SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.09g200500

Feature Type:gene_model
Chromosome:Gm09
Start:43371234
stop:43375944
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.09g200500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G15560.1AT CLA,CLA1,DEF,DXPS2,DXS JGI N/AIEA
2.2.1.7EC 1-deoxy-D-xylulose-5-phosphate synthase JGI N/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0016114GO-bp terpenoid biosynthetic process JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0008661GO-mf 1-deoxy-D-xylulose-5-phosphate synthase activity JGI N/AIEA
PTHR11624PantherFam DEHYDROGENASE RELATED JGI N/AIEA
PF02779Pfam Transketolase, pyrimidine binding domain JGI N/AIEA
PF02780Pfam Transketolase, C-terminal domain JGI N/AIEA
PF13292Pfam 1-deoxy-D-xylulose-5-phosphate synthase JGI N/AIEA

Gene model name correspondences to Glyma.09g200500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g33320 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g200500
>Glyma.09g200500.2 sequence-type=CDS polypeptide=Glyma.09g200500.2.p locus=Glyma.09g200500 id=Glyma.09g200500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCTCTCCGCCACCTTCGTTAAGACAAACCGTTCTATACTACCATTTCACCAAAATTCAAGTCCAAACCATGGTCGCATAAAACAGTTGTGTGTGAGGGCTTCAGCAAGTAGCTTGGATGACGACGAGGACAGAACAGTTGTAAGGAAAGAGAAAGATGGGTGGAAGATCAAATTCTCAAGCCAGAAACCAGCAACTCCCTTGCTGGATACAATCAATTATCCTGCACATATGAAGAATCTATCCTTACAGGATCTTGAACAACTCGCTGCAGAGCTAAGGGCAGACGTTGTACATAGTGTATCAAACACTGGGGGGCATCTTAGCTCAAGCTTGGGAGTAGTGGAATTAACAGTAGCTTTGCATCATGTTTTCAACACACCTGAGGACAAGATTATATGGGATGTAGGGCACCAGGCATACCCACACAAGATTCTCACAGGTAGAAGGTCCAGGATGCACACCATTAGGAAAACCTCGGGACTAGCTGGTTTTCCAAAAAGAGAAGAGAGCGTATATGATGTTTTTGGGACAGGGCATAGTTCTACAAGTATATCTGCCGGTCTTGGCATGGCAGTTGCAAGGGATCTATTGGGAAAGAAAAACAGCATTGTCTCGGTGATTGGAGATGGAGCAATGACTGCTGGCCAGGCTTATGAGGCCATGAATAATGCAGGGTTCCTTGACTCTAACATGATAATTATACTTAATGACAACAAGCAAGTTTCTTTGCCTACTGCTACTATTGATGGTCCTGCAACTCCAGTTGGAGCCCTCAGTAGTGCCTTAAGCAAAATTCAAGCAAGCACCAAATTCCGCAAACTTAGAGAAGCTGCGAAAGGCATCACAAAGCAGATAGGAGGAACAACACACCAACTTGCAGCAAAGGTAGATGAGTATGCAAGAGGTATGATCAGTGGTTCTGGTTCTACACTTTTTGAGGAGCTCGGCTTATACTACATAGGCCCTGTGGATGGTCACAACATTGAAGATCTTGTCACCATTTTGGAAAAGGTGAAAGAAATGCCTGCCCCAGGTCCAACATTGATTCATGTTGTGACAGAAAAAGGGAAGGGATACCCCCCAGCAGAAGTAGCTGCTGATAAAATGCATGGTGTGGTTAAGTTTGTACCAACATCAGGTCATCAATTGAAACCAAAATCATCCACACTTACATACACTCAGTACTTTGCCGAGTCATTGATAAAAGAAGCAGAAATAGACAATAAGATAGTAGCCATTCACGCAGCAATGGGTGGCGGGACAGGTCTAAATTATTTCCATAAAAGGTTTCCAGACCGCTGCTTTGATGTGGGGATAGCTGAACAACACGCAGTTACATTTGCAGCTGGTTTAGCAGCAGAAGGTCTCAAGCCATTTTGTGCCATTTATTCATCATTTCTGCAACGTGGATATGATCAGGTGGTCCATGATGTAGATCTTCAGAAACTACCAGTACGATTTGCTATGGATAGAGCTGGTTTGGTTGGAGCAGATGGACCAACGCATTGTGGGGCATTTGATATCACATACATGGCCTGCTTGCCCAATATGGTGGTCATGGCTCCATCAGATGAAGCTGAGCTGATGCACATGGTTGCAACAGCAGCAGCCATAGATGACAGACCAAGCTGCTTTAGATTTCCAAGAGGCAACGGAATTGGAGCCAGTTTGCCCCTCAATAACAAAGGAACTCCACTTGAGATAGGAAAGGGCAGAATTCTGAGACAAGGGAGCAGAGTTGCTATTTTAGGATACGGTTCTGTAGTTCAGCAATGCTTGCAAGCAGCACAAATGCTCAAACCACTAGACATTTCTGTGACAGTTGCTGATGCTAGGTTTTGCAAACCTTTGGATACTGATCTCATAAAGCTATTAGGTAAGGAGCACGAGTTTCTCCTTACAGTGGAAGAGGGTTCTATTGGAGGTTTTGGTTCACATGTTTCACATTTCCTAAGTATAGTTGGCCTCCTGGATGGACCACTGAAGACCTATGATGCTTCCCGATAG

>Glyma.09g200500.3 sequence-type=CDS polypeptide=Glyma.09g200500.3.p locus=Glyma.09g200500 id=Glyma.09g200500.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCTCTCCGCCACCTTCGTTAAGACAAACCGTTCTATACTACCATTTCACCAAAATTCAAGTCCAAACCATGGTCGCATAAAACAGTTGTGTGTGAGGGCTTCAGCAAGTAGCTTGGATGACGACGAGGACAGAACAGTTGTAAGGAAAGAGAAAGATGGGTGGAAGATCAAATTCTCAAGCCAGAAACCAGCAACTCCCTTGCTGGATACAATCAATTATCCTGCACATATGAAGAATCTATCCTTACAGGATCTTGAACAACTCGCTGCAGAGCTAAGGGCAGACGTTGTACATAGTGTATCAAACACTGGGGGGCATCTTAGCTCAAGCTTGGGAGTAGTGGAATTAACAGTAGCTTTGCATCATGTTTTCAACACACCTGAGGACAAGATTATATGGGATGTAGGGCACCAGGCATACCCACACAAGATTCTCACAGGTAGAAGGTCCAGGATGCACACCATTAGGAAAACCTCGGGACTAGCTGGTTTTCCAAAAAGAGAAGAGAGCGTATATGATGTTTTTGGGACAGGGCATAGTTCTACAAGTATATCTGCCGGTCTTGGCATGGCAGTTGCAAGGGATCTATTGGGAAAGAAAAACAGCATTGTCTCGGTGATTGGAGATGGAGCAATGACTGCTGGCCAGGCTTATGAGGCCATGAATAATGCAGGGTTCCTTGACTCTAACATGATAATTATACTTAATGACAACAAGCAAGTTTCTTTGCCTACTGCTACTATTGATGGTCCTGCAACTCCAGTTGGAGCCCTCAGTAGTGCCTTAAGCAAAATTCAAGCAAGCACCAAATTCCGCAAACTTAGAGAAGCTGCGAAAGGCATCACAAAGCAGATAGGAGGAACAACACACCAACTTGCAGCAAAGGTAGATGAGTATGCAAGAGGTATGATCAGTGGTTCTGGTTCTACACTTTTTGAGGAGCTCGGCTTATACTACATAGGCCCTGTGGATGGTCACAACATTGAAGATCTTGTCACCATTTTGGAAAAGGTGAAAGAAATGCCTGCCCCAGGTCCAACATTGATTCATGTTGTGACAGAAAAAGGGAAGGGATACCCCCCAGCAGAAGTAGCTGCTGATAAAATGCATGGTGTGGTTAAGTTTGTACCAACATCAGGTCATCAATTGAAACCAAAATCATCCACACTTACATACACTCAGTACTTTGCCGAGTCATTGATAAAAGAAGCAGAAATAGACAATAAGATAGTAGCCATTCACGCAGCAATGGGTGGCGGGACAGGTCTAAATTATTTCCATAAAAGGTTTCCAGACCGCTGCTTTGATGTGGGGATAGCTGAACAACACGCAGTTACATTTGCAGCTGGTTTAGCAGCAGAAGGTCTCAAGCCATTTTGTGCCATTTATTCATCATTTCTGCAACGTGGATATGATCAGGTGGTCCATGATGTAGATCTTCAGAAACTACCAGTACGATTTGCTATGGATAGAGCTGGTTTGGTTGGAGCAGATGGACCAACGCATTGTGGGGCATTTGATATCACATACATGGCCTGCTTGCCCAATATGGTGGTCATGGCTCCATCAGATGAAGCTGAGCTGATGCACATGGTTGCAACAGCAGCAGCCATAGATGACAGACCAAGCTGCTTTAGATTTCCAAGAGGCAACGGAATTGGAGCCAGTTTGCCCCTCAATAACAAAGGAACTCCACTTGAGATAGGAAAGGGCAGAATTCTGAGACAAGGGAGCAGAGTTGCTATTTTAGGATACGGTTCTGTAGTTCAGCAATGCTTGCAAGCAGCACAAATGCTCAAACCACTAGACATTTCTGTGACAGTTGCTGATGCTAGGTTTTGCAAACCTTTGGATACTGATCTCATAAAGCTATTAGGTAAGGAGCACGAGTTTCTCCTTACAGTGGAAGAGGGTTCTATTGGAGGTTTTGGTTCACATGTTTCACATTTCCTAAGTATAGTTGGCCTCCTGGATGGACCACTGAAGTGGAGACCTATGATGCTTCCCGATAGATACATTGAACATGGATCACCACAAGATCAGACAGAAGAAGCAGGACTTTCATCAAAGAACATTGCCGCAACAGTCTTGTCTCTTCTGGAAAGGCCAAAAGAAGCTCTATTGTTCAAGTAA

>Glyma.09g200500.4 sequence-type=CDS polypeptide=Glyma.09g200500.4.p locus=Glyma.09g200500 id=Glyma.09g200500.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGAATCTATCCTTACAGGATCTTGAACAACTCGCTGCAGAGCTAAGGGCAGACGTTGTACATAGTGTATCAAACACTGGGGGGCATCTTAGCTCAAGCTTGGGAGTAGTGGAATTAACAGTAGCTTTGCATCATGTTTTCAACACACCTGAGGACAAGATTATATGGGATGTAGGGCACCAGGCATACCCACACAAGATTCTCACAGGTAGAAGGTCCAGGATGCACACCATTAGGAAAACCTCGGGACTAGCTGGTTTTCCAAAAAGAGAAGAGAGCGTATATGATGTTTTTGGGACAGGGCATAGTTCTACAAGTATATCTGCCGGTCTTGGCATGGCAGTTGCAAGGGATCTATTGGGAAAGAAAAACAGCATTGTCTCGGTGATTGGAGATGGAGCAATGACTGCTGGCCAGGCTTATGAGGCCATGAATAATGCAGGGTTCCTTGACTCTAACATGATAATTATACTTAATGACAACAAGCAAGTTTCTTTGCCTACTGCTACTATTGATGGTCCTGCAACTCCAGTTGGAGCCCTCAGTAGTGCCTTAAGCAAAATTCAAGCAAGCACCAAATTCCGCAAACTTAGAGAAGCTGCGAAAGGCATCACAAAGCAGATAGGAGGAACAACACACCAACTTGCAGCAAAGGTAGATGAGTATGCAAGAGGTATGATCAGTGGTTCTGGTTCTACACTTTTTGAGGAGCTCGGCTTATACTACATAGGCCCTGTGGATGGTCACAACATTGAAGATCTTGTCACCATTTTGGAAAAGGTGAAAGAAATGCCTGCCCCAGGTCCAACATTGATTCATGTTGTGACAGAAAAAGGGAAGGGATACCCCCCAGCAGAAGTAGCTGCTGATAAAATGCATGGTGTGGTTAAGTTTGTACCAACATCAGGTCATCAATTGAAACCAAAATCATCCACACTTACATACACTCAGTACTTTGCCGAGTCATTGATAAAAGAAGCAGAAATAGACAATAAGATAGTAGCCATTCACGCAGCAATGGGTGGCGGGACAGGTCTAAATTATTTCCATAAAAGGTTTCCAGACCGCTGCTTTGATGTGGGGATAGCTGAACAACACGCAGTTACATTTGCAGCTGGTTTAGCAGCAGAAGGTCTCAAGCCATTTTGTGCCATTTATTCATCATTTCTGCAACGTGGATATGATCAGGTGGTCCATGATGTAGATCTTCAGAAACTACCAGTACGATTTGCTATGGATAGAGCTGGTTTGGTTGGAGCAGATGGACCAACGCATTGTGGGGCATTTGATATCACATACATGGCCTGCTTGCCCAATATGGTGGTCATGGCTCCATCAGATGAAGCTGAGCTGATGCACATGGTTGCAACAGCAGCAGCCATAGATGACAGACCAAGCTGCTTTAGATTTCCAAGAGGCAACGGAATTGGAGCCAGTTTGCCCCTCAATAACAAAGGAACTCCACTTGAGATAGGAAAGGGCAGAATTCTGAGACAAGGGAGCAGAGTTGCTATTTTAGGATACGGTTCTGTAGTTCAGCAATGCTTGCAAGCAGCACAAATGCTCAAACCACTAGACATTTCTGTGACAGTTGCTGATGCTAGGTTTTGCAAACCTTTGGATACTGATCTCATAAAGCTATTAGGTAAGGAGCACGAGTTTCTCCTTACAGTGGAAGAGGGTTCTATTGGAGGTTTTGGTTCACATGTTTCACATTTCCTAAGTATAGTTGGCCTCCTGGATGGACCACTGAAGTGGAGACCTATGATGCTTCCCGATAGATACATTGAACATGGATCACCACAAGATCAGACAGAAGAAGCAGGACTTTCATCAAAGAACATTGCCGCAACAGTCTTGTCTCTTCTGGAAAGGCCAAAAGAAGCTCTATTGTTCAAGTAA
Predicted protein sequences of Glyma.09g200500
>Glyma.09g200500.2.p sequence-type=predicted peptide transcript=Glyma.09g200500.2 locus=Glyma.09g200500 id=Glyma.09g200500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALSATFVKTNRSILPFHQNSSPNHGRIKQLCVRASASSLDDDEDRTVVRKEKDGWKIKFSSQKPATPLLDTINYPAHMKNLSLQDLEQLAAELRADVVHSVSNTGGHLSSSLGVVELTVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKREESVYDVFGTGHSSTSISAGLGMAVARDLLGKKNSIVSVIGDGAMTAGQAYEAMNNAGFLDSNMIIILNDNKQVSLPTATIDGPATPVGALSSALSKIQASTKFRKLREAAKGITKQIGGTTHQLAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIEDLVTILEKVKEMPAPGPTLIHVVTEKGKGYPPAEVAADKMHGVVKFVPTSGHQLKPKSSTLTYTQYFAESLIKEAEIDNKIVAIHAAMGGGTGLNYFHKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKGRILRQGSRVAILGYGSVVQQCLQAAQMLKPLDISVTVADARFCKPLDTDLIKLLGKEHEFLLTVEEGSIGGFGSHVSHFLSIVGLLDGPLKTYDASR*

>Glyma.09g200500.3.p sequence-type=predicted peptide transcript=Glyma.09g200500.3 locus=Glyma.09g200500 id=Glyma.09g200500.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALSATFVKTNRSILPFHQNSSPNHGRIKQLCVRASASSLDDDEDRTVVRKEKDGWKIKFSSQKPATPLLDTINYPAHMKNLSLQDLEQLAAELRADVVHSVSNTGGHLSSSLGVVELTVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKREESVYDVFGTGHSSTSISAGLGMAVARDLLGKKNSIVSVIGDGAMTAGQAYEAMNNAGFLDSNMIIILNDNKQVSLPTATIDGPATPVGALSSALSKIQASTKFRKLREAAKGITKQIGGTTHQLAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIEDLVTILEKVKEMPAPGPTLIHVVTEKGKGYPPAEVAADKMHGVVKFVPTSGHQLKPKSSTLTYTQYFAESLIKEAEIDNKIVAIHAAMGGGTGLNYFHKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKGRILRQGSRVAILGYGSVVQQCLQAAQMLKPLDISVTVADARFCKPLDTDLIKLLGKEHEFLLTVEEGSIGGFGSHVSHFLSIVGLLDGPLKWRPMMLPDRYIEHGSPQDQTEEAGLSSKNIAATVLSLLERPKEALLFK*

>Glyma.09g200500.4.p sequence-type=predicted peptide transcript=Glyma.09g200500.4 locus=Glyma.09g200500 id=Glyma.09g200500.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKNLSLQDLEQLAAELRADVVHSVSNTGGHLSSSLGVVELTVALHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKREESVYDVFGTGHSSTSISAGLGMAVARDLLGKKNSIVSVIGDGAMTAGQAYEAMNNAGFLDSNMIIILNDNKQVSLPTATIDGPATPVGALSSALSKIQASTKFRKLREAAKGITKQIGGTTHQLAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIEDLVTILEKVKEMPAPGPTLIHVVTEKGKGYPPAEVAADKMHGVVKFVPTSGHQLKPKSSTLTYTQYFAESLIKEAEIDNKIVAIHAAMGGGTGLNYFHKRFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKGRILRQGSRVAILGYGSVVQQCLQAAQMLKPLDISVTVADARFCKPLDTDLIKLLGKEHEFLLTVEEGSIGGFGSHVSHFLSIVGLLDGPLKWRPMMLPDRYIEHGSPQDQTEEAGLSSKNIAATVLSLLERPKEALLFK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo