Glyma.09g202900

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Report for Sequence Feature Glyma.09g202900

Feature Type:	gene_model
Chromosome:	Gm09
Start:	42685911
stop:	42690981
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.09g202900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G10560.1	AT	Glycosyl hydrolase family protein	JGI	N/A	IEA
GO:0005975	GO-bp	carbohydrate metabolic process	EnsemblGenomes	N/A	IEA
GO:0005975	GO-bp	carbohydrate metabolic process	JGI	N/A	IEA
GO:0005773	GO-cc	vacuole	EnsemblGenomes	N/A	IEA
GO:0005774	GO-cc	vacuolar membrane	EnsemblGenomes	N/A	IEA
GO:0004553	GO-mf	hydrolase activity, hydrolyzing O-glycosyl compounds	EnsemblGenomes	N/A	IEA
GO:0004553	GO-mf	hydrolase activity, hydrolyzing O-glycosyl compounds	JGI	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	EnsemblGenomes	N/A	IEA
PF00933	PFAM	Glycosyl hydrolase family 3 N terminal domain	JGI	N/A	IEA
PF01915	PFAM	Glycosyl hydrolase family 3 C-terminal domain	JGI	N/A	IEA
GN7V-49543	SoyCyc9-rxn	xylan 1,4-β-xylosidase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.09g202900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g202900 not represented in the dataset	Glyma.09g202900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.09g202900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma09g33580	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.09g202900

Limit To All Plant Sequences

>Glyma.09g202900.2 sequence-type=transcript locus=Glyma.09g202900 ID=Glyma.09g202900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGTGGTTGAGGTGTGTGATCCGTAACAGTGAGAAGAAGAAAGGGTGAGATGTCAAAGCAATGGCAATGGAGTTCCGCTTGGACGTTGCTTCTCTTTCTCATCTTCTTCCTCTCCTCAACAACAACAAGCACCACTGACTACGCTTGCAAATTCTCCCAGTCCCACCCCTTCTGCGACACTTCCCTCCCCACTCTCACACGTGCGCGCTCCCTCGTGTCCCTCCTCACTCTCCCTGAGAAGAtcctcctcctctccaacaacgcctcctccatcccccgcctcggcatccccgcctACCAGTGGTGGTCCGAGTCCCTCCACGGCCTCGCCCTCAACGGCCCCGGCGTCTCCTTCGCCGGCGCCGTCCCCTCCGCCACCAGCTTCCCCCAGGTCATCCTCTCCGCCGCCTCCTTCAACCGCTCCCTCTGGCTCCGCACCGCCGCCGCCATCGCCCGCGAGGCCCGCGCCATGTTTAACGTGGGCCAGGCCGGGCTCACCTTCTGGGCCCCCAACATCAACCTCTTCAGGGACCCTAGGTGGGGCCGCGGCCAGGAGACCCCCGGCGAGGACCCCATGCTCGCTTCTGCTTATGCTGTTGAGTATGTTAGAGGCCTTCAGGGACTCAGCGGAATCCAAGATGCTGTCGTTGTTGATGATGATGATACGCTTATGGTGTCTGCGTGTTGCAAACATTTCACTGCTTATGATTTGGACATGTGGGGACAGTTCTCCAGGTATAACTTCAATGCTGTGGTATCACAACAGGATTTGGAAGACACTTATCAGCCCCCATTTCGTAGTTGTATTCAGCAAGGGAAAGCAAGCTGCTTGATGTGTTCCTACAATGAGGTGAATGGTGTTCCTGCTTGTGCTAGCGAGGAACTCCTGGGACTGGCTAGAGACAAGTGGGGGTTTAAAGGGTACATCACCTCAGATTGTGATGCTGTGGCCACGGTTTATGAGTATCAGAAATACGCAAAATCCCAGGAGGATGCTGTTGCTGACGTTCTCAAAGCAGGTATGGATATTAATTGCGGGACGTTTATGCTTCGACATACTGAATCTGCTATTGAGCAAGGAAAGGTTAAAGAGGAAGATTTAGATCGAGCACTTCTTAACCTTTTCTCTGTTCAACTGCGCCTTGGACTGTTTGATGGAGACCCTATAAGAGGTCGGTTTGGCAAATTGGGACCAAAGGATGTTTGCACCCAAGAACACAAAACACTGGCACTTGATGCTGCAAGGCAGGGGATTGTACTGCTGAAGAATGACAAGAAGTTCCTTCCCTTGGATAGGGATATTGGTGCCTCCTTAGCTGTCATTGGTCCATTGGCAACTACAACCAAATTAGGTGGTGGCTACTCAGGAATTCCTTGCTCCTCATCAAGCTTATATGAAGGACTTGGAGAGTTTGCAGAGAGGATATCATACGCTTTTGGTTGCTATGATGTACCATGTGATTCTGATGACGGTTTTGCTGAGGCCATTGACACTGCAAAGCAAGCTGATTTTGTTGTTATAGTTGCTGGGCTTGATGCAACGCAAGAGACAGAGGATCATGACCGAGTTAGTCTTCTCTTGCCTGGTAAACAAATGAACCTTGTATCATCTGTAGCTGATGCTAGTAAAAATCCAGTTATTCTTGTTCTTATTGGTGGAGGACCTCTTGATGTCTCTTTTGCTGAAAAAAATCCACAAATCGCAAGTATTATTTGGTTGGGATACCCTGGTGAAGCTGGTGGAAAAGCTCTAGCTGAAATTATCTTTGGAGAGTTTAATCCAGCCGGAAGACTGCCAATGACTTGGTACCCTGAGGCATTTACTAATGTTCCCATGAATGAGATGAGCATGCGAGCTGATCCTTCACGTGGTTATCCAGGAAGGACCTACCGGTTTTATACTGGAGATGGTTCTAGAAAGAGATTATTATATCAGGTAGAGAATGAGGTTTATGGAGTTGATTATGTTCCAGTTAATCAGTTGCAAAATTGCAACAAATTGAGCTTCTCAGTGCATATTTCTGTGATGAACCTTGGTGGTTTGGATGGAAGCCATGTTGTAATGTTGTTCTCTAAAGGGCCAAAAGTTGTAGATGGTTCTCCAGAAACCCAATTGGTTGGGTTCAGCCGTCTGCATACTATTTCTAGCAAACCAACTGAAACAAGCATTTTGGTGCATCCTTGTGAACACTTGAGCTTTGCAGACAAGCAAGGAAAAAGGATTTTGCCCTTGGGCCCCCACACTTTGAGTGTAGGGGACTTAGAGCACGTTGTTTCAATTGAAATTTATTGATTGCTTGTAAAATGTCAAATGTGTAATTTATCGAAGGGTTGGCAATTTATTAAAAAATTTAAATGAGGATGATATCAAATGATGTATATGTTTGTGACTGTCACAGCGTTATTGAGAACCAAAGTCTTTTTTTAGTCATGAATTTGTCTATTACAGTTTTCTTTTTTAGTCATGAGTTGGGCATTGGAGCTCTAGCTCGCAGGCTGCCAGTATAACTCACAACCCACACGGGCTACGAGCATCAATATTAACAACCCATTTAAGAAGTGTGCTTTTTAGCCTGACACGTTTAACCTGTAGGTTAAATGTTGCTTGCGATTTTTTAATGAGTTAACTTTTTTTTTT

Coding sequences of Glyma.09g202900

Limit To All Plant Sequences

>Glyma.09g202900.1 sequence-type=CDS polypeptide=Glyma.09g202900.1.p locus=Glyma.09g202900 ID=Glyma.09g202900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCAAAGCAATGGCAATGGAGTTCCGCTTGGACGTTGCTTCTCTTTCTCATCTTCTTCCTCTCCTCAACAACAACAAGCACCACTGACTACGCTTGCAAATTCTCCCAGTCCCACCCCTTCTGCGACACTTCCCTCCCCACTCTCACACGTGCGCGCTCCCTCGTGTCCCTCCTCACTCTCCCTGAGAAGATCCTCCTCCTCTCCAACAACGCCTCCTCCATCCCCCGCCTCGGCATCCCCGCCTACCAGTGGTGGTCCGAGTCCCTCCACGGCCTCGCCCTCAACGGCCCCGGCGTCTCCTTCGCCGGCGCCGTCCCCTCCGCCACCAGCTTCCCCCAGGTCATCCTCTCCGCCGCCTCCTTCAACCGCTCCCTCTGGCTCCGCACCGCCGCCGCCATCGCCCGCGAGGCCCGCGCCATGTTTAACGTGGGCCAGGCCGGGCTCACCTTCTGGGCCCCCAACATCAACCTCTTCAGGGACCCTAGGTGGGGCCGCGGCCAGGAGACCCCCGGCGAGGACCCCATGCTCGCTTCTGCTTATGCTGTTGAGTATGTTAGAGGCCTTCAGGGACTCAGCGGAATCCAAGATGCTGTCGTTGTTGATGATGATGATACGCTTATGGTGTCTGCGTGTTGCAAACATTTCACTGCTTATGATTTGGACATGTGGGGACAGTTCTCCAGGTATAACTTCAATGCTGTGGTATCACAACAGGATTTGGAAGACACTTATCAGCCCCCATTTCGTAGTTGTATTCAGCAAGGGAAAGCAAGCTGCTTGATGTGTTCCTACAATGAGGTGAATGGTGTTCCTGCTTGTGCTAGCGAGGAACTCCTGGGACTGGCTAGAGACAAGTGGGGGTTTAAAGGGTACATCACCTCAGATTGTGATGCTGTGGCCACGGTTTATGAGTATCAGAAATACGCAAAATCCCAGGAGGATGCTGTTGCTGACGTTCTCAAAGCAGGTATGGATATTAATTGCGGGACGTTTATGCTTCGACATACTGAATCTGCTATTGAGCAAGGAAAGGTTAAAGAGGAAGATTTAGATCGAGCACTTCTTAACCTTTTCTCTGTTCAACTGCGCCTTGGACTGTTTGATGGAGACCCTATAAGAGGTCGGTTTGGCAAATTGGGACCAAAGGATGTTTGCACCCAAGAACACAAAACACTGGCACTTGATGCTGCAAGGCAGGGGATTGTACTGCTGAAGAATGACAAGAAGTTCCTTCCCTTGGATAGGGATATTGGTGCCTCCTTAGCTGTCATTGGTCCATTGGCAACTACAACCAAATTAGGTGGTGGCTACTCAGGAATTCCTTGCTCCTCATCAAGCTTATATGAAGGACTTGGAGAGTTTGCAGAGAGGATATCATACGCTTTTGGTTGCTATGATGTACCATGTGATTCTGATGACGGTTTTGCTGAGGCCATTGACACTGCAAAGCAAGCTGATTTTGTTGTTATAGTTGCTGGGCTTGATGCAACGCAAGAGACAGAGGATCATGACCGAGTTAGTCTTCTCTTGCCTGGTAAACAAATGAACCTTGTATCATCTGTAGCTGATGCTAGTAAAAATCCAGTTATTCTTGTTCTTATTGGTGGAGGACCTCTTGATGTCTCTTTTGCTGAAAAAAATCCACAAATCGCAAGTATTATTTGGTTGGGATACCCTGGTGAAGCTGGTGGAAAAGCTCTAGCTGAAATTATCTTTGGAGAGTTTAATCCAGCCGGAAGACTGCCAATGACTTGGTACCCTGAGGCATTTACTAATGTTCCCATGAATGAGATGAGCATGCGAGCTGATCCTTCACGTGGTTATCCAGGAAGGACCTACCGGTTTTATACTGGAGGTAGAGTATATGGATTTGGGCATGGTTTAAGTTTCAGTGATTTTTCATACAATTTCTTATCAGCTCCAAGTAAAATTAGTTTGTCTAGAACCATCAAAGATGGTTCTAGAAAGAGATTATTATATCAGGTAGAGAATGAGGTTTATGGAGTTGATTATGTTCCAGTTAATCAGTTGCAAAATTGCAACAAATTGAGCTTCTCAGTGCATATTTCTGTGATGAACCTTGGTGGTTTGGATGGAAGCCATGTTGTAATGTTGTTCTCTAAAGGGCCAAAAGTTGTAGATGGTTCTCCAGAAACCCAATTGGTTGGGTTCAGCCGTCTGCATACTATTTCTAGCAAACCAACTGAAACAAGCATTTTGGTGCATCCTTGTGAACACTTGAGCTTTGCAGACAAGCAAGGAAAAAGGATTTTGCCCTTGGGCCCCCACACTTTGAGTGTAGGGGACTTAGAGCACGTTGTTTCAATTGAAATTTATTGA

>Glyma.09g202900.2 sequence-type=CDS polypeptide=Glyma.09g202900.2.p locus=Glyma.09g202900 ID=Glyma.09g202900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCAAAGCAATGGCAATGGAGTTCCGCTTGGACGTTGCTTCTCTTTCTCATCTTCTTCCTCTCCTCAACAACAACAAGCACCACTGACTACGCTTGCAAATTCTCCCAGTCCCACCCCTTCTGCGACACTTCCCTCCCCACTCTCACACGTGCGCGCTCCCTCGTGTCCCTCCTCACTCTCCCTGAGAAGATCCTCCTCCTCTCCAACAACGCCTCCTCCATCCCCCGCCTCGGCATCCCCGCCTACCAGTGGTGGTCCGAGTCCCTCCACGGCCTCGCCCTCAACGGCCCCGGCGTCTCCTTCGCCGGCGCCGTCCCCTCCGCCACCAGCTTCCCCCAGGTCATCCTCTCCGCCGCCTCCTTCAACCGCTCCCTCTGGCTCCGCACCGCCGCCGCCATCGCCCGCGAGGCCCGCGCCATGTTTAACGTGGGCCAGGCCGGGCTCACCTTCTGGGCCCCCAACATCAACCTCTTCAGGGACCCTAGGTGGGGCCGCGGCCAGGAGACCCCCGGCGAGGACCCCATGCTCGCTTCTGCTTATGCTGTTGAGTATGTTAGAGGCCTTCAGGGACTCAGCGGAATCCAAGATGCTGTCGTTGTTGATGATGATGATACGCTTATGGTGTCTGCGTGTTGCAAACATTTCACTGCTTATGATTTGGACATGTGGGGACAGTTCTCCAGGTATAACTTCAATGCTGTGGTATCACAACAGGATTTGGAAGACACTTATCAGCCCCCATTTCGTAGTTGTATTCAGCAAGGGAAAGCAAGCTGCTTGATGTGTTCCTACAATGAGGTGAATGGTGTTCCTGCTTGTGCTAGCGAGGAACTCCTGGGACTGGCTAGAGACAAGTGGGGGTTTAAAGGGTACATCACCTCAGATTGTGATGCTGTGGCCACGGTTTATGAGTATCAGAAATACGCAAAATCCCAGGAGGATGCTGTTGCTGACGTTCTCAAAGCAGGTATGGATATTAATTGCGGGACGTTTATGCTTCGACATACTGAATCTGCTATTGAGCAAGGAAAGGTTAAAGAGGAAGATTTAGATCGAGCACTTCTTAACCTTTTCTCTGTTCAACTGCGCCTTGGACTGTTTGATGGAGACCCTATAAGAGGTCGGTTTGGCAAATTGGGACCAAAGGATGTTTGCACCCAAGAACACAAAACACTGGCACTTGATGCTGCAAGGCAGGGGATTGTACTGCTGAAGAATGACAAGAAGTTCCTTCCCTTGGATAGGGATATTGGTGCCTCCTTAGCTGTCATTGGTCCATTGGCAACTACAACCAAATTAGGTGGTGGCTACTCAGGAATTCCTTGCTCCTCATCAAGCTTATATGAAGGACTTGGAGAGTTTGCAGAGAGGATATCATACGCTTTTGGTTGCTATGATGTACCATGTGATTCTGATGACGGTTTTGCTGAGGCCATTGACACTGCAAAGCAAGCTGATTTTGTTGTTATAGTTGCTGGGCTTGATGCAACGCAAGAGACAGAGGATCATGACCGAGTTAGTCTTCTCTTGCCTGGTAAACAAATGAACCTTGTATCATCTGTAGCTGATGCTAGTAAAAATCCAGTTATTCTTGTTCTTATTGGTGGAGGACCTCTTGATGTCTCTTTTGCTGAAAAAAATCCACAAATCGCAAGTATTATTTGGTTGGGATACCCTGGTGAAGCTGGTGGAAAAGCTCTAGCTGAAATTATCTTTGGAGAGTTTAATCCAGCCGGAAGACTGCCAATGACTTGGTACCCTGAGGCATTTACTAATGTTCCCATGAATGAGATGAGCATGCGAGCTGATCCTTCACGTGGTTATCCAGGAAGGACCTACCGGTTTTATACTGGAGATGGTTCTAGAAAGAGATTATTATATCAGGTAGAGAATGAGGTTTATGGAGTTGATTATGTTCCAGTTAATCAGTTGCAAAATTGCAACAAATTGAGCTTCTCAGTGCATATTTCTGTGATGAACCTTGGTGGTTTGGATGGAAGCCATGTTGTAATGTTGTTCTCTAAAGGGCCAAAAGTTGTAGATGGTTCTCCAGAAACCCAATTGGTTGGGTTCAGCCGTCTGCATACTATTTCTAGCAAACCAACTGAAACAAGCATTTTGGTGCATCCTTGTGAACACTTGAGCTTTGCAGACAAGCAAGGAAAAAGGATTTTGCCCTTGGGCCCCCACACTTTGAGTGTAGGGGACTTAGAGCACGTTGTTTCAATTGAAATTTATTGA

Predicted protein sequences of Glyma.09g202900

Limit To All Plant Sequences

>Glyma.09g202900.1.p sequence-type=predicted peptide transcript=Glyma.09g202900.1 locus=Glyma.09g202900 ID=Glyma.09g202900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSKQWQWSSAWTLLLFLIFFLSSTTTSTTDYACKFSQSHPFCDTSLPTLTRARSLVSLLTLPEKILLLSNNASSIPRLGIPAYQWWSESLHGLALNGPGVSFAGAVPSATSFPQVILSAASFNRSLWLRTAAAIAREARAMFNVGQAGLTFWAPNINLFRDPRWGRGQETPGEDPMLASAYAVEYVRGLQGLSGIQDAVVVDDDDTLMVSACCKHFTAYDLDMWGQFSRYNFNAVVSQQDLEDTYQPPFRSCIQQGKASCLMCSYNEVNGVPACASEELLGLARDKWGFKGYITSDCDAVATVYEYQKYAKSQEDAVADVLKAGMDINCGTFMLRHTESAIEQGKVKEEDLDRALLNLFSVQLRLGLFDGDPIRGRFGKLGPKDVCTQEHKTLALDAARQGIVLLKNDKKFLPLDRDIGASLAVIGPLATTTKLGGGYSGIPCSSSSLYEGLGEFAERISYAFGCYDVPCDSDDGFAEAIDTAKQADFVVIVAGLDATQETEDHDRVSLLLPGKQMNLVSSVADASKNPVILVLIGGGPLDVSFAEKNPQIASIIWLGYPGEAGGKALAEIIFGEFNPAGRLPMTWYPEAFTNVPMNEMSMRADPSRGYPGRTYRFYTGGRVYGFGHGLSFSDFSYNFLSAPSKISLSRTIKDGSRKRLLYQVENEVYGVDYVPVNQLQNCNKLSFSVHISVMNLGGLDGSHVVMLFSKGPKVVDGSPETQLVGFSRLHTISSKPTETSILVHPCEHLSFADKQGKRILPLGPHTLSVGDLEHVVSIEIY*

>Glyma.09g202900.2.p sequence-type=predicted peptide transcript=Glyma.09g202900.2 locus=Glyma.09g202900 ID=Glyma.09g202900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSKQWQWSSAWTLLLFLIFFLSSTTTSTTDYACKFSQSHPFCDTSLPTLTRARSLVSLLTLPEKILLLSNNASSIPRLGIPAYQWWSESLHGLALNGPGVSFAGAVPSATSFPQVILSAASFNRSLWLRTAAAIAREARAMFNVGQAGLTFWAPNINLFRDPRWGRGQETPGEDPMLASAYAVEYVRGLQGLSGIQDAVVVDDDDTLMVSACCKHFTAYDLDMWGQFSRYNFNAVVSQQDLEDTYQPPFRSCIQQGKASCLMCSYNEVNGVPACASEELLGLARDKWGFKGYITSDCDAVATVYEYQKYAKSQEDAVADVLKAGMDINCGTFMLRHTESAIEQGKVKEEDLDRALLNLFSVQLRLGLFDGDPIRGRFGKLGPKDVCTQEHKTLALDAARQGIVLLKNDKKFLPLDRDIGASLAVIGPLATTTKLGGGYSGIPCSSSSLYEGLGEFAERISYAFGCYDVPCDSDDGFAEAIDTAKQADFVVIVAGLDATQETEDHDRVSLLLPGKQMNLVSSVADASKNPVILVLIGGGPLDVSFAEKNPQIASIIWLGYPGEAGGKALAEIIFGEFNPAGRLPMTWYPEAFTNVPMNEMSMRADPSRGYPGRTYRFYTGDGSRKRLLYQVENEVYGVDYVPVNQLQNCNKLSFSVHISVMNLGGLDGSHVVMLFSKGPKVVDGSPETQLVGFSRLHTISSKPTETSILVHPCEHLSFADKQGKRILPLGPHTLSVGDLEHVVSIEIY*

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