTGGTGTTTTCCTCTGCAATGGAGTTCTGAATCTATGATGATGAGATTTCTTATTTGAACCCACCCAAGAAACAGATGGATAAGAAAGAGCATATTGCAATTTTTACTACTGCTAGCCTTCCATGGTTGACAGGAACTGCTGTGAACCCTTTGTTTCGTGCTGCGTATCTTGCCAAAAGTGGGGAAAGAGATGTCACTTTGGTGATCCCTTGGTTATCTCTGAAAGATCAAGGACTAGTATATCCCAACAATATTAAATTTGCTTCACCCTCAGAGCACGAGAAGTATATCCGCCAATGGCTAGAGGAGAGAGTTGGATTTACATGTGGTTTCAGCATACAGTTTTATCCAGGAAAGTTTTCTAGAGATAAAAGGAGCATTCTTGCTGTTGGGGATATTTCGGAGATTATCCCTGACAAAGTTGCAGATATTGCTGTTCTAGAGGAGCCCGAGCACTTGACATGGTATCACCATGGGAAAAGATGGAAGACTAAATTCAGGCTAGTTATAGGGATAATTCATACGAATTATTTGGAGTATGTGAAGAGAGAAAAGAATGGAACCATGCAAGCATTTTTGATGAAATATTTAAACAACTGGGTTGTTGGTATATATTGTCACAAGGTAATTAGATTATCTGCCGCCACCCAGGATTACACTGGCTCCATCATCTGTAATGTTCATGGAGTTAATCCGAAATTCCTTGAGATTGGCAAGAAAAAGAGGGAGCAACAACAGAAGGGAGAGCAGGCCTTTACCAAAGGTGCCTACTTTATTGGGAAGATGATATGGAGCAAAGGCTACAAGGAACTACTCCAACTTCTTAAAGATCATCAAAAGGAATTATCTGCTCTTGAGGTTGATTTATTTGGCAGTGGAGAGGACTCAAATGAAGTTCAAAAAGCTGCAGAAAAGTTGGAACTAGCAGTTAGCGTTCACCCAGCTCGTGATCATGCTGATGCTCGATTTCATGATTACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCACAACAACAGCAGAAGCTTTAGCAATGGGCAAAATTGTTGTTTGTGCTAACCATCCCTCAAACGACTTTTTCAAGCAGTTCCCAAATTGTTGGACGTACGATGACGATGATGAATTTGTTAAACTCACACTCAAGGCACTGGCTGAACAACCTGCCCAGCCTACTGATGCTCAGAGACATGACCTATCTTGGGAGGCGGCCACGAAACGGTTTCTTAAGGCCGCCGACTTGGACAAGCCATTAGATAGAAAATTGTTAAGAACAAGTTCAAACTTTCTGGCTGCCTCCATAAATTTGCAAGAGAAAGTAGATGAAGCATCAGCATATGTGCATCATGTAGCTTCTGGGTTTGAAGTATCGAGAAGAATCTTCGGTGCCATTCCAGATAGCCTGCAGCCAGATGAAGAGCTACGCAAGGAACTTGGGTTGACTGAAGCTTCCACGAAATAAGGTTAAAGAAAAATGATTTTGGAATGTTGTGATGTTAATTAAAATTTCTAGAGATTCTAACTTCTATTCATAATCGGTTACCCGTGCATTCACAAGGGTCGTGCTTGTCTTTACACATGTTTTAAAATAATTTATGTATATAATTATTTGTTTAAAAATAAATAGAGCATATGTTTACATTTTATTGT
>Glyma.09g263300.1 sequence-type=CDS polypeptide=Glyma.09g263300.1.p locus=Glyma.09g263300 ID=Glyma.09g263300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGATAAGAAAGAGCATATTGCAATTTTTACTACTGCTAGCCTTCCATGGTTGACAGGAACTGCTGTGAACCCTTTGTTTCGTGCTGCGTATCTTGCCAAAAGTGGGGAAAGAGATGTCACTTTGGTGATCCCTTGGTTATCTCTGAAAGATCAAGGACTAGTATATCCCAACAATATTAAATTTGCTTCACCCTCAGAGCACGAGAAGTATATCCGCCAATGGCTAGAGGAGAGAGTTGGATTTACATGTGGTTTCAGCATACAGTTTTATCCAGGAAAGTTTTCTAGAGATAAAAGGAGCATTCTTGCTGTTGGGGATATTTCGGAGATTATCCCTGACAAAGTTGCAGATATTGCTGTTCTAGAGGAGCCCGAGCACTTGACATGGTATCACCATGGGAAAAGATGGAAGACTAAATTCAGGCTAGTTATAGGGATAATTCATACGAATTATTTGGAGTATGTGAAGAGAGAAAAGAATGGAACCATGCAAGCATTTTTGATGAAATATTTAAACAACTGGGTTGTTGGTATATATTGTCACAAGGTAATTAGATTATCTGCCGCCACCCAGGATTACACTGGCTCCATCATCTGTAATGTTCATGGAGTTAATCCGAAATTCCTTGAGATTGGCAAGAAAAAGAGGGAGCAACAACAGAAGGGAGAGCAGGCCTTTACCAAAGGTGCCTACTTTATTGGGAAGATGATATGGAGCAAAGGCTACAAGGAACTACTCCAACTTCTTAAAGATCATCAAAAGGAATTATCTGCTCTTGAGGTTGATTTATTTGGCAGTGGAGAGGACTCAAATGAAGTTCAAAAAGCTGCAGAAAAGTTGGAACTAGCAGTTAGCGTTCACCCAGCTCGTGATCATGCTGATGCTCGATTTCATGATTACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCACAACAACAGCAGAAGCTTTAGCAATGGGCAAAATTGTTGTTTGTGCTAACCATCCCTCAAACGACTTTTTCAAGCAGTTCCCAAATTGTTGGACGTACGATGACGATGATGAATTTGTTAAACTCACACTCAAGGCACTGGCTGAACAACCTGCCCAGCCTACTGATGCTCAGAGACATGACCTATCTTGGGAGGCGGCCACGAAACGGTTTCTTAAGGCCGCCGACTTGGACAAGCCATTAGATAGAAAATTGTTAAGAACAAGTTCAAACTTTCTGGCTGCCTCCATAAATTTGCAAGAGAAAGTAGATGAAGCATCAGCATATGTGCATCATGTAGCTTCTGGGTTTGAAGTATCGAGAAGAATCTTCGGTGCCATTCCAGATAGCCTGCAGCCAGATGAAGAGCTACGCAAGGAACTTGGGTTGACTGAAGCTTCCACGAAATAA >Glyma.09g263300.2 sequence-type=CDS polypeptide=Glyma.09g263300.2.p locus=Glyma.09g263300 ID=Glyma.09g263300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGATAAGAAAGAGCATATTGCAATTTTTACTACTGCTAGCCTTCCATGGTTGACAGGAACTGCTGTGAACCCTTTGTTTCGTGCTGCGTATCTTGCCAAAAGTGGGGAAAGAGATGTCACTTTGGTGATCCCTTGGTTATCTCTGAAAGATCAAGGACTAGTATATCCCAACAATATTAAATTTGCTTCACCCTCAGAGCACGAGAAGTATATCCGCCAATGGCTAGAGGAGAGAGTTGGATTTACATGTGGTTTCAGCATACAGTTTTATCCAGGAAAGTTTTCTAGAGATAAAAGGAGCATTCTTGCTGTTGGGGATATTTCGGAGATTATCCCTGACAAAGTTGCAGATATTGCTGTTCTAGAGGAGCCCGAGCACTTGACATGGTATCACCATGGGAAAAGATGGAAGACTAAATTCAGGCTAGTTATAGGGATAATTCATACGAATTATTTGGAGTATGTGAAGAGAGAAAAGAATGGAACCATGCAAGCATTTTTGATGAAATATTTAAACAACTGGGTTGTTGGTATATATTGTCACAAGGTAATTAGATTATCTGCCGCCACCCAGGATTACACTGGCTCCATCATCTGTAATGTTCATGGAGTTAATCCGAAATTCCTTGAGATTGGCAAGAAAAAGAGGGAGCAACAACAGAAGGGAGAGCAGGCCTTTACCAAAGGTGCCTACTTTATTGGGAAGATGATATGGAGCAAAGGCTACAAGGAACTACTCCAACTTCTTAAAGATCATCAAAAGGAATTATCTGCTCTTGAGGTTGATTTATTTGGCAGTGGAGAGGACTCAAATGAAGTTCAAAAAGCTGCAGAAAAGTTGGAACTAGCAGTTAGCGTTCACCCAGCTCGTGATCATGCTGATGCTCGATTTCATGATTACAAATTGTTTCTTAATCCAAGCACAACAGATGTGGTCTGCACAACAACAGCAGAAGCTTTAGCAATGGGCAAAATTGTTGTTTGTGCTAACCATCCCTCAAACGACTTTTTCAAGCAGTTCCCAAATTGTTGGACGTACGATGACGATGATGAATTTGTTAAACTCACACTCAAGGCACTGGCTGAACAACCTGCCCAGCCTACTGATGCTCAGAGACATGACCTATCTTGGGAGGCGGCCACGAAACGGTTTCTTAAGGCCGCCGACTTGGACAAGCCATTAGATAGAAAATTGTTAAGAACAAGTTCAAACTTTCTGGCTGCCTCCATAAATTTGCAAGAGAAAGTAGATGAAGCATCAGCATATGTGCATCATGTAGCTTCTGGGTTTGAAGTATCGAGAAGAATCTTCGGTGCCATTCCAGATAGCCTGCAGCCAGATGAAGAGCTACGCAAGGAACTTGGGTTGACTGAAGCTTCCACGAAATAA
>Glyma.09g263300.1.p sequence-type=predicted peptide transcript=Glyma.09g263300.1 locus=Glyma.09g263300 ID=Glyma.09g263300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MDKKEHIAIFTTASLPWLTGTAVNPLFRAAYLAKSGERDVTLVIPWLSLKDQGLVYPNNIKFASPSEHEKYIRQWLEERVGFTCGFSIQFYPGKFSRDKRSILAVGDISEIIPDKVADIAVLEEPEHLTWYHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGTMQAFLMKYLNNWVVGIYCHKVIRLSAATQDYTGSIICNVHGVNPKFLEIGKKKREQQQKGEQAFTKGAYFIGKMIWSKGYKELLQLLKDHQKELSALEVDLFGSGEDSNEVQKAAEKLELAVSVHPARDHADARFHDYKLFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCWTYDDDDEFVKLTLKALAEQPAQPTDAQRHDLSWEAATKRFLKAADLDKPLDRKLLRTSSNFLAASINLQEKVDEASAYVHHVASGFEVSRRIFGAIPDSLQPDEELRKELGLTEASTK* >Glyma.09g263300.2.p sequence-type=predicted peptide transcript=Glyma.09g263300.2 locus=Glyma.09g263300 ID=Glyma.09g263300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MDKKEHIAIFTTASLPWLTGTAVNPLFRAAYLAKSGERDVTLVIPWLSLKDQGLVYPNNIKFASPSEHEKYIRQWLEERVGFTCGFSIQFYPGKFSRDKRSILAVGDISEIIPDKVADIAVLEEPEHLTWYHHGKRWKTKFRLVIGIIHTNYLEYVKREKNGTMQAFLMKYLNNWVVGIYCHKVIRLSAATQDYTGSIICNVHGVNPKFLEIGKKKREQQQKGEQAFTKGAYFIGKMIWSKGYKELLQLLKDHQKELSALEVDLFGSGEDSNEVQKAAEKLELAVSVHPARDHADARFHDYKLFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCWTYDDDDEFVKLTLKALAEQPAQPTDAQRHDLSWEAATKRFLKAADLDKPLDRKLLRTSSNFLAASINLQEKVDEASAYVHHVASGFEVSRRIFGAIPDSLQPDEELRKELGLTEASTK*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||