Glyma.09g226100

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Report for Sequence Feature Glyma.09g226100

Feature Type:	gene_model
Chromosome:	Gm09
Start:	45092317
stop:	45096849
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.09g226100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G43210.1	AT	Excinuclease ABC, C subunit, N-terminal	JGI	N/A	IEA
PTHR20208	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PF01541	PFAM	GIY-YIG catalytic domain	JGI	N/A	IEA

Expression Patterns of Glyma.09g226100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g226100 not represented in the dataset	Glyma.09g226100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.09g226100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma09g36020	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.09g226100

Limit To All Plant Sequences

>Glyma.09g226100.2 sequence-type=transcript locus=Glyma.09g226100 ID=Glyma.09g226100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTCTTCCAGCCGAGACAGAAAATTTGAACATATGTTCCTTTTTTGTTACAACGTTGTTGTTTCCAACGGTACAACGGTAGATGATGGGAACGCTATCTACGCAATTTCGTTCCATCAAACGCCCAAATTCAAACCCTAAACTATCCAAATCGTCATCTCCTACAAAATCAGAAATTAAATTCAACGCTAAACCAAAACCAAAATCAGAGTCAGAGTCAGAGTCATGGTCTGTTTATCTCATCCTCTCCACCAACCATCCTATCAAAACCTACGTTGGAATTACAAACAATTTCCCTCGCCGTTTGAAGCAGCATAACGGTGAACTTAAAGGTGGTGCAAAGGCATCCCGTGCTGGAAGACCTTGGATTTGTGCATGCATAATTTGTGGTTTTACAGACCGAAGTGAAGCTAGTGTATTTGAATCAAAATGGAAAACTTTCTCAAGGAGAGCTCCCCGCAAAAATCAAAATGACAATCTCTCCAAGCAAAGTGAAGATTCATCATTACCACTGCTGCGACACAGACAAGCGGCTCTGAATAGAGTGAAAGGTTCACTCGACTGCGCTCACTTAGAAATTATTTGGCATTTGGATCCATTGTGATCCAACTGCCACAATGTATGTGTTTTGATTATGTAATTGTAATAAGTTCAAATAGCAAAACATAGGCCATAAGAGAAATATTAAGAACACATTTTGTGTTATTagttaaaatttattgaaaattataaaattataagtggatttcattaagtaaaaagtgagatcCTCCAAATTTTATAATTTTTTATAATAAAGAATATTAAAAAGAGTGCGTAGCTAGCATTTTTCTATATTTGATAGTACTAGCAAATTGTACCAGACATTGATTGGTTCTTGTAGTAAGGTCTTTGTATAGTATATAAGTGACGAAAGGTTATAATTTAAAACCAGCTATTGGGTATGTGGAGCATGGACTCATGAAGGGAGAATATTGTAGTATTGTACCATATGCATTGCTTGGTTCTTGAAGTAAGGAATGAAACGTTAATGTAGCATGAAAATACTGATGCAGGGATATGACTTATTTAA

Coding sequences of Glyma.09g226100

Limit To All Plant Sequences

>Glyma.09g226100.1 sequence-type=CDS polypeptide=Glyma.09g226100.1.p locus=Glyma.09g226100 ID=Glyma.09g226100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGGGAACGCTATCTACGCAATTTCGTTCCATCAAACGCCCAAATTCAAACCCTAAACTATCCAAATCGTCATCTCCTACAAAATCAGAAATTAAATTCAACGCTAAACCAAAACCAAAATCAGAGTCAGAGTCAGAGTCATGGTCTGTTTATCTCATCCTCTCCACCAACCATCCTATCAAAACCTACGTTGGAATTACAAACAATTTCCCTCGCCGTTGGTGTAGTTTGAAGCAGCATAACGGTGAACTTAAAGGTGGTGCAAAGGCATCCCGTGCTGGAAGACCTTGGATTTGTGCATGCATAATTTGTGGTTTTACAGACCGAAGTGAAGCTAGTGTATTTGAATCAAAATGGAAAACTTTCTCAAGGAGAGCTCCCCGCAAAAATCAAAATGACAATCTCTCCAAGCAAAGTGAAGATTCATCATTACCACTGCTGCGACACAGACAAGCGGCTCTGAATAGAGTGAAAGGTTCACTCGACTGCGCTCACTTAGAAATTATTTGGCATTTGGATCCATTGTGA

>Glyma.09g226100.2 sequence-type=CDS polypeptide=Glyma.09g226100.2.p locus=Glyma.09g226100 ID=Glyma.09g226100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGGGAACGCTATCTACGCAATTTCGTTCCATCAAACGCCCAAATTCAAACCCTAAACTATCCAAATCGTCATCTCCTACAAAATCAGAAATTAAATTCAACGCTAAACCAAAACCAAAATCAGAGTCAGAGTCAGAGTCATGGTCTGTTTATCTCATCCTCTCCACCAACCATCCTATCAAAACCTACGTTGGAATTACAAACAATTTCCCTCGCCGTTTGAAGCAGCATAACGGTGAACTTAAAGGTGGTGCAAAGGCATCCCGTGCTGGAAGACCTTGGATTTGTGCATGCATAATTTGTGGTTTTACAGACCGAAGTGAAGCTAGTGTATTTGAATCAAAATGGAAAACTTTCTCAAGGAGAGCTCCCCGCAAAAATCAAAATGACAATCTCTCCAAGCAAAGTGAAGATTCATCATTACCACTGCTGCGACACAGACAAGCGGCTCTGAATAGAGTGAAAGGTTCACTCGACTGCGCTCACTTAGAAATTATTTGGCATTTGGATCCATTGTGA

Predicted protein sequences of Glyma.09g226100

Limit To All Plant Sequences

>Glyma.09g226100.1.p sequence-type=predicted peptide transcript=Glyma.09g226100.1 locus=Glyma.09g226100 ID=Glyma.09g226100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMGTLSTQFRSIKRPNSNPKLSKSSSPTKSEIKFNAKPKPKSESESESWSVYLILSTNHPIKTYVGITNNFPRRWCSLKQHNGELKGGAKASRAGRPWICACIICGFTDRSEASVFESKWKTFSRRAPRKNQNDNLSKQSEDSSLPLLRHRQAALNRVKGSLDCAHLEIIWHLDPL*

>Glyma.09g226100.2.p sequence-type=predicted peptide transcript=Glyma.09g226100.2 locus=Glyma.09g226100 ID=Glyma.09g226100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMGTLSTQFRSIKRPNSNPKLSKSSSPTKSEIKFNAKPKPKSESESESWSVYLILSTNHPIKTYVGITNNFPRRLKQHNGELKGGAKASRAGRPWICACIICGFTDRSEASVFESKWKTFSRRAPRKNQNDNLSKQSEDSSLPLLRHRQAALNRVKGSLDCAHLEIIWHLDPL*

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