SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.09g230700

Feature Type:gene_model
Chromosome:Gm09
Start:45817477
stop:45821238
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.09g230700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G25180.1AT JGI N/AIEA
GO:0006383GO-bp transcription by RNA polymerase III JGI N/AIEA
GO:0005666GO-cc RNA polymerase III complex JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003899GO-mf DNA-directed 5'-3' RNA polymerase activity JGI N/AIEA
K03026KEGG Transcription machinery JGI N/AIEA
PTHR13408PantherFam DNA-DIRECTED RNA POLYMERASE III JGI N/AIEA
PF05132Pfam RNA polymerase III RPC4 JGI N/AIEA

Gene model name correspondences to Glyma.09g230700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g36500 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g230700
>Glyma.09g230700.1 sequence-type=CDS polypeptide=Glyma.09g230700.1.p locus=Glyma.09g230700 id=Glyma.09g230700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCCAGATCAGGGCACTTCAAAAGCCCGGAAGCCCAAGTTCAAACCCAGGAATCTCAAAGCAGTCCGAGCTCCCAAAACCGAAGCGGATGATAAGCGAAACGAAGATAGCGAAGTGCCTCGAGCTCTCTCGCGTCGACGACATGAAAATCCTGCAAAACGCGAGCCTAAAGTCGAAAGAAAATCTAGCGTGGAAGTTGCATTTAGTCTTGGAAGTTCATCATCACATTCCCTCAGGACATATGGCACAAGCAAATCTATAGATAGTGGCACAAGCAGTGGTTCACCATCTAAATATTTTGCCAATGAACAAATTCGTTCAATTGCTACTGAGGATCAAAATGATGCTTCTAATGCATCTGCCAGGAAAATCAAAAGAGAGTACAAGGAACCATGGGATTATGAAAACTCTTACTATCCGACTACTCTTCCTTTGAGGAAGCCAAATTCTGGAGATCCAGAAATTCTTGATGAGAAAGAATTTGGTGAAGCTGCTACTAGTGTGGAGTATGATGAGAATACTGTTAATTCTGCTGCAGAACTCGAGATCTTGGAGAGTGAGGAACAAAGGATGTTTTTCTTTCAGATTCCTACTCCTCTGCCTATGGACAAGCAGAGTAATAAGGGGAAGGAGAAAATTGGTACATCAACAGTATCGGGAGAGGCCACAAAGTCAAAGAATGCCTTGGAAGAGTTGCCGAGGGGATATATGGGCAAAATGCTGGTGTACAAGAGTGGAGCAATCAAACTAAAATTAGGAGAAACTCTGCTCGACGTGTCTCCAGGTTCAAATTGTCGATGTGTTCAAGATGTTATGGCTGTGAACACTGCACAGAAACAGTGTTGCAATCTTGGCGAGATTAGCAAAAGGGTTGTTGTGGTTCCCGATCTTGATTCAATTGAACTGTAA

>Glyma.09g230700.2 sequence-type=CDS polypeptide=Glyma.09g230700.2.p locus=Glyma.09g230700 id=Glyma.09g230700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCCAGATCAGGGCACTTCAAAAGCCCGGAAGCCCAAGTTCAAACCCAGGAATCTCAAAGCAGTCCGAGCTCCCAAAACCGAAGCGGATGATAAGCGAAACGAAGATAGCGAAGTGCCTCGAGCTCTCTCGCGTCGACGACATGAAAATCCTGCAAAACGCGAGCCTAAAGTCGAAAGAAAATCTAGCGTGGAAGTTGCATTTAGTCTTGGAAGTTCATCATCACATTCCCTCAGGACATATGGCACAAGCAAATCTATAGATAGTGGCACAAGCAGTGGTTCACCATCTAAATATTTTGCCAATGAACAAATTCGTTCAATTGCTACTGAGGATCAAAATGATGCTTCTAATGCATCTGCCAGGAAAATCAAAAGAGAGTACAAGGAACCATGGGATTATGAAAACTCTTACTATCCGACTACTCTTCCTTTGAGGAAGCCAAATTCTGGAGATCCAGAAATTCTTGATGAGAAAGAATTTGGTGAAGCTGCTACTAGTGTGGAGTATGATGAGAATACTGTTAATTCTGCTGCAGAACTCGAGATCTTGATTCCTACTCCTCTGCCTATGGACAAGCAGAGTAATAAGGGGAAGGAGAAAATTGGTACATCAACAGTATCGGGAGAGGCCACAAAGTCAAAGAATGCCTTGGAAGAGTTGCCGAGGGGATATATGGGCAAAATGCTGGTGTACAAGAGTGGAGCAATCAAACTAAAATTAGGAGAAACTCTGCTCGACGTGTCTCCAGGTTCAAATTGTCGATGTGTTCAAGATGTTATGGCTGTGAACACTGCACAGAAACAGTGTTGCAATCTTGGCGAGATTAGCAAAAGGGTTGTTGTGGTTCCCGATCTTGATTCAATTGAACTGTAA
Predicted protein sequences of Glyma.09g230700
>Glyma.09g230700.1.p sequence-type=predicted peptide transcript=Glyma.09g230700.1 locus=Glyma.09g230700 id=Glyma.09g230700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDPDQGTSKARKPKFKPRNLKAVRAPKTEADDKRNEDSEVPRALSRRRHENPAKREPKVERKSSVEVAFSLGSSSSHSLRTYGTSKSIDSGTSSGSPSKYFANEQIRSIATEDQNDASNASARKIKREYKEPWDYENSYYPTTLPLRKPNSGDPEILDEKEFGEAATSVEYDENTVNSAAELEILESEEQRMFFFQIPTPLPMDKQSNKGKEKIGTSTVSGEATKSKNALEELPRGYMGKMLVYKSGAIKLKLGETLLDVSPGSNCRCVQDVMAVNTAQKQCCNLGEISKRVVVVPDLDSIEL*

>Glyma.09g230700.2.p sequence-type=predicted peptide transcript=Glyma.09g230700.2 locus=Glyma.09g230700 id=Glyma.09g230700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDPDQGTSKARKPKFKPRNLKAVRAPKTEADDKRNEDSEVPRALSRRRHENPAKREPKVERKSSVEVAFSLGSSSSHSLRTYGTSKSIDSGTSSGSPSKYFANEQIRSIATEDQNDASNASARKIKREYKEPWDYENSYYPTTLPLRKPNSGDPEILDEKEFGEAATSVEYDENTVNSAAELEILIPTPLPMDKQSNKGKEKIGTSTVSGEATKSKNALEELPRGYMGKMLVYKSGAIKLKLGETLLDVSPGSNCRCVQDVMAVNTAQKQCCNLGEISKRVVVVPDLDSIEL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo