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Report for Sequence Feature Glyma.09g234000

Feature Type:gene_model
Chromosome:Gm09
Start:45647037
stop:45648549
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.09g234000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G71310.1AT cobalt ion binding JGI N/AIEA
GO:0000373GO-bp Group II intron splicing EnsemblGenomesN/AIEA
GO:0000724GO-bp double-strand break repair via homologous recombination EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0005739GO-cc mitochondrion EnsemblGenomesN/AIEA
GO:0003677GO-mf DNA binding EnsemblGenomesN/AIEA
GO:0003690GO-mf double-stranded DNA binding EnsemblGenomesN/AIEA
GO:0003697GO-mf single-stranded DNA binding EnsemblGenomesN/AIEA
GO:0050897GO-mf cobalt ion binding EnsemblGenomesN/AIEA

Expression Patterns of Glyma.09g234000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g234000 not represented in the dataset
Glyma.09g234000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.09g234000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g36860 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g234000
>Glyma.09g234000.1 sequence-type=CDS polypeptide=Glyma.09g234000.1.p locus=Glyma.09g234000 ID=Glyma.09g234000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCATCAGCGTGTCTGAAATTGAGAAATTTGAGCAGAGGAGGAGGAGCATTTAGGTGTGGGCGTTATTCGAAGTTGATACATGCAGAGAGAGAGAGAGAAGAAGAAGAAGAGGAGGTGCCGAGTTCTAGAATCTCTAGGCCGCTCTCTGAAATACTGAAAGAGCTGAACAAGAAAGTACCGGACTCCCTCGTCAAAACCCGCCTCCAGAAAGATCAAGATGCCTCCCCCATCAGATTCATTCCCTGGCATGTTGTCAATCGCATTTTGAACTTACACGCTCCTGAGTGGTCTGGTGAGGTTCGGAATATCACCTATTCCGCCGATGCCAAGTCTGTCTCCGTTGTCTACCGAGTTACCCTTTATGGGACTGATGCTGAGATATTTAGGGAATCAACTGGTACTGCTTCAGTAGACGACACAAGTTATGGAGATCCTGTACAGAAGGCAGAAGCAATGGCTTTTCGTAGAGCTTGTGCACGCTTTGGACTGGGGCTCCACCTTTATCATGAAGATGCATCATAA
Predicted protein sequences of Glyma.09g234000
>Glyma.09g234000.1.p sequence-type=predicted peptide transcript=Glyma.09g234000.1 locus=Glyma.09g234000 ID=Glyma.09g234000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASACLKLRNLSRGGGAFRCGRYSKLIHAEREREEEEEEVPSSRISRPLSEILKELNKKVPDSLVKTRLQKDQDASPIRFIPWHVVNRILNLHAPEWSGEVRNITYSADAKSVSVVYRVTLYGTDAEIFRESTGTASVDDTSYGDPVQKAEAMAFRRACARFGLGLHLYHEDAS*






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