Glyma.09g227600

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Report for Sequence Feature Glyma.09g227600

Feature Type:	gene_model
Chromosome:	Gm09
Start:	45197846
stop:	45201507
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.09g227600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G09680.1	AT	reduced lateral root formation	JGI	N/A	IEA
GO:0020037	GO-mf	heme binding	EnsemblGenomes	N/A	IEA
GO:0020037	GO-mf	heme binding	JGI	N/A	IEA
GO:0046872	GO-mf	metal ion binding	EnsemblGenomes	N/A	IEA
KOG0536	KOG	Flavohemoprotein b5+b5R	JGI	N/A	IEA
PTHR19370	Panther	NADH-CYTOCHROME B5 REDUCTASE	JGI	N/A	IEA
PF00173	PFAM	Cytochrome b5-like Heme/Steroid binding domain	JGI	N/A	IEA
GN7V-53503	SoyCyc9-rxn	cytochrome-b₅ reductase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.09g227600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g227600 not represented in the dataset	Glyma.09g227600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.09g227600

Paralog	Evidence	Comments
Glyma.12g009100	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.09g227600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma09g36160	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.09g227600

Limit To All Plant Sequences

>Glyma.09g227600.2 sequence-type=transcript locus=Glyma.09g227600 ID=Glyma.09g227600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GATAACATATTGAATCTCCAGCTGAACATTTTCCAAGTCAATAACACAATGAATTATGCATATATAGAGATGAAGCTAGTTTTGAATTGGTACATAGGCCCTCTTGTTTCTTTGAACAGACACACATGACTCTCTAATCTCTATCAACAATTCAATATCATCATAAATTCCGCGGACACACATTGGATAAGATAATTGATAGGGGGCTGGACTCTGAGACTTTACTTACGTGGGCTTTTGTTATAGGCCCACAGCAGCCGGCCCATCGTGTAAGGTGAAAGTCGTAATTCAACTTGCTCGGGCAGGGGGCAGAGAGTAGAAGGAAGAAGAGAGAAAGAGGGAAGCTGCTGCTGAAACGTAATCGATCTTATATCTACACTCTACCATGGACACTGATGATGATTTCACATTTTGTCAGGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCTGATATTTCCATTGAAGAAGAATCTTCAAATGCAACTAATACTACTCAGGATAGTGCTTTACCCAATCAGAAGGAGGCTACTGTTGGTTCTTTGTCTTTCACTGTAACTAGCACAGCTTCTAGTCGGCCAAGTGAATCAACCACAAAATTAGTACCAGCTCAGGCTAACAACTCGTCTCTAAAGTCACCGGCACAGAAGAATTCCGTTAAGAAGCCAACGGTTCGGGCTAAAGTTCCTTTTGAGAAAGGCTATAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAGGTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAAACACCAGACCGAGGGCCAAATGTGGACTGTATTAAAAGGCCGTGTTTATAATATATCTCCATACATGAAGTTTCACCCTGGAGGTGTTAATATGTTGATGAAGGCAGTGGGAAAAGATTGCACATCTCTATTCAATAAATACCATGCTTGGGTTAATGCTGAATTCTTATTGGAAAAATGCTTTGTGGGTACCTTAGATGAAGGTCAGTGAAGATTTCATTCTAATAATGCATAAACACATGAAGATACCCTTGGCTCCAATCCGTTATACCTCTTCATGGGCCCTCTCTATTTACTGACCAGAGGCCATCAAGCAAGGAGGAATAAATTCTGTAGGTATACACGTTTCTGTTTAAAGATCTCAATGGGAGTTTGTTCTACAATTATGGATGATTACAGTTATCTTGTAAACTAGAAATTTGGATTAACAATGTAACAATTCATGAGTGATTGTTGACTCTGTTAACTTATATGAAATCAGAGCTCAAGGGTAAGATGGTATTCTCTGTGT

Coding sequences of Glyma.09g227600

Limit To All Plant Sequences

>Glyma.09g227600.1 sequence-type=CDS polypeptide=Glyma.09g227600.1.p locus=Glyma.09g227600 ID=Glyma.09g227600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACACTGATGATGATTTCACATTTTGTCAGGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCTGATATTTCCATTGAAGAAGAATCTTCAAATGCAACTAATACTACTCAGGATAGTGCTTTACCCAATCAGAAGGAGGCTACTGTTGGTTCTTTGTCTTTCACTGTAACTAGCACAGCTTCTAGTCGGCCAAGTGAATCAACCACAAAATTAGTACCAGCTCAGGCTAACAACTCGTCTCTAAAGTCACCGGCACAGAAGAATTCCGTTAAGAAGCCAACGGTTCGGGCTAAAGTTCCTTTTGAGAAAGGCTATAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAGGTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAAACACCAGACCGAGGGCCAAATGTGGACTGTATTAAAAGGCCGTGTTTATAATATATCTCCATACATGAAGTTTCACCCTGGAGGTGTTAATATGTTGATGAAGGCAGTGGGAAAAGATTGCACATCTCTATTCAATAAATACCATGCTTGGGTTAATGCTGAATTCTTATTGGAAAAATGCTTTGTGGGTACCTTAGATGAAGGTCAGTGA

>Glyma.09g227600.2 sequence-type=CDS polypeptide=Glyma.09g227600.2.p locus=Glyma.09g227600 ID=Glyma.09g227600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACACTGATGATGATTTCACATTTTGTCAGGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATATAGCTGATATTTCCATTGAAGAAGAATCTTCAAATGCAACTAATACTACTCAGGATAGTGCTTTACCCAATCAGAAGGAGGCTACTGTTGGTTCTTTGTCTTTCACTGTAACTAGCACAGCTTCTAGTCGGCCAAGTGAATCAACCACAAAATTAGTACCAGCTCAGGCTAACAACTCGTCTCTAAAGTCACCGGCACAGAAGAATTCCGTTAAGAAGCCAACGGTTCGGGCTAAAGTTCCTTTTGAGAAAGGCTATAGTCAAATGGACTGGCTCAAGCTCACCCAAACACATCCTGACCTTGCAGGTCTGAAAGGGCAGTCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAAACACCAGACCGAGGGCCAAATGTGGACTGTATTAAAAGGCCGTGTTTATAATATATCTCCATACATGAAGTTTCACCCTGGAGGTGTTAATATGTTGATGAAGGCAGTGGGAAAAGATTGCACATCTCTATTCAATAAATACCATGCTTGGGTTAATGCTGAATTCTTATTGGAAAAATGCTTTGTGGGTACCTTAGATGAAGGTCAGTGA

Predicted protein sequences of Glyma.09g227600

Limit To All Plant Sequences

>Glyma.09g227600.1.p sequence-type=predicted peptide transcript=Glyma.09g227600.1 locus=Glyma.09g227600 ID=Glyma.09g227600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDTDDDFTFCQVSAPVDLETNKLASDIADISIEEESSNATNTTQDSALPNQKEATVGSLSFTVTSTASSRPSESTTKLVPAQANNSSLKSPAQKNSVKKPTVRAKVPFEKGYSQMDWLKLTQTHPDLAGLKGQSNKRLISMDEVRKHQTEGQMWTVLKGRVYNISPYMKFHPGGVNMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCFVGTLDEGQ*

>Glyma.09g227600.2.p sequence-type=predicted peptide transcript=Glyma.09g227600.2 locus=Glyma.09g227600 ID=Glyma.09g227600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDTDDDFTFCQVSAPVDLETNKLASDIADISIEEESSNATNTTQDSALPNQKEATVGSLSFTVTSTASSRPSESTTKLVPAQANNSSLKSPAQKNSVKKPTVRAKVPFEKGYSQMDWLKLTQTHPDLAGLKGQSNKRLISMDEVRKHQTEGQMWTVLKGRVYNISPYMKFHPGGVNMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCFVGTLDEGQ*

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