Glyma.09g197000

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Report for Sequence Feature Glyma.09g197000

Feature Type:	gene_model
Chromosome:	Gm09
Start:	42169740
stop:	42181543
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.09g197000

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G17520.1	AT	Endoribonuclease/protein kinase IRE1-like	JGI	N/A	IEA
AT5G24360.3	AT	inositol requiring 1-1	JGI	N/A	IEA
GO:0006397	GO-bp	mRNA processing	EnsemblGenomes	N/A	IEA
GO:0006397	GO-bp	mRNA processing	JGI	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	EnsemblGenomes	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	JGI	N/A	IEA
GO:0090501	GO-bp	RNA phosphodiester bond hydrolysis	EnsemblGenomes	N/A	IEA
GO:0004540	GO-mf	ribonuclease activity	EnsemblGenomes	N/A	IEA
GO:0004540	GO-mf	ribonuclease activity	JGI	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	EnsemblGenomes	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	JGI	N/A	IEA
GO:0005524	GO-mf	ATP binding	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	JGI	N/A	IEA
KOG1027	KOG	Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway	JGI	N/A	IEA
PTHR13954	Panther	IRE1-RELATED	JGI	N/A	IEA
PTHR13954:SF4	Panther		JGI	N/A	IEA
PF00069	PFAM	Protein kinase domain	JGI	N/A	IEA
PF06479	PFAM	Ribonuclease 2-5A	JGI	N/A	IEA

Expression Patterns of Glyma.09g197000

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g197000 not represented in the dataset	Glyma.09g197000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.09g197000

Paralog	Evidence	Comments
Glyma.16g111800	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.09g197000 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma09g32970	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.09g197000

Limit To All Plant Sequences

>Glyma.09g197000.2 sequence-type=transcript locus=Glyma.09g197000 ID=Glyma.09g197000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGAAGTCCAACACGGGAGATGTTTGACGGTTGGAGAAGAAGCGTGGAATCTTCCATGCTGCCTGTAGCTGTTCtcccttacccttcccttcccttccctcccAATAAAAAAAACTCCATCTCCTTTTCCTCATTATATCTTTCTCGCAACCCAAACACTGTCTTCAATCCCCCTTGTCTCAATGAAGTTTCTTCCTTTTCTCATTTCCTTCCTTTTTGCCTCCCTAATCGCAACCTCCGGAACGCCGCATCCCAATGAAGAACGCCTCAACATCCACAGTGCACTTCATCATCGACCCGCTTCCCGATCCCTTCTCTCTCTTCCACCTAAGGCTGCAACCACAGCACTGATTGTGACCCTAGATGGGACTATGTACTTGGTGGATCAATTGGAGAGTGGTTCCACGAGAGTCATATGGTCGTTCTCGACAGGATTGCCAATCTACCAATCATATCAAGCACCAACTAAAAAGGATAATGGTAAAGAAAATGCATCTGCAGCACTGATGAGTGGGTTCATGGAATGCGGGGAAGGGAATGACTGGTCATTGTATATGCACGACAAGCACTTTGGTAAAATGAGAATATCAGAATCTATTGCAGAATATGTAGCTCGTACACCTACATTTTCAGATGATGGAGCAGTAACACTTGGATCCAAAAGAAGCACTTTGTTTGAAGTTGATGCTAAAAGTGGATCAATCATTAAAATCCATGCGATGTCTGATTTTGATAATGCTTCTGCACCTTGTAGTGATGGAAAGCAGGGTGTCACAAATATCCTCAATGTAAAGAATAAGGACCTTGCTGATCCCATGAAGCTGAATTCACCTCAGCCGCTGCTTAAGATTTTTAGGACAGATTATTCTCTTAAATCTGTTGGTCCTAGCTCAGGAATGGTTTTGTGGACTATGGCAGTAGCTGAATTTGAGGCTGTATTATTATGCCAACATACATCTTTTGATCTAGAGGATGAGTATGCTTCTGACAGTAGCCTCAATTTTAGGATGCCATACCCATGTCAAGAGATAAACCAAGTCTTTCGCCTGAAAAAGAATTTCCGGTTTGAACCTTCACTAACTGAAAGACTACTTGTGGATTATCATGAAAATGATATGCTCTCGATGCCTAACTCAAAGCTAATGCTTCCTTCACAGCCAAATATTGATAGATTATTCAATGGTCATGATGATAATATGATGCTCCCTCAACCTCCTGTGGAGATTACAACACCAGGGGAAGTTTATCTGAACAGGACAAGTGAATGGCCAACTCCATTACCTCTTATATTGTTTACGGTCTTTCTTCTGGCCTTTTCACTCATCTATCCTCTAGTGATTGAGAACCAAGATATACTCAAGGACCAAGACAGTGAGTCTGAATTAAAAGGTTCACCTGCTAAGAAAAAGAAAACACGGAAATCAGGGAAGAAAAATGGCACTATCGATACAAGGGAAAAACACCTGTCTCCAGAGAATGAGGATGTTCTGACACAAAAGGATAATGAGAGAGAAGTATGGAAGCATTTCAATCAAGGTGATGAAAGTGTTGATGGACGAAGAATTGGTAAATTATTTGTTTCAAATAAAGAGATTGCTAAGGGAAGCAACGGTACCATTGTCCTTGAGGGAATATATGAATGCCGGGTAGTTGCTGTTAAACGTCTTGTCAAGTCTCATCATGATGTAGCTTATAAAGAAATCCAAAATCTGATTGTGTCTGATCATCATCCAAATATTGTTCGATGGCATGGAGTAGAGTATGATAGTGATTTTGTTTACCTTGCTTTGGAACGTTGTACATGCAATTTAGATGACTTGATTCAAATTTATTCAGATATGTCAGAAAACTTTGCGTTTAGGAAGGACCAAGGTTTCAGATGTTTGATAAAGTCCCAAATGGAGATGGAGAAGTATAATACACAATGTCTTTGGAAGGAAAACGGCTATCCATCTCCTCTATTACTAAAACTAATGAGGGACATTGTTTCTGGGGTTGTTCATTTGCATGAATTGGGAATGATACATCGGGATTTGAAACCACAAAATGTTCTTATAATCAAGGAAAGATCTTTGTGTGCAAAGCTTTCTGATATGGGGATTAGCAAATGTCTTCTTGAAAATATGTCTTCTTTGGGTAATAATGCTACTGGTGGTGGCAGTTCAGGTTGGCAGGCACCAGAACAACTTGTTCGAGGACGTCAAACCCGGGCAGTAGATATATTTAGTTTAGGTTGTGTCCTTTTTTTCTGCATTACTGGAGGAAGACATCCATTTGGAGAACGTATTGAACGGGATATCAATATTTTGAAAAATCAAATGGATCTTTTCTTATTGGAGTTCATTCCTGAAGCCAAAGATCTTATTAGTTGTTTATTAAACCCTAACCCTGATCTAAGGTAAATCATTCTCATTCAATGCATTTTCTGGAGAATGGAAATATCTTTTTTCATATACCTTCATAACTTTTCATCTTGTGATGACTTGCTTAATTGGTATGTGGTATAAAATGGTGAAGTCTCAAAGTCCAAATTATGCATAATAAGATAAGATGTAAGAGTGTACCCTATTTTGGTAATATCTAATGATCAAATCTATTGGAGTAATTTGTGTTTTTCAAGGTCTGCTGCTATCAGTATTCAGGGGGTCATTTCCACA

Coding sequences of Glyma.09g197000

Limit To All Plant Sequences

>Glyma.09g197000.1 sequence-type=CDS polypeptide=Glyma.09g197000.1.p locus=Glyma.09g197000 ID=Glyma.09g197000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGTTTCTTCCTTTTCTCATTTCCTTCCTTTTTGCCTCCCTAATCGCAACCTCCGGAACGCCGCATCCCAATGAAGAACGCCTCAACATCCACAGTGCACTTCATCATCGACCCGCTTCCCGATCCCTTCTCTCTCTTCCACCTAAGGCTGCAACCACAGCACTGATTGTGACCCTAGATGGGACTATGTACTTGGTGGATCAATTGGAGAGTGGTTCCACGAGAGTCATATGGTCGTTCTCGACAGGATTGCCAATCTACCAATCATATCAAGCACCAACTAAAAAGGATAATGGTAAAGAAAATGCATCTGCAGCACTGATGAGTGGGTTCATGGAATGCGGGGAAGGGAATGACTGGTCATTGTATATGCACGACAAGCACTTTGGTAAAATGAGAATATCAGAATCTATTGCAGAATATGTAGCTCGTACACCTACATTTTCAGATGATGGAGCAGTAACACTTGGATCCAAAAGAAGCACTTTGTTTGAAGTTGATGCTAAAAGTGGATCAATCATTAAAATCCATGCGATGTCTGATTTTGATAATGCTTCTGCACCTTGTAGTGATGGAAAGCAGGGTGTCACAAATATCCTCAATGTAAAGAATAAGGACCTTGCTGATCCCATGAAGCTGAATTCACCTCAGCCGCTGCTTAAGATTTTTAGGACAGATTATTCTCTTAAATCTGTTGGTCCTAGCTCAGGAATGGTTTTGTGGACTATGGCAGTAGCTGAATTTGAGGCTGTATTATTATGCCAACATACATCTTTTGATCTAGAGGATGAGTATGCTTCTGACAGTAGCCTCAATTTTAGGATGCCATACCCATGTCAAGAGATAAACCAAGTCTTTCGCCTGAAAAAGAATTTCCGGTTTGAACCTTCACTAACTGAAAGACTACTTGTGGATTATCATGAAAATGATATGCTCTCGATGCCTAACTCAAAGCTAATGCTTCCTTCACAGCCAAATATTGATAGATTATTCAATGGTCATGATGATAATATGATGCTCCCTCAACCTCCTGTGGAGATTACAACACCAGGGGAAGTTTATCTGAACAGGACAAGTGAATGGCCAACTCCATTACCTCTTATATTGTTTACGGTCTTTCTTCTGGCCTTTTCACTCATCTATCCTCTAGTGATTGAGAACCAAGATATACTCAAGGACCAAGACAGTGAGTCTGAATTAAAAGGTTCACCTGCTAAGAAAAAGAAAACACGGAAATCAGGGAAGAAAAATGGCACTATCGATACAAGGGAAAAACACCTGTCTCCAGAGAATGAGGATGTTCTGACACAAAAGGATAATGAGAGAGAAGTATGGAAGCATTTCAATCAAGGTGATGAAAGTGTTGATGGACGAAGAATTGGTAAATTATTTGTTTCAAATAAAGAGATTGCTAAGGGAAGCAACGGTACCATTGTCCTTGAGGGAATATATGAATGCCGGGTAGTTGCTGTTAAACGTCTTGTCAAGTCTCATCATGATGTAGCTTATAAAGAAATCCAAAATCTGATTGTGTCTGATCATCATCCAAATATTGTTCGATGGCATGGAGTAGAGTATGATAGTGATTTTGTTTACCTTGCTTTGGAACGTTGTACATGCAATTTAGATGACTTGATTCAAATTTATTCAGATATGTCAGAAAACTTTGCGTTTAGGAAGGACCAAGGTTTCAGATGTTTGATAAAGTCCCAAATGGAGATGGAGAAGTATAATACACAATGTCTTTGGAAGGAAAACGGCTATCCATCTCCTCTATTACTAAAACTAATGAGGGACATTGTTTCTGGGGTTGTTCATTTGCATGAATTGGGAATGATACATCGGGATTTGAAACCACAAAATGTTCTTATAATCAAGGAAAGATCTTTGTGTGCAAAGCTTTCTGATATGGGGATTAGCAAATGTCTTCTTGAAAATATGTCTTCTTTGGGTAATAATGCTACTGGTGGTGGCAGTTCAGGTTGGCAGGCACCAGAACAACTTGTTCGAGGACGTCAAACCCGGGCAGTAGATATATTTAGTTTAGGTTGTGTCCTTTTTTTCTGCATTACTGGAGGAAGACATCCATTTGGAGAACGTATTGAACGGGATATCAATATTTTGAAAAATCAAATGGATCTTTTCTTATTGGAGTTCATTCCTGAAGCCAAAGATCTTATTAGTTGTTTATTAAACCCTAACCCTGATCTAAGGCCAAAGGCGACTGAAGTATTGTACCATCCTTTTTTCTGGAGTTCCGAGATGAGACTTTCCTTTTTACGTGACACCAGTGACAGGGTGGAACTGGAGAATAGAGAGACAAATTCTGATCTTTTGGTGACATTAGAAAGCGTTGCTACAGTGGCCTTGGGTGGAAAATGGGATGAAAGGATGGAACCAACTTTCATTGCTAACATCGGTCATTACCGGCGGTACAATTTTAACAGTGTTCGAGACTTGTTGCGAGTTATGAGAAACAAACTAAATCATTATAGAGAATTGCCTCGAGAAATCCAGGAACTTGTAGGACCTGTTCCTGAAGGATTCTTCAACTACTTTGCAAGTCGATACCCAAGACTCTTGATTGAAGTGTATAAAGTTATACTCCAATACTGCAAGGAGGAAGAATGTTTCCAAAGATATTTTAAAAATGTTGATTAG

>Glyma.09g197000.2 sequence-type=CDS polypeptide=Glyma.09g197000.2.p locus=Glyma.09g197000 ID=Glyma.09g197000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGTTTCTTCCTTTTCTCATTTCCTTCCTTTTTGCCTCCCTAATCGCAACCTCCGGAACGCCGCATCCCAATGAAGAACGCCTCAACATCCACAGTGCACTTCATCATCGACCCGCTTCCCGATCCCTTCTCTCTCTTCCACCTAAGGCTGCAACCACAGCACTGATTGTGACCCTAGATGGGACTATGTACTTGGTGGATCAATTGGAGAGTGGTTCCACGAGAGTCATATGGTCGTTCTCGACAGGATTGCCAATCTACCAATCATATCAAGCACCAACTAAAAAGGATAATGGTAAAGAAAATGCATCTGCAGCACTGATGAGTGGGTTCATGGAATGCGGGGAAGGGAATGACTGGTCATTGTATATGCACGACAAGCACTTTGGTAAAATGAGAATATCAGAATCTATTGCAGAATATGTAGCTCGTACACCTACATTTTCAGATGATGGAGCAGTAACACTTGGATCCAAAAGAAGCACTTTGTTTGAAGTTGATGCTAAAAGTGGATCAATCATTAAAATCCATGCGATGTCTGATTTTGATAATGCTTCTGCACCTTGTAGTGATGGAAAGCAGGGTGTCACAAATATCCTCAATGTAAAGAATAAGGACCTTGCTGATCCCATGAAGCTGAATTCACCTCAGCCGCTGCTTAAGATTTTTAGGACAGATTATTCTCTTAAATCTGTTGGTCCTAGCTCAGGAATGGTTTTGTGGACTATGGCAGTAGCTGAATTTGAGGCTGTATTATTATGCCAACATACATCTTTTGATCTAGAGGATGAGTATGCTTCTGACAGTAGCCTCAATTTTAGGATGCCATACCCATGTCAAGAGATAAACCAAGTCTTTCGCCTGAAAAAGAATTTCCGGTTTGAACCTTCACTAACTGAAAGACTACTTGTGGATTATCATGAAAATGATATGCTCTCGATGCCTAACTCAAAGCTAATGCTTCCTTCACAGCCAAATATTGATAGATTATTCAATGGTCATGATGATAATATGATGCTCCCTCAACCTCCTGTGGAGATTACAACACCAGGGGAAGTTTATCTGAACAGGACAAGTGAATGGCCAACTCCATTACCTCTTATATTGTTTACGGTCTTTCTTCTGGCCTTTTCACTCATCTATCCTCTAGTGATTGAGAACCAAGATATACTCAAGGACCAAGACAGTGAGTCTGAATTAAAAGGTTCACCTGCTAAGAAAAAGAAAACACGGAAATCAGGGAAGAAAAATGGCACTATCGATACAAGGGAAAAACACCTGTCTCCAGAGAATGAGGATGTTCTGACACAAAAGGATAATGAGAGAGAAGTATGGAAGCATTTCAATCAAGGTGATGAAAGTGTTGATGGACGAAGAATTGGTAAATTATTTGTTTCAAATAAAGAGATTGCTAAGGGAAGCAACGGTACCATTGTCCTTGAGGGAATATATGAATGCCGGGTAGTTGCTGTTAAACGTCTTGTCAAGTCTCATCATGATGTAGCTTATAAAGAAATCCAAAATCTGATTGTGTCTGATCATCATCCAAATATTGTTCGATGGCATGGAGTAGAGTATGATAGTGATTTTGTTTACCTTGCTTTGGAACGTTGTACATGCAATTTAGATGACTTGATTCAAATTTATTCAGATATGTCAGAAAACTTTGCGTTTAGGAAGGACCAAGGTTTCAGATGTTTGATAAAGTCCCAAATGGAGATGGAGAAGTATAATACACAATGTCTTTGGAAGGAAAACGGCTATCCATCTCCTCTATTACTAAAACTAATGAGGGACATTGTTTCTGGGGTTGTTCATTTGCATGAATTGGGAATGATACATCGGGATTTGAAACCACAAAATGTTCTTATAATCAAGGAAAGATCTTTGTGTGCAAAGCTTTCTGATATGGGGATTAGCAAATGTCTTCTTGAAAATATGTCTTCTTTGGGTAATAATGCTACTGGTGGTGGCAGTTCAGGTTGGCAGGCACCAGAACAACTTGTTCGAGGACGTCAAACCCGGGCAGTAGATATATTTAGTTTAGGTTGTGTCCTTTTTTTCTGCATTACTGGAGGAAGACATCCATTTGGAGAACGTATTGAACGGGATATCAATATTTTGAAAAATCAAATGGATCTTTTCTTATTGGAGTTCATTCCTGAAGCCAAAGATCTTATTAGTTGTTTATTAAACCCTAACCCTGATCTAAGGTAA

Predicted protein sequences of Glyma.09g197000

Limit To All Plant Sequences

>Glyma.09g197000.1.p sequence-type=predicted peptide transcript=Glyma.09g197000.1 locus=Glyma.09g197000 ID=Glyma.09g197000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKFLPFLISFLFASLIATSGTPHPNEERLNIHSALHHRPASRSLLSLPPKAATTALIVTLDGTMYLVDQLESGSTRVIWSFSTGLPIYQSYQAPTKKDNGKENASAALMSGFMECGEGNDWSLYMHDKHFGKMRISESIAEYVARTPTFSDDGAVTLGSKRSTLFEVDAKSGSIIKIHAMSDFDNASAPCSDGKQGVTNILNVKNKDLADPMKLNSPQPLLKIFRTDYSLKSVGPSSGMVLWTMAVAEFEAVLLCQHTSFDLEDEYASDSSLNFRMPYPCQEINQVFRLKKNFRFEPSLTERLLVDYHENDMLSMPNSKLMLPSQPNIDRLFNGHDDNMMLPQPPVEITTPGEVYLNRTSEWPTPLPLILFTVFLLAFSLIYPLVIENQDILKDQDSESELKGSPAKKKKTRKSGKKNGTIDTREKHLSPENEDVLTQKDNEREVWKHFNQGDESVDGRRIGKLFVSNKEIAKGSNGTIVLEGIYECRVVAVKRLVKSHHDVAYKEIQNLIVSDHHPNIVRWHGVEYDSDFVYLALERCTCNLDDLIQIYSDMSENFAFRKDQGFRCLIKSQMEMEKYNTQCLWKENGYPSPLLLKLMRDIVSGVVHLHELGMIHRDLKPQNVLIIKERSLCAKLSDMGISKCLLENMSSLGNNATGGGSSGWQAPEQLVRGRQTRAVDIFSLGCVLFFCITGGRHPFGERIERDINILKNQMDLFLLEFIPEAKDLISCLLNPNPDLRPKATEVLYHPFFWSSEMRLSFLRDTSDRVELENRETNSDLLVTLESVATVALGGKWDERMEPTFIANIGHYRRYNFNSVRDLLRVMRNKLNHYRELPREIQELVGPVPEGFFNYFASRYPRLLIEVYKVILQYCKEEECFQRYFKNVD*

>Glyma.09g197000.2.p sequence-type=predicted peptide transcript=Glyma.09g197000.2 locus=Glyma.09g197000 ID=Glyma.09g197000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKFLPFLISFLFASLIATSGTPHPNEERLNIHSALHHRPASRSLLSLPPKAATTALIVTLDGTMYLVDQLESGSTRVIWSFSTGLPIYQSYQAPTKKDNGKENASAALMSGFMECGEGNDWSLYMHDKHFGKMRISESIAEYVARTPTFSDDGAVTLGSKRSTLFEVDAKSGSIIKIHAMSDFDNASAPCSDGKQGVTNILNVKNKDLADPMKLNSPQPLLKIFRTDYSLKSVGPSSGMVLWTMAVAEFEAVLLCQHTSFDLEDEYASDSSLNFRMPYPCQEINQVFRLKKNFRFEPSLTERLLVDYHENDMLSMPNSKLMLPSQPNIDRLFNGHDDNMMLPQPPVEITTPGEVYLNRTSEWPTPLPLILFTVFLLAFSLIYPLVIENQDILKDQDSESELKGSPAKKKKTRKSGKKNGTIDTREKHLSPENEDVLTQKDNEREVWKHFNQGDESVDGRRIGKLFVSNKEIAKGSNGTIVLEGIYECRVVAVKRLVKSHHDVAYKEIQNLIVSDHHPNIVRWHGVEYDSDFVYLALERCTCNLDDLIQIYSDMSENFAFRKDQGFRCLIKSQMEMEKYNTQCLWKENGYPSPLLLKLMRDIVSGVVHLHELGMIHRDLKPQNVLIIKERSLCAKLSDMGISKCLLENMSSLGNNATGGGSSGWQAPEQLVRGRQTRAVDIFSLGCVLFFCITGGRHPFGERIERDINILKNQMDLFLLEFIPEAKDLISCLLNPNPDLR*

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