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Report for Sequence Feature Glyma.09g249100

Feature Type:gene_model
Chromosome:Gm09
Start:47020464
stop:47026577
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.09g249100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G24090.1AT glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0006002GO-bp fructose 6-phosphate metabolic process EnsemblGenomesN/AIEA
GO:0006047GO-bp UDP-N-acetylglucosamine metabolic process EnsemblGenomesN/AIEA
GO:0006487GO-bp protein N-linked glycosylation EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:1901135GO-bp carbohydrate derivative metabolic process EnsemblGenomesN/AIEA
GO:0004360GO-mf glutamine-fructose-6-phosphate transaminase (isomerizing) activity EnsemblGenomesN/AIEA
GO:0030246GO-mf carbohydrate binding JGI N/AIEA
GO:0097367GO-mf carbohydrate derivative binding EnsemblGenomesN/AIEA
KOG1268 KOG Glucosamine 6-phosphate synthetases, contain amidotransferase and phosphosugar isomerase domains JGI N/AIEA
PTHR10937Panther GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING JGI N/AIEA
PF00310PFAM Glutamine amidotransferases class-II JGI N/AIEA
PF01380PFAM SIS domain JGI N/AIEA
UDPNACETYLGALSYN-PWYSoyCyc9 UDP-N-acetyl-D-glucosamine biosynthesis II Plant Metabolic Network ISS
GN7V-40605SoyCyc9-rxn glutamine-fructose-6-phosphate transaminase (isomerizing) Plant Metabolic Network ISS

Expression Patterns of Glyma.09g249100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.09g249100
ParalogEvidenceComments
Glyma.18g243300 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.09g249100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g38460 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g249100
>Glyma.09g249100.1 sequence-type=CDS polypeptide=Glyma.09g249100.1.p locus=Glyma.09g249100 ID=Glyma.09g249100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTGTGGAATATTTGCGTATCTGAATTACGACGTGAACAGAGACAGACGATACATCTTGCAGGTTCTCTTCAATGGCCTCAGCAGATTGGAGTACCGTGGATACGATTCCGCAGGCATCGCGATCGACGATTCCAATTTCTCTCCCCTTGTTTTCCGTCAAGAAGGAAACATTGAATCGCTCGTCAAATCGGTTTATCAAGAAGTGGGAGAAACTGAACTGAACTTGGGGGAATGCTTCGGCACTCACGCGGGAATCGCGCACACTCGCTGGGCGACTCACGGAGAGCCTGCGCCTCGGAACAGTCATCCTCAGACCTCTGGTCCTGGTAACGAGTTCTTGGTTGTTCACAATGGAGTCATCACTAATTACGAGGTTTTGAAGGAAACGCTGCTCCGACATGGCTTCACCTTTGAATCTGAAACTGACACTGAGGTCATTCCCAAGCTTGCAAAGTTTGTTTATGACAAGGCGAATGAAGCAGCCGGTGGTCAGGTTGTTACCTTCAGCCAAGTTGTTCTTGAAGTTATGAGGCATCTTGAAGGAGCTTATGCCCTTATTTTCAAAAGTCTACATTATCCTAATGAATTGATTGCCTGCAAGCGTGGTAGCCCACTGCTGCTAGGTGTTAAAGAATTGACAGAAAATAAAGAAAATAGTTCAGCATTTGAGGATAACAAATTCCTATCAAAAGATGGAAAGCCTAGAGAATTGTTTTTGTCCAGTGATGCCAATGCTGTGGTTGAGCATACAAAGAAAGTGCTAGTTATTGAGGATGGTGAAGTAGTTCATCTCAAGGATGGTGGGGTTTCTATTTTGAAATATGAGAATGACATGGGAGAACATGGCGCTTCTCTTTCCAGAGCTTTCTCAGTGCGACGTGCATTATCTGTTCTAGAGATGGAGGTTGAGCAAATAAATAAAGGTAATTATGAGCATTATATGCAAAAGGAAATTCATGAGCAGCCAGAGTCTCTAACAACCACAATGAGGGGGAGGCTTATACATCGAGGATCTAACAAATCCAAGTCTGTTCTGTTGGGTGGGCTGAAGGATCACCTCAAAACAATTAGGCGAAGTAGAAGGATACTTTTCATTGGTTGTGGTACAAGTTATAATGCTGCTTTGGCAGCTAGACCCATCTTGGAAGAACTTTCTGGTGTTCCTGTTACTATGGAAATTGCTAGTGATCTATTGGATCGGGAGGGACCAATATACCGGGAGGATACTGCCGTTTTTGTTAGTCAATCTGGTGAAACTGCAGACACTTTACTTGCACTGCAATATGCTTTAGACAATGGTGCATTGTGTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAAGGCATATACAAGTCAAATAGTAGTGATGGTCATGTTAGCTCTTGCAATAGGAGGCGATACAATTTCAAATCAAGCCAGAAGAGAAGCTATCATAGATGGTCTTTTTGACCTGCCAAATAAAGTCAGAGAGGTGCTGAAGCTTGATCAGGAGATGAAGGATCTAGCCAAGCAGTTGATTGCTGAGCAGTCTCTTCTTGTCTTTGGGAGAGGATACAACTATGCAACTGCTCTCGAGGGAGCTTTGAAAGTAAAGGAAGTGGCACTAATGCATAGTGAAGGGATGCTTGCTGGTGAAATGAAGCATGGTCCTTTGGCATTAGTGGATGAAAATCTCCCAATTGCTGTTGTAGCTACCCGTGATGCCTGCTTCAGCAAACAGCAGTCTGTTATTCAGCAACTTAATGCCCGCAGAGGTCGTCTGATAGTTATGTGTTCAAAAGGGGATGCTGCCTCTGTATGCCCTAATGAATCTTGTAGGGTAATTGAAGTCCCACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGTTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCTCGTAATCTTGCCAAGAGTGTCACAACGCAATAG
Predicted protein sequences of Glyma.09g249100
>Glyma.09g249100.1.p sequence-type=predicted peptide transcript=Glyma.09g249100.1 locus=Glyma.09g249100 ID=Glyma.09g249100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MCGIFAYLNYDVNRDRRYILQVLFNGLSRLEYRGYDSAGIAIDDSNFSPLVFRQEGNIESLVKSVYQEVGETELNLGECFGTHAGIAHTRWATHGEPAPRNSHPQTSGPGNEFLVVHNGVITNYEVLKETLLRHGFTFESETDTEVIPKLAKFVYDKANEAAGGQVVTFSQVVLEVMRHLEGAYALIFKSLHYPNELIACKRGSPLLLGVKELTENKENSSAFEDNKFLSKDGKPRELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGGVSILKYENDMGEHGASLSRAFSVRRALSVLEMEVEQINKGNYEHYMQKEIHEQPESLTTTMRGRLIHRGSNKSKSVLLGGLKDHLKTIRRSRRILFIGCGTSYNAALAARPILEELSGVPVTMEIASDLLDREGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMVMLALAIGGDTISNQARREAIIDGLFDLPNKVREVLKLDQEMKDLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGMLAGEMKHGPLALVDENLPIAVVATRDACFSKQQSVIQQLNARRGRLIVMCSKGDAASVCPNESCRVIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGHNVDQPRNLAKSVTTQ*






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