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Report for Sequence Feature Glyma.09g223600

Feature Type:gene_model
Chromosome:Gm09
Start:45254582
stop:45259726
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.09g223600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G64860.1AT RPOD1,SIG1,SIG2,SIGA,SIGB JGI N/AIEA
GO:0006352GO-bp DNA-templated transcription, initiation JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
GO:0016987GO-mf sigma factor activity JGI N/AIEA
K03086KEGG Transcription machinery JGI N/AIEA
PTHR30603PantherFam RNA POLYMERASE SIGMA FACTOR RPO JGI N/AIEA
PTHR30603:SF14PantherFam RNA POLYMERASE SIGMA FACTOR SIGA JGI N/AIEA
PF04539Pfam Sigma-70 region 3 JGI N/AIEA
PF04542Pfam Sigma-70 region 2 JGI N/AIEA
PF04545Pfam Sigma-70, region 4 JGI N/AIEA

Gene model name correspondences to Glyma.09g223600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g35750 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g223600
>Glyma.09g223600.1 sequence-type=CDS polypeptide=Glyma.09g223600.1.p locus=Glyma.09g223600 id=Glyma.09g223600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTACTGCTGCAGTAATTGGACTCAGTGGAGGAAAGAGGCTCTTGAGTTCATCATACCATTACTCTGATGTTATAGAAAAGCTATCTTATGGCAGTGATTTTGGATCCACACACTATCAAATTGTTCCTACAAAGTCTTTAATAGCTGCCAAGAAGTCATCCAACTACACTCCAACTTTTCCAGCATCGAACCAGCAGAATCAGTCCATTAAGGCTCTTAAGGAGCATGTTGATGATGCCCCTACCATTGCGGATTCATGGTTTCAGAGTTGCAACTCTAACGACTTAGAGGTGGAAAGCTCTGAAATGGGTTATTCTGTGGAGGCTCTTCTTTTGCTGCAGAAGTCAATGCTGGAAAAGCAATGGAACCTTTCTTTTGAAAGGGAAGTGCTAACCGAACATTCTAGTAAGGGAAAAAAATGTAAGAAAGTGGCGGTGACTTGTTCTGGGGTGTCTGCAAGGCAAAGAAGAATGAATACCAAGAGGAAGACTGCGATTAAAACTTGTGGTGCTATGCAGCTGAAGTCCAAAATCAGTCCAGAGCTGCTTCAACACCGTTTGAAGGGCTATGTGAAAGGCATAGTGAGTGAGGAATTGCTCTCTCATGCAGAAGTTGTAAACCTATCAGAGAGAATAAAAGTTGGGCTTTCCTTAGAGGAGCATAAATCCAGACTTAAGGAAAGACTAGGATGTGAACCCTCTGATGATCAAATGGCAATTTCATTGAAGATTTCTCGAACTGAACTACGAGCAAGAATGATAGAGTGCACTCTGGCAAGAGAAAAGTTGGCTATGAGCAATGTTCGCTTAGTTATGTCTATTGCTCAAAAATATGATAACCTGGGTGCAGAAATGGGCGATCTTGTTCAGGGTGGCTTGATTGGACTACTGCGTGGTATTGAAAAGTTTGATTCTTCAAAAGGGTTTAAGATTTCAACTTATGTTTATTGGTGGATACGTCAGGGAGTTTCAAGAGCTTTAGTTGAGAACTCAAGAACATTAAGATTGCCTGCTCATTTGCATGAGAGGCTATCTCTAATCCGCAATGCAAAGTTTAGACTAGAAGAGAGAGGCATTACTCCAACTATTGATAGGATTGCAAAATACCTTAACATGTCTCAAAAGAAAGTCAGAAATGCTACTGAGGCAATCAGCAAAACTATCTCGCTTGATAGAGAAGCATTCCCCTCTCTGAATGGTATACAAGGAGAAACTCATCATAGTTATATTGCGGATGATCGAGTGGAGAACATCCCATGGAATGGAGTAGACGAGTGGGCACTAAAGGACGAAGTGAACAAACTCATTAATGTGACCCTTGTGGAACGAGAGAGAGAAATTATTCGACTTTATTATGGATTGGATAAAGAAGGTCTTACATGGGAAGACATTAGTAAACGGATAGGTTTGTCAAGAGAAAGAGTAAGGCAAGTTGGACTTGTTGCATTGGAGAAACTAAAACATGCTGCGAGGAAGAGACAAATGGAAGCCATGCTATTGAAACATTAA

>Glyma.09g223600.2 sequence-type=CDS polypeptide=Glyma.09g223600.2.p locus=Glyma.09g223600 id=Glyma.09g223600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTACTGCTGCAGTAATTGGACTCAGTGGAGGAAAGAGGCTCTTGAGTTCATCATACCATTACTCTGATGTTATAGAAAAGCTATCTTATGGCAGTGATTTTGGATCCACACACTATCAAATTGTTCCTACAAAGTCTTTAATAGCTGCCAAGAAGTCATCCAACTACACTCCAACTTTTCCAGCATCGAACCAGCAGAATCAGTCCATTAAGGCTCTTAAGGAGCATGTTGATGATGCCCCTACCATTGCGGATTCATGGTTTCAGAGTTGCAACTCTAACGACTTAGAGGTGGAAAGCTCTGAAATGGGTTATTCTGTGGAGGCTCTTCTTTTGCTGCAGAAGTCAATGCTGGAAAAGCAATGGAACCTTTCTTTTGAAAGGGAAGTGCTAACCGAACATTCTAGTAAGGGAAAAAAATGTAAGAAAGTGGCGGTGACTTGTTCTGGGGTGTCTGCAAGGCAAAGAAGAATGAATACCAAGAGGAAGACTGCGATTAAAACTTGTGGTGCTATGCAGCTGAAGTCCAAAATCAGTCCAGAGCTGCTTCAACACCGTTTGAAGGGCTATGTGAAAGGCATAGTGAGTGAGGAATTGCTCTCTCATGCAGAAGTTGTAAACCTATCAGAGAGAATAAAAGTTGGGCTTTCCTTAGAGGAGCATAAATCCAGACTTAAGGAAAGACTAGGATGTGAACCCTCTGATGATCAAATGGCAATTTCATTGAAGATTTCTCGAACTGAACTACGAGCAAGAATGATAGAGTGCACTCTGGCAAGAGAAAAGTTGGCTATGAGCAATGTTCGCTTAGTTATGTCTATTGCTCAAAAATATGATAACCTGGGTGCAGAAATGGGCGATCTTGTTCAGGGTGGCTTGATTGGACTACTGCGTGGTATTGAAAAGTTTGATTCTTCAAAAGGGTTTAAGATTTCAACTTATGTTTATTGGTGGATACGTCAGGGAGTTTCAAGAGCTTTAGTTGAGAACTCAAGAACATTAAGATTGCCTGCTCATTTGCATGAGAGGCTATCTCTAATCCGCAATGCAAAGTTTAGACTAGAAGAGAGAGGCATTACTCCAACTATTGATAGGATTGCAAAATACCTTAACATGTCTCAAAAGAAAGTCAGAAATGCTACTGAGGCAATCAGCAAAACTATCTCGCTTGATAGAGAAGCATTCCCCTCTCTGAATGGTATACAAGGAGAAACTCATCATAGTTATATTGCGGATGATCGAGTGGAGAACATCCCATGGAATGGAGTAGACGAGTGGGCACTAAAGGACGAAGTGAACAAACTCATTAATGTGACCCTTGTGGAACGAGAGAGAGAAATTATTCGACTTTATTATGGATTGGATAAAGAAGGTCTTACATGGGAAGACATTAGTAAACGGTGA

>Glyma.09g223600.3 sequence-type=CDS polypeptide=Glyma.09g223600.3.p locus=Glyma.09g223600 id=Glyma.09g223600.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTACTGCTGCAGTAATTGGACTCAGTGGAGGAAAGAGGCTCTTGAGTTCATCATACCATTACTCTGATGTTATAGAAAAGCTATCTTATGGCAGTGATTTTGGATCCACACACTATCAAATTGTTCCTACAAAGTCTTTAATAGCTGCCAAGAAGTCATCCAACTACACTCCAACTTTTCCAGCATCGAACCAGCAGAATCAGTCCATTAAGGCTCTTAAGGAGCATGTTGATGATGCCCCTACCATTGCGGATTCATGGTTTCAGAGTTGCAACTCTAACGACTTAGAGGTGGAAAGCTCTGAAATGGGTTATTCTGTGGAGGCTCTTCTTTTGCTGCAGAAGTCAATGCTGGAAAAGCAATGGAACCTTTCTTTTGAAAGGGAAGTGCTAACCGAACATTCTAGTAAGGGAAAAAAATGTAAGAAAGTGGCGGTGACTTGTTCTGGGGTGTCTGCAAGGCAAAGAAGAATGAATACCAAGAGGAAGACTGCGATTAAAACTTGTGGTGCTATGCAGCTGAAGTCCAAAATCAGTCCAGAGCTGCTTCAACACCGTTTGAAGGGCTATGTGAAAGGCATAGTGAGTGAGGAATTGCTCTCTCATGCAGAAGTTGTAAACCTATCAGAGAGAATAAAAGTTGGGCTTTCCTTAGAGGAGCATAAATCCAGACTTAAGGAAAGACTAGGATGTGAACCCTCTGATGATCAAATGGCAATTTCATTGAAGATTTCTCGAACTGAACTACGAGCAAGAATGATAGAGTGCACTCTGGCAAGAGAAAAGTTGGCTATGAGCAATGTTCGCTTAGTTATGTCTATTGCTCAAAAATATGATAACCTGGGTGCAGAAATGGGCGATCTTGTTCAGGGTGGCTTGATTGGACTACTGCGTGGTATTGAAAAGTTTGATTCTTCAAAAGGGTTTAAGATTTCAACTTATGTTTATTGGTGGATACGTCAGGGAGTTTCAAGAGCTTTAGTTGAGAACTCAAGAACATTAAGATTGCCTGCTCATTTGCATGAGAGGCTATCTCTAATCCGCAATGCAAAGTTTAGACTAGAAGAGAGAGGCATTACTCCAACTATTGATAGGATTGCAAAATACCTTAACATGTCTCAAAAGAAAGTCAGAAATGCTACTGAGGCAATCAGCAAAACTATCTCGCTTGATAGAGAAGCATTCCCCTCTCTGAATGGTATACAAGGAGAAACTCATCATAGTTATATTGCGGATGATCGAGTGGAGAACATCCCATGGAATGGAGTAGACGAGTGGGCACTAAAGGACGAAGTGAACAAACTCATTAATGTGACCCTTGTGGAACGAGAGAGAGAAATTATTCGACTTTATTATGGATTGGATAAAGAAGGTCTTACATGGGAAGACATTAGTAAACGGATAGGTTTGTCAAGAGAAAGAGTAAGGCAAGTTGGACTTGTTGCATTGGAGAAACTAAAACATGCTGCGAGGAAGAGACAAATGGAAGCCATGCTATTGAAACATTAA
Predicted protein sequences of Glyma.09g223600
>Glyma.09g223600.1.p sequence-type=predicted peptide transcript=Glyma.09g223600.1 locus=Glyma.09g223600 id=Glyma.09g223600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATAAVIGLSGGKRLLSSSYHYSDVIEKLSYGSDFGSTHYQIVPTKSLIAAKKSSNYTPTFPASNQQNQSIKALKEHVDDAPTIADSWFQSCNSNDLEVESSEMGYSVEALLLLQKSMLEKQWNLSFEREVLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKRKTAIKTCGAMQLKSKISPELLQHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHKSRLKERLGCEPSDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKTISLDREAFPSLNGIQGETHHSYIADDRVENIPWNGVDEWALKDEVNKLINVTLVEREREIIRLYYGLDKEGLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRQMEAMLLKH*

>Glyma.09g223600.2.p sequence-type=predicted peptide transcript=Glyma.09g223600.2 locus=Glyma.09g223600 id=Glyma.09g223600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATAAVIGLSGGKRLLSSSYHYSDVIEKLSYGSDFGSTHYQIVPTKSLIAAKKSSNYTPTFPASNQQNQSIKALKEHVDDAPTIADSWFQSCNSNDLEVESSEMGYSVEALLLLQKSMLEKQWNLSFEREVLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKRKTAIKTCGAMQLKSKISPELLQHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHKSRLKERLGCEPSDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKTISLDREAFPSLNGIQGETHHSYIADDRVENIPWNGVDEWALKDEVNKLINVTLVEREREIIRLYYGLDKEGLTWEDISKR*

>Glyma.09g223600.3.p sequence-type=predicted peptide transcript=Glyma.09g223600.3 locus=Glyma.09g223600 id=Glyma.09g223600.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATAAVIGLSGGKRLLSSSYHYSDVIEKLSYGSDFGSTHYQIVPTKSLIAAKKSSNYTPTFPASNQQNQSIKALKEHVDDAPTIADSWFQSCNSNDLEVESSEMGYSVEALLLLQKSMLEKQWNLSFEREVLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKRKTAIKTCGAMQLKSKISPELLQHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHKSRLKERLGCEPSDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKFRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKTISLDREAFPSLNGIQGETHHSYIADDRVENIPWNGVDEWALKDEVNKLINVTLVEREREIIRLYYGLDKEGLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRQMEAMLLKH*






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