SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.09g249800

Feature Type:gene_model
Chromosome:Gm09
Start:47466976
stop:47471950
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.09g249800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G47390.2AT PHS1 JGI N/AIEA
GO:0009231GO-bp riboflavin biosynthetic process JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
GO:0008703GO-mf 5-amino-6-(5-phosphoribosylamino)uracil reductase activity JGI N/AIEA
K11752KEGG Quorum sensing JGI N/AIEA
KOG1018 KOG Cytosine deaminase FCY1 and related enzymes JGI N/AIEA
PTHR11079PantherFam CYTOSINE DEAMINASE FAMILY MEMBER JGI N/AIEA
PF00383Pfam Cytidine and deoxycytidylate deaminase zinc-binding region JGI N/AIEA
PF01872Pfam RibD C-terminal domain JGI N/AIEA
PF08719Pfam NADAR domain JGI N/AIEA

Gene model name correspondences to Glyma.09g249800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g38520 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g249800
>Glyma.09g249800.1 sequence-type=CDS polypeptide=Glyma.09g249800.1.p locus=Glyma.09g249800 id=Glyma.09g249800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCACTGTCGTGTCTCACTCTCACTGCCAACCCTTCTTCCGTTATCTGCAAATGCAAAGTGTCCCTCCCCACCGCCCCCCACGCGCTCGACGCCACCTACATCCGACGCGCTGCCCACCTCGCCGACAAATCCGCCGGCTTCACCTCCCCCCACCCCAACTTCGGCTGCGTCATCGTTTCCCCCTCCGGCAAAGTCTCCGGCGAGGGCTACCTCTACGCCCAGGGCACCACTGCCGCCGAGGTCCAGGCCGTCGCCTCCGCCGCCGAACTCTGCCGCGGGGCCACCGCCTACCTCAACCTGGAGCCCAGCGACTGCCATGGCGACCACAGCGCCGTGTCTGCTCTGCTCCAGGGAGGGGTCAAAAGGGTTGTGATTGGAATGAGGCATCCCCTGCAACATCTCCGTGGCAATGCTGTCCGTGCACTCAGAAACCAAGGACTGCATGTTGATCTTCTTGGAGAGGATCTCACTAGTAATCTCATTGAGGATGCACAGAAAGAGTGTCTTCTTGTCAATGCACCTTTGATTTGTAGAGCTTCTTTGCGTGTTCCCTTTTCTGTTCTTAAGTATGCCATGACCCTTGATGGAAAAATTGCTGCTACCACTGGCCATGCATCATGGATAAGCTGCAAGCAGTCTAGAAATCTAGTTTTTGAGTTAAGAGGCCGAAGCGATGCTGTTATTGTGGGAGGAAATACAGTTCGAAGGGACAATCCAAGACTAACTGCCAGACATGGAGGGGGGCATATGCCAATGCGCATTGTAATGACCCAGACTCTTGATCTTCCAGAGGAAGCAAACCTGTGGGATATGTCTGAGGTTTCTACCATAGTTGTAACACAAAGGGGTGCAAGGAGGAGTTTCCAGAAGCTGCTTGCATCAAAAGGAGTTGAGGTTGTGGAGTTTGACATATTGAATCCCCGAGAAGTAATGGAGTATTTCCATGATTGTGGATATCTTTCAATTTTATGGGAATGCGGAGGAACATTGGCTGCATCTGCTATTTCATCTGGAGTAATTCACAAGGTTTATGCTTTTGTTGCTCCTAAAATTATTGGTGGAAAGAATGCACCATCTCCTGTGGGTGATCTTGGGATGGTTGCGATGTCACAGGCTTTAAATCTAATTGATGTTTGCTATGAGCAGGTTGGGCCCGACATGCTTATTAGTGGATTTCTTCAGCCCTTACCAGACATGGTACCTGTAATCCCATCACTCAATGAAACTTTTGTTGTTGATCCCACTGTCTCACCATATGAGTCAAGGATCATATTTTTCTATAAAACATGGGATCCTTACGGTGTGTTGTCAAATTACTCTCCTCATCCCATTCAAATGCCTGATGAAAATGGTGATTGTGTGACTTGGATGAGTGTTGAGCATTACTACCAGGCTCACAAGTTTATTCGGGTGGATGATCCTTTGGCACAAGATTGTGTTGAAAGGATTAAATCTGCAATAAGTCCAGAAGAAGCTGCAAGAATAGGAAGGTCAATGCAAAAGCAGAAACCTTATCTGATAAGGTCTGACTGGGACAACATAAAGATCGATGTCATGTACAGGGCACTGAAATGCAAGTTCTCAATCTACCCGCAATTGAATTCTATGCTGCTATCTACTGCTGGTTCTGTTCTAGTTGAGGCTTCACCACATGATCTGTTTTGGGGTAGAGGCCGAGACGGAGAAGGCTTAAATTATCTTGGAAAACTGTTGATGAAATTGAGATCAGAGTTTCTTGGGGAGTCTTCATCATCAAGTGAGACCCCTAGTTTAACTGTATAA

>Glyma.09g249800.2 sequence-type=CDS polypeptide=Glyma.09g249800.2.p locus=Glyma.09g249800 id=Glyma.09g249800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGGCATCCCCTGCAACATCTCCGTGGCAATGCTGTCCGTGCACTCAGAAACCAAGGACTGCATGTTGATCTTCTTGGAGAGGATCTCACTAGTAATCTCATTGAGGATGCACAGAAAGAGTGTCTTCTTGTCAATGCACCTTTGATTTGTAGAGCTTCTTTGCGTGTTCCCTTTTCTGTTCTTAAGTATGCCATGACCCTTGATGGAAAAATTGCTGCTACCACTGGCCATGCATCATGGATAAGCTGCAAGCAGTCTAGAAATCTAGTTTTTGAGTTAAGAGGCCGAAGCGATGCTGTTATTGTGGGAGGAAATACAGTTCGAAGGGACAATCCAAGACTAACTGCCAGACATGGAGGGGGGCATATGCCAATGCGCATTGTAATGACCCAGACTCTTGATCTTCCAGAGGAAGCAAACCTGTGGGATATGTCTGAGGTTTCTACCATAGTTGTAACACAAAGGGGTGCAAGGAGGAGTTTCCAGAAGCTGCTTGCATCAAAAGGAGTTGAGGTTGTGGAGTTTGACATATTGAATCCCCGAGAAGTAATGGAGTATTTCCATGATTGTGGATATCTTTCAATTTTATGGGAATGCGGAGGAACATTGGCTGCATCTGCTATTTCATCTGGAGTAATTCACAAGGTTTATGCTTTTGTTGCTCCTAAAATTATTGGTGGAAAGAATGCACCATCTCCTGTGGGTGATCTTGGGATGGTTGCGATGTCACAGGCTTTAAATCTAATTGATGTTTGCTATGAGCAGGTTGGGCCCGACATGCTTATTAGTGGATTTCTTCAGCCCTTACCAGACATGGTACCTGTAATCCCATCACTCAATGAAACTTTTGTTGTTGATCCCACTGTCTCACCATATGAGTCAAGGATCATATTTTTCTATAAAACATGGGATCCTTACGGTGTGTTGTCAAATTACTCTCCTCATCCCATTCAAATGCCTGATGAAAATGGTGATTGTGTGACTTGGATGAGTGTTGAGCATTACTACCAGGCTCACAAGTTTATTCGGGTGGATGATCCTTTGGCACAAGATTGTGTTGAAAGGATTAAATCTGCAATAAGTCCAGAAGAAGCTGCAAGAATAGGAAGGTCAATGCAAAAGCAGAAACCTTATCTGATAAGGTCTGACTGGGACAACATAAAGATCGATGTCATGTACAGGGCACTGAAATGCAAGTTCTCAATCTACCCGCAATTGAATTCTATGCTGCTATCTACTGCTGGTTCTGTTCTAGTTGAGGCTTCACCACATGATCTGTTTTGGGGTAGAGGCCGAGACGGAGAAGGCTTAAATTATCTTGGAAAACTGTTGATGAAATTGAGATCAGAGTTTCTTGGGGAGTCTTCATCATCAAGTGAGACCCCTAGTTTAACTGTATAA
Predicted protein sequences of Glyma.09g249800
>Glyma.09g249800.1.p sequence-type=predicted peptide transcript=Glyma.09g249800.1 locus=Glyma.09g249800 id=Glyma.09g249800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALSCLTLTANPSSVICKCKVSLPTAPHALDATYIRRAAHLADKSAGFTSPHPNFGCVIVSPSGKVSGEGYLYAQGTTAAEVQAVASAAELCRGATAYLNLEPSDCHGDHSAVSALLQGGVKRVVIGMRHPLQHLRGNAVRALRNQGLHVDLLGEDLTSNLIEDAQKECLLVNAPLICRASLRVPFSVLKYAMTLDGKIAATTGHASWISCKQSRNLVFELRGRSDAVIVGGNTVRRDNPRLTARHGGGHMPMRIVMTQTLDLPEEANLWDMSEVSTIVVTQRGARRSFQKLLASKGVEVVEFDILNPREVMEYFHDCGYLSILWECGGTLAASAISSGVIHKVYAFVAPKIIGGKNAPSPVGDLGMVAMSQALNLIDVCYEQVGPDMLISGFLQPLPDMVPVIPSLNETFVVDPTVSPYESRIIFFYKTWDPYGVLSNYSPHPIQMPDENGDCVTWMSVEHYYQAHKFIRVDDPLAQDCVERIKSAISPEEAARIGRSMQKQKPYLIRSDWDNIKIDVMYRALKCKFSIYPQLNSMLLSTAGSVLVEASPHDLFWGRGRDGEGLNYLGKLLMKLRSEFLGESSSSSETPSLTV*

>Glyma.09g249800.2.p sequence-type=predicted peptide transcript=Glyma.09g249800.2 locus=Glyma.09g249800 id=Glyma.09g249800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRHPLQHLRGNAVRALRNQGLHVDLLGEDLTSNLIEDAQKECLLVNAPLICRASLRVPFSVLKYAMTLDGKIAATTGHASWISCKQSRNLVFELRGRSDAVIVGGNTVRRDNPRLTARHGGGHMPMRIVMTQTLDLPEEANLWDMSEVSTIVVTQRGARRSFQKLLASKGVEVVEFDILNPREVMEYFHDCGYLSILWECGGTLAASAISSGVIHKVYAFVAPKIIGGKNAPSPVGDLGMVAMSQALNLIDVCYEQVGPDMLISGFLQPLPDMVPVIPSLNETFVVDPTVSPYESRIIFFYKTWDPYGVLSNYSPHPIQMPDENGDCVTWMSVEHYYQAHKFIRVDDPLAQDCVERIKSAISPEEAARIGRSMQKQKPYLIRSDWDNIKIDVMYRALKCKFSIYPQLNSMLLSTAGSVLVEASPHDLFWGRGRDGEGLNYLGKLLMKLRSEFLGESSSSSETPSLTV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo