Glyma.09g223900

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Report for Sequence Feature Glyma.09g223900

Feature Type:	gene_model
Chromosome:	Gm09
Start:	44887793
stop:	44891771
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.09g223900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G10110.1	AT	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	JGI	N/A	IEA
GO:0033365	GO-bp	protein localization to organelle	EnsemblGenomes	N/A	IEA
GO:0045039	GO-bp	protein import into mitochondrial inner membrane	EnsemblGenomes	N/A	IEA
GO:0071806	GO-bp	protein transmembrane transport	EnsemblGenomes	N/A	IEA
GO:0016020	GO-cc	membrane	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	EnsemblGenomes	N/A	IEA
GO:0042721	GO-cc	mitochondrial inner membrane protein insertion complex	EnsemblGenomes	N/A	IEA
KOG3225	KOG	Mitochondrial import inner membrane translocase, subunit TIM22	JGI	N/A	IEA
PTHR14110	Panther	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	JGI	N/A	IEA
PF02466	PFAM	Tim17/Tim22/Tim23/Pmp24 family	JGI	N/A	IEA

Expression Patterns of Glyma.09g223900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g223900 not represented in the dataset	Glyma.09g223900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.09g223900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma09g35780	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.09g223900

Limit To All Plant Sequences

>Glyma.09g223900.2 sequence-type=transcript locus=Glyma.09g223900 ID=Glyma.09g223900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CGTAAGATAAAGTCATAAATGTGAAAATGAAAAGAAAAATGTGAATTGAGTGGAGTACCCTAGTGTCCCCGATTATATTCTACTTCCAGACACCCCCTGTGCCGCCTTCCCACCTCTCACGCCGAACCTCTACCGTTCTTCAATCTCGTCTTACTCACCTTCAACGAGCATCAAGCATTAGCTCTGCTTTACCAATGGCTGATGACTCTGCTAAAGGAATTGAAAATGCTTCTTTGAACTCAACACGACTAGAGAACCCTCAGATTGAGCCCATAAGACTGCCCTCGGTAGAGGAAATCCGTGGTCAAGACATTTGGAACAATTGTGCAGTGCGCAGTGTTGTCAGTGGAGTCATGGGTGGCGGGCTTGGCATCTTCATGGGTTTATTTCTTGGAGCACTGGACAACCCATTGATGCAGGAGGAAATGACCGGCAGACAACAGCTTATATATCAAGCAAAACAGATGGGGCGAAGGAGTTGGAGTTCAGCCAAAGCATTTGCTGTTATGGGTTTCATATTCTCAGCTGCCGAGTGTGTTGTTGAGAAGGCTCGAGCAAAACATGACATAACAAATACCGTTGTTGCTGGATGTGCAACTGGAGGTGCAATATCAGCAAAAGGTGTTAAAGCTTTGATGGAGTACCCTAACTTAAAAAGCATACCAACCCACTGAAAGAATAGTTCCCTACAGGAGTGCTGCTTCCCTATAGAGGAGTGCGGTACAGGGAGCATGGCTAAGTGCACATGAGAGAGGTTATTTTTGTTCTTCCGGGTGCCATAACAACAATAATCTTGGTATATTTTACTCCAAAACACAAGGTGGCCCAAAAGCAGCGTGTGCTGGTTGTGCTGGCTTTGCGGCATTCTCAGTCGTAATAGAGAAGTTTTTGGAGAGACATCAATAAGGGAATTGACGTTAGCCTAACACATTTTGAGTTCTTGGTTAAGTCTTTTGCCCATTTGATGCGGGACGTGATTGGGGGAGCACACATATTGCAGTATTTATTTTACATCAATACGATGTCATTTGCAAATGCATTTCTAATCTGGAGAAAGGTGATGTAATGATTTGATTTAGTATTAAATAATTAAAATGGTTGTTTTCTTTGTGCATTCGTATGTCTGAATAATTCTATGGTATATTCATTATTCACCGCTGTCATTATCTGTTTAGGTGAAAAAATATAATTTGGCTGTTAGGTATAAATTGAATGTGGTTATG

>Glyma.09g223900.3 sequence-type=transcript locus=Glyma.09g223900 ID=Glyma.09g223900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CGTAAGATAAAGTCATAAATGTGAAAATGAAAAGAAAAATGTGAATTGAGTGGAGTACCCTAGTGTCCCCGATTATATTCTACTTCCAGACACCCCCTGTGCCGCCTTCCCACCTCTCACGCCGAACCTCTACCGTTCTTCAATCTCGTCTTACTCACCTTCAACGAGCATCAAGCATTAGCTCTGCTTTACCAATGGCTGATGACTCTGCTAAAGGAATTGAAAATGCTTCTTTGAACTCAACACGACTAGAGAACCCTCAGATTGAGCCCATAAGACTGCCCTCGGTAGAGGAAATCCGTGGTCAAGACATTTGGAACAATTGTGCAGTGCGCAGTGTTGTCAGTGGAGTCATGGGTGGCGGGCTTGGCATCTTCATGGGTTTATTTCTTGGAGCACTGGACAACCCATTGATGCAGGAGGAAATGACCGGCAGACAACAGCTTATATATCAAGCAAAACAGATGGGGCGAAGGAGTTGGAGTTCAGCCAAAGCATTTGCTGTTATGGGTTTCATATTCTCAGCTGCCGAGTGTGTTGTTGAGAAGGCTCGAGCAAAACATGACATAACAAATACCGTTGTTGCTGGATGTGCAACTGGAGGTGCAATATCAGCAAAAGGTGTTAAAGCTTTGATGGAGTACCCTAACTTAAAAAGCATACCAACCCACTGAAAGAATAGTTCCCTACAGGAGTGCTGCTTCCCTATAGAGGAGTGCGGTACAGGGAGCATGGCTAAGTGCACATGAGAGAGGTTATTTTTGTTCTTCCGGGTGCCATAACAACAATAATCTTGGTATATTTTACTCCAAAACACAAGGTTGTTTTTAAAATTATTCTGTTATTCCTTTTCAAAGTAGTTTTATATTTAAATGTTCTTTGTGCTGTAGATAAAAACTGAAAATCAGAGAATAAAGTTGAGTAAGCACCAGTTTTCATGGGGTTTTTGATAGTAGTACCTTGGGCGGGACatgaaaaaaaaaatgatacatgggaagaggttgaggaggtataatagaatgataatgaattgaaatCCACAATGTTACTCCTTTTTATGAATCTTTCTCTGCCTTTGTTTTTTCTCCATGATGTCCATCGATGTTTCCCCTGTTGTCACATGGTTCTAGGTGGCCCAAAAGCAGCGTGTGCTGGTTGTGCTGGCTTTGCGGCATTCTCAGTCGTAATAGAGAAGTTTTTGGAGAGACATCAATAAGGGAATTGACGTTAGCCTAACACATTTTGAGTTCTTGGTTAAGTCTTTTGCCCATTTGATGCGGGACGTGATTGGGGGAGCACACATATTGCAGTATTTATTTTACATCAATACGATGTCATTTGCAAATGCATTTCTAATCTGGAGAAAGGTGATGTAATGATTTGATTTAGTATTAAATAATTAAAATGGTTGTTTTCTTTGTGCATTCGTATGTCTGAATAATTCTATGGTATATTCATTATTCACCGCTGTCATTATCTGTTTAGGTGAAAAAATATAATTTGGCTGTTAGGTATAAATTGAATGTGGTTATG

Coding sequences of Glyma.09g223900

Limit To All Plant Sequences

>Glyma.09g223900.1 sequence-type=CDS polypeptide=Glyma.09g223900.1.p locus=Glyma.09g223900 ID=Glyma.09g223900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGATGACTCTGCTAAAGGAATTGAAAATGCTTCTTTGAACTCAACACGACTAGAGAACCCTCAGATTGAGCCCATAAGACTGCCCTCGGTAGAGGAAATCCGTGGTCAAGACATTTGGAACAATTGTGCAGTGCGCAGTGTTGTCAGTGGAGTCATGGGTGGCGGGCTTGGCATCTTCATGGGTTTATTTCTTGGAGCACTGGACAACCCATTGATGCAGGAGGAAATGACCGGCAGACAACAGCTTATATATCAAGCAAAACAGATGGGGCGAAGGAGTTGGAGTTCAGCCAAAGCATTTGCTGTTATGGGTTTCATATTCTCAGCTGCCGAGTGTGTTGTTGAGAAGGCTCGAGCAAAACATGACATAACAAATACCGTTGTTGCTGGATGTGCAACTGGAGGTGCAATATCAGCAAAAGGTGGCCCAAAAGCAGCGTGTGCTGGTTGTGCTGGCTTTGCGGCATTCTCAGTCGTAATAGAGAAGTTTTTGGAGAGACATCAATAA

>Glyma.09g223900.2 sequence-type=CDS polypeptide=Glyma.09g223900.2.p locus=Glyma.09g223900 ID=Glyma.09g223900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGATGACTCTGCTAAAGGAATTGAAAATGCTTCTTTGAACTCAACACGACTAGAGAACCCTCAGATTGAGCCCATAAGACTGCCCTCGGTAGAGGAAATCCGTGGTCAAGACATTTGGAACAATTGTGCAGTGCGCAGTGTTGTCAGTGGAGTCATGGGTGGCGGGCTTGGCATCTTCATGGGTTTATTTCTTGGAGCACTGGACAACCCATTGATGCAGGAGGAAATGACCGGCAGACAACAGCTTATATATCAAGCAAAACAGATGGGGCGAAGGAGTTGGAGTTCAGCCAAAGCATTTGCTGTTATGGGTTTCATATTCTCAGCTGCCGAGTGTGTTGTTGAGAAGGCTCGAGCAAAACATGACATAACAAATACCGTTGTTGCTGGATGTGCAACTGGAGGTGCAATATCAGCAAAAGGTGTTAAAGCTTTGATGGAGTACCCTAACTTAAAAAGCATACCAACCCACTGA

>Glyma.09g223900.3 sequence-type=CDS polypeptide=Glyma.09g223900.3.p locus=Glyma.09g223900 ID=Glyma.09g223900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGATGACTCTGCTAAAGGAATTGAAAATGCTTCTTTGAACTCAACACGACTAGAGAACCCTCAGATTGAGCCCATAAGACTGCCCTCGGTAGAGGAAATCCGTGGTCAAGACATTTGGAACAATTGTGCAGTGCGCAGTGTTGTCAGTGGAGTCATGGGTGGCGGGCTTGGCATCTTCATGGGTTTATTTCTTGGAGCACTGGACAACCCATTGATGCAGGAGGAAATGACCGGCAGACAACAGCTTATATATCAAGCAAAACAGATGGGGCGAAGGAGTTGGAGTTCAGCCAAAGCATTTGCTGTTATGGGTTTCATATTCTCAGCTGCCGAGTGTGTTGTTGAGAAGGCTCGAGCAAAACATGACATAACAAATACCGTTGTTGCTGGATGTGCAACTGGAGGTGCAATATCAGCAAAAGGTGTTAAAGCTTTGATGGAGTACCCTAACTTAAAAAGCATACCAACCCACTGA

Predicted protein sequences of Glyma.09g223900

Limit To All Plant Sequences

>Glyma.09g223900.1.p sequence-type=predicted peptide transcript=Glyma.09g223900.1 locus=Glyma.09g223900 ID=Glyma.09g223900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MADDSAKGIENASLNSTRLENPQIEPIRLPSVEEIRGQDIWNNCAVRSVVSGVMGGGLGIFMGLFLGALDNPLMQEEMTGRQQLIYQAKQMGRRSWSSAKAFAVMGFIFSAAECVVEKARAKHDITNTVVAGCATGGAISAKGGPKAACAGCAGFAAFSVVIEKFLERHQ*

>Glyma.09g223900.2.p sequence-type=predicted peptide transcript=Glyma.09g223900.2 locus=Glyma.09g223900 ID=Glyma.09g223900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MADDSAKGIENASLNSTRLENPQIEPIRLPSVEEIRGQDIWNNCAVRSVVSGVMGGGLGIFMGLFLGALDNPLMQEEMTGRQQLIYQAKQMGRRSWSSAKAFAVMGFIFSAAECVVEKARAKHDITNTVVAGCATGGAISAKGVKALMEYPNLKSIPTH*

>Glyma.09g223900.3.p sequence-type=predicted peptide transcript=Glyma.09g223900.3 locus=Glyma.09g223900 ID=Glyma.09g223900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MADDSAKGIENASLNSTRLENPQIEPIRLPSVEEIRGQDIWNNCAVRSVVSGVMGGGLGIFMGLFLGALDNPLMQEEMTGRQQLIYQAKQMGRRSWSSAKAFAVMGFIFSAAECVVEKARAKHDITNTVVAGCATGGAISAKGVKALMEYPNLKSIPTH*

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