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Report for Sequence Feature Glyma.09g191700

Feature Type:gene_model
Chromosome:Gm09
Start:41642568
stop:41650351
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.09g191700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G29010.1AT Enoyl-CoA hydratase/isomerase family JGI N/AIEA
GO:0006631GO-bp fatty acid metabolic process EnsemblGenomesN/AIEA
GO:0006631GO-bp fatty acid metabolic process JGI N/AIEA
GO:0006635GO-bp fatty acid beta-oxidation EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process EnsemblGenomesN/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0005777GO-cc peroxisome EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0003857GO-mf 3-hydroxyacyl-CoA dehydrogenase activity EnsemblGenomesN/AIEA
GO:0003857GO-mf 3-hydroxyacyl-CoA dehydrogenase activity JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
KOG1683 KOG Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase JGI N/AIEA
PTHR23309Panther 3-HYDROXYACYL-COA DEHYROGENASE JGI N/AIEA
PF00378PFAM Enoyl-CoA hydratase/isomerase family JGI N/AIEA
PF00725PFAM 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JGI N/AIEA
PF02737PFAM 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JGI N/AIEA
PWY-5136SoyCyc9 fatty acid β-oxidation II (peroxisome) Plant Metabolic Network ISS
PWY-5137SoyCyc9 fatty acid β-oxidation III (unsaturated, odd number) Plant Metabolic Network ISS
PWY-5138SoyCyc9 unsaturated, even numbered fatty acid β-oxidation Plant Metabolic Network ISS
PWY-561SoyCyc9 superpathway of glyoxylate cycle and fatty acid degradation Plant Metabolic Network ISS
PWY-6837SoyCyc9 fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) Plant Metabolic Network ISS
PWY-7036SoyCyc9 very long chain fatty acid biosynthesis II Plant Metabolic Network ISS
PWY-735SoyCyc9 jasmonic acid biosynthesis Plant Metabolic Network ISS
GN7V-45343SoyCyc9-rxn enoyl-CoA isomerase Plant Metabolic Network ISS

Expression Patterns of Glyma.09g191700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.09g191700 not represented in the dataset
Glyma.09g191700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.09g191700
ParalogEvidenceComments
Glyma.07g085200 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.09g191700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g32430 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.09g191700
>Glyma.09g191700.2 sequence-type=transcript locus=Glyma.09g191700 ID=Glyma.09g191700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AACAAAAATTATGATTTCTTAATTTTCTTGATTGCGAGAGTCAGTAGCGAAATCCCCCCGAAATGATGAAGGGTCTTTCTTTACATTGATTGTCAGTTTGCCACTTTCTACTTTCCATCATCGCCTTGGGACTTATCCTTCTTAAACCCATTTCCTTCACTTCCATTTCATGCGAAAAAGCCTTACTTGATTCTTCGAAAAGGAAGGAACTTGGGACTTGTTTCTCTCAGAGATGGCGTTGCCTAAGGTTGATTTCGAGGTTGGAGCTGATGGGGTTGCTGTCATCACTATGTGCAACCCACCCGTCAATGCTTTGGCCATTCCAAttatCATGGGGTTGAAGAACAGATTTGATGAGGCAGCTAGGAGGAATGATGTGAAAGCTATAGTTTTGACTGGCAAAGGTGGGAGATTTTCTGGTGGATTTGATATCAGTGTTATGCAGAAGGTTCACCGGACTGGGGATTCCTCGCATCTCCCTGATGTCTCAGTGGAACTAGTAGTTAATTCAATTGAAGATTCGAAGAAGCCTGTTGTTGCAGCAGTAGCAGGGCTTGCTCTTGGAGGTGGCTTAGAACTGGCTATGGGATGCCATGCCCGTGTTGCGGCTCCAAGAGCTCAATTGGGTCTACCAGAGCTGACTCTTGGTATTATTCCTGGATTTGGAGGAACACAGCGTCTTCCAAGGCTTATTGGGCTGTCTAAAGCTGTTGAAATGATGCTGACATCTAAACCAATCACATCGGAAGAAGGGAGGAAATTAGGACTTATTGATGCTATTGTGTCTTCTGAGGAGTTACTAAATGCATCTAGGTTGTGGGCACTTGAAATTGGAGAGAGGTGCAAACCTTGGGTTCGTTCACTTCATAGGACGGACAAAATTGGTTCTCTGTCTGAAGCACGTGAGGTGTTGAGAACTGCCAGGCAACAAGTAAAGAAGACTGTTCCACATTTGCCTCAGCAGCTGGCTTGTGTAGATGTGATTGAACATGGAATAGTCCATGGAGGCTACAGTGGTGTTCTAAAGGAGGCAGAAGTATTCAAACAATTGGTTGTATCTGACACCGCAAAAGGTTTAATTAATGTCTTCTTTTCTCAGCGGGCGATATCAAAGGTGCCTGGCGTAACCGATATCGGCCTTAAGCCCAGAAATGTGAAAAAAGCTGCTGTTATTGGAGGAGGTCTAATGGGTTCTGGCATTGCTACAGCTCTTATACTAGGCAACATTCATGTTATACTCAAGGAAATCAATCCTGAATTTCTTCTGAAGGGAATAAAAACAATAGAAGCAAATGTTAATGGCTTAGTAAGAAGAGGAAAGTTGACGAAACAGAAGGCAGATGCTGCACTGTCACTGCTTAGAGGTGTTCTGGATTACTCAGAATTTAAAGATGTGGACTTGGTCATTGAGGCTGTAATTGAAAATATCAGTCTCAAACAAACTATATTTAGTGATCTTGAGAAGATTTGTCCTCCACACTGCATTTTAGCATCAAACACATCAACTATTGACCTTGATGTTGTTGGTAAAACGACCAGCTCTCAAAATCGCATTGCGGGTGCTCATTTTTTCAGTCCTGCCCACATTATGCCTCTTTTGGAGATTATACGAACCGATAAAACATCTGCACAAGTGATTCTTGATCTGATAACAGTTGGTAAAATCATAAAGAAGACACCTGTTGTGGTGGGTAATTGTACTGGCTTTGCAGTGAATAAAACATTCTTCCCATATTCACAAGGTGCCCATTTGTTGGTCAACTTGGGCGTGGATGTTTTCAGAATTGACACATTGATACGCAACTTTGGCTTTCCGATTGGTCCTTTCCAGCTTCAAGACTTGGCTGGCTATGGAGTTGCCGTTGCTACCTCAAAAGTATTTGCTGATGCTTTTTCTGATCGCATATTTAAATCTCCACTGCTTGATCTTCTGATCAAATCTGGGCGAAATGGCAAAAACAATGGGAAAGGGTACTACATTTATGAAAAGGCTGGCAAGCCAAAACCTGATCCTTCAATACTACCAATCATTGAGGAGTCTAGAAGACTTTGCAATATTATGCCCAATGGAAAGCCTATATCTGTTACTGACCAAGAGATCGTGGAGATGATACTCTTCCCAGTAGTTAATGAGGCATGCCGTGTTCTAGAAGATGGAGTTGTTATTCGAGCATCAGACCTTGACATTGCATCTGTTCTTGGAATGAGCTTCCCAAATTACCGGTTTGATTTCCTTTATTCACTCTTTAAAATTGACAATAACTGAGAAATGGGACCAAGGAGATAAAGCT
Coding sequences of Glyma.09g191700
>Glyma.09g191700.1 sequence-type=CDS polypeptide=Glyma.09g191700.1.p locus=Glyma.09g191700 ID=Glyma.09g191700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGTTGCCTAAGGTTGATTTCGAGGTTGGAGCTGATGGGGTTGCTGTCATCACTATGTGCAACCCACCCGTCAATGCTTTGGCCATTCCAATTATCATGGGGTTGAAGAACAGATTTGATGAGGCAGCTAGGAGGAATGATGTGAAAGCTATAGTTTTGACTGGCAAAGGTGGGAGATTTTCTGGTGGATTTGATATCAGTGTTATGCAGAAGGTTCACCGGACTGGGGATTCCTCGCATCTCCCTGATGTCTCAGTGGAACTAGTAGTTAATTCAATTGAAGATTCGAAGAAGCCTGTTGTTGCAGCAGTAGCAGGGCTTGCTCTTGGAGGTGGCTTAGAACTGGCTATGGGATGCCATGCCCGTGTTGCGGCTCCAAGAGCTCAATTGGGTCTACCAGAGCTGACTCTTGGTATTATTCCTGGATTTGGAGGAACACAGCGTCTTCCAAGGCTTATTGGGCTGTCTAAAGCTGTTGAAATGATGCTGACATCTAAACCAATCACATCGGAAGAAGGGAGGAAATTAGGACTTATTGATGCTATTGTGTCTTCTGAGGAGTTACTAAATGCATCTAGGTTGTGGGCACTTGAAATTGGAGAGAGGTGCAAACCTTGGGTTCGTTCACTTCATAGGACGGACAAAATTGGTTCTCTGTCTGAAGCACGTGAGGTGTTGAGAACTGCCAGGCAACAAGTAAAGAAGACTGTTCCACATTTGCCTCAGCAGCTGGCTTGTGTAGATGTGATTGAACATGGAATAGTCCATGGAGGCTACAGTGGTGTTCTAAAGGAGGCAGAAGTATTCAAACAATTGGTTGTATCTGACACCGCAAAAGGTTTAATTAATGTCTTCTTTTCTCAGCGGGCGATATCAAAGGTGCCTGGCGTAACCGATATCGGCCTTAAGCCCAGAAATGTGAAAAAAGCTGCTGTTATTGGAGGAGGTCTAATGGGTTCTGGCATTGCTACAGCTCTTATACTAGGCAACATTCATGTTATACTCAAGGAAATCAATCCTGAATTTCTTCTGAAGGGAATAAAAACAATAGAAGCAAATGTTAATGGCTTAGTAAGAAGAGGAAAGTTGACGAAACAGAAGGCAGATGCTGCACTGTCACTGCTTAGAGGTGTTCTGGATTACTCAGAATTTAAAGATGTGGACTTGGTCATTGAGGCTGTAATTGAAAATATCAGTCTCAAACAAACTATATTTAGTGATCTTGAGAAGATTTGTCCTCCACACTGCATTTTAGCATCAAACACATCAACTATTGACCTTGATGTTGTTGGTAAAACGACCAGCTCTCAAAATCGCATTGCGGGTGCTCATTTTTTCAGTCCTGCCCACATTATGCCTCTTTTGGAGATTATACGAACCGATAAAACATCTGCACAAGTGATTCTTGATCTGATAACAGTTGGTAAAATCATAAAGAAGACACCTGTTGTGGTGGGTAATTGTACTGGCTTTGCAGTGAATAAAACATTCTTCCCATATTCACAAGGTGCCCATTTGTTGGTCAACTTGGGCGTGGATGTTTTCAGAATTGACACATTGATACGCAACTTTGGCTTTCCGATTGGTCCTTTCCAGCTTCAAGACTTGGCTGGCTATGGAGTTGCCGTTGCTACCTCAAAAGTATTTGCTGATGCTTTTTCTGATCGCATATTTAAATCTCCACTGCTTGATCTTCTGATCAAATCTGGGCGAAATGGCAAAAACAATGGGAAAGGGTACTACATTTATGAAAAGGCTGGCAAGCCAAAACCTGATCCTTCAATACTACCAATCATTGAGGAGTCTAGAAGACTTTGCAATATTATGCCCAATGGAAAGCCTATATCTGTTACTGACCAAGAGATCGTGGAGATGATACTCTTCCCAGTAGTTAATGAGGCATGCCGTGTTCTAGAAGATGGAGTTGTTATTCGAGCATCAGACCTTGACATTGCATCTGTTCTTGGAATGAGCTTCCCAAATTACCGGGGTGGCATTGTTTTCTGGGCAGACTTGGTTGGGGCCAATCATATATATACCAGCCTAAAAAAATGGGCACAATTATATGGTAACTTCTATAAACCCTCAAGGTATTTGGAAGAAAGAGCACTCAAAGGCATTCCCTTGAGTGCACCTGCTTCATCTACTCCAAAGTCAATGGCACGTCTATGA

>Glyma.09g191700.2 sequence-type=CDS polypeptide=Glyma.09g191700.2.p locus=Glyma.09g191700 ID=Glyma.09g191700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGTTGCCTAAGGTTGATTTCGAGGTTGGAGCTGATGGGGTTGCTGTCATCACTATGTGCAACCCACCCGTCAATGCTTTGGCCATTCCAATTATCATGGGGTTGAAGAACAGATTTGATGAGGCAGCTAGGAGGAATGATGTGAAAGCTATAGTTTTGACTGGCAAAGGTGGGAGATTTTCTGGTGGATTTGATATCAGTGTTATGCAGAAGGTTCACCGGACTGGGGATTCCTCGCATCTCCCTGATGTCTCAGTGGAACTAGTAGTTAATTCAATTGAAGATTCGAAGAAGCCTGTTGTTGCAGCAGTAGCAGGGCTTGCTCTTGGAGGTGGCTTAGAACTGGCTATGGGATGCCATGCCCGTGTTGCGGCTCCAAGAGCTCAATTGGGTCTACCAGAGCTGACTCTTGGTATTATTCCTGGATTTGGAGGAACACAGCGTCTTCCAAGGCTTATTGGGCTGTCTAAAGCTGTTGAAATGATGCTGACATCTAAACCAATCACATCGGAAGAAGGGAGGAAATTAGGACTTATTGATGCTATTGTGTCTTCTGAGGAGTTACTAAATGCATCTAGGTTGTGGGCACTTGAAATTGGAGAGAGGTGCAAACCTTGGGTTCGTTCACTTCATAGGACGGACAAAATTGGTTCTCTGTCTGAAGCACGTGAGGTGTTGAGAACTGCCAGGCAACAAGTAAAGAAGACTGTTCCACATTTGCCTCAGCAGCTGGCTTGTGTAGATGTGATTGAACATGGAATAGTCCATGGAGGCTACAGTGGTGTTCTAAAGGAGGCAGAAGTATTCAAACAATTGGTTGTATCTGACACCGCAAAAGGTTTAATTAATGTCTTCTTTTCTCAGCGGGCGATATCAAAGGTGCCTGGCGTAACCGATATCGGCCTTAAGCCCAGAAATGTGAAAAAAGCTGCTGTTATTGGAGGAGGTCTAATGGGTTCTGGCATTGCTACAGCTCTTATACTAGGCAACATTCATGTTATACTCAAGGAAATCAATCCTGAATTTCTTCTGAAGGGAATAAAAACAATAGAAGCAAATGTTAATGGCTTAGTAAGAAGAGGAAAGTTGACGAAACAGAAGGCAGATGCTGCACTGTCACTGCTTAGAGGTGTTCTGGATTACTCAGAATTTAAAGATGTGGACTTGGTCATTGAGGCTGTAATTGAAAATATCAGTCTCAAACAAACTATATTTAGTGATCTTGAGAAGATTTGTCCTCCACACTGCATTTTAGCATCAAACACATCAACTATTGACCTTGATGTTGTTGGTAAAACGACCAGCTCTCAAAATCGCATTGCGGGTGCTCATTTTTTCAGTCCTGCCCACATTATGCCTCTTTTGGAGATTATACGAACCGATAAAACATCTGCACAAGTGATTCTTGATCTGATAACAGTTGGTAAAATCATAAAGAAGACACCTGTTGTGGTGGGTAATTGTACTGGCTTTGCAGTGAATAAAACATTCTTCCCATATTCACAAGGTGCCCATTTGTTGGTCAACTTGGGCGTGGATGTTTTCAGAATTGACACATTGATACGCAACTTTGGCTTTCCGATTGGTCCTTTCCAGCTTCAAGACTTGGCTGGCTATGGAGTTGCCGTTGCTACCTCAAAAGTATTTGCTGATGCTTTTTCTGATCGCATATTTAAATCTCCACTGCTTGATCTTCTGATCAAATCTGGGCGAAATGGCAAAAACAATGGGAAAGGGTACTACATTTATGAAAAGGCTGGCAAGCCAAAACCTGATCCTTCAATACTACCAATCATTGAGGAGTCTAGAAGACTTTGCAATATTATGCCCAATGGAAAGCCTATATCTGTTACTGACCAAGAGATCGTGGAGATGATACTCTTCCCAGTAGTTAATGAGGCATGCCGTGTTCTAGAAGATGGAGTTGTTATTCGAGCATCAGACCTTGACATTGCATCTGTTCTTGGAATGAGCTTCCCAAATTACCGGTTTGATTTCCTTTATTCACTCTTTAAAATTGACAATAACTGA
Predicted protein sequences of Glyma.09g191700
>Glyma.09g191700.1.p sequence-type=predicted peptide transcript=Glyma.09g191700.1 locus=Glyma.09g191700 ID=Glyma.09g191700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MALPKVDFEVGADGVAVITMCNPPVNALAIPIIMGLKNRFDEAARRNDVKAIVLTGKGGRFSGGFDISVMQKVHRTGDSSHLPDVSVELVVNSIEDSKKPVVAAVAGLALGGGLELAMGCHARVAAPRAQLGLPELTLGIIPGFGGTQRLPRLIGLSKAVEMMLTSKPITSEEGRKLGLIDAIVSSEELLNASRLWALEIGERCKPWVRSLHRTDKIGSLSEAREVLRTARQQVKKTVPHLPQQLACVDVIEHGIVHGGYSGVLKEAEVFKQLVVSDTAKGLINVFFSQRAISKVPGVTDIGLKPRNVKKAAVIGGGLMGSGIATALILGNIHVILKEINPEFLLKGIKTIEANVNGLVRRGKLTKQKADAALSLLRGVLDYSEFKDVDLVIEAVIENISLKQTIFSDLEKICPPHCILASNTSTIDLDVVGKTTSSQNRIAGAHFFSPAHIMPLLEIIRTDKTSAQVILDLITVGKIIKKTPVVVGNCTGFAVNKTFFPYSQGAHLLVNLGVDVFRIDTLIRNFGFPIGPFQLQDLAGYGVAVATSKVFADAFSDRIFKSPLLDLLIKSGRNGKNNGKGYYIYEKAGKPKPDPSILPIIEESRRLCNIMPNGKPISVTDQEIVEMILFPVVNEACRVLEDGVVIRASDLDIASVLGMSFPNYRGGIVFWADLVGANHIYTSLKKWAQLYGNFYKPSRYLEERALKGIPLSAPASSTPKSMARL*

>Glyma.09g191700.2.p sequence-type=predicted peptide transcript=Glyma.09g191700.2 locus=Glyma.09g191700 ID=Glyma.09g191700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MALPKVDFEVGADGVAVITMCNPPVNALAIPIIMGLKNRFDEAARRNDVKAIVLTGKGGRFSGGFDISVMQKVHRTGDSSHLPDVSVELVVNSIEDSKKPVVAAVAGLALGGGLELAMGCHARVAAPRAQLGLPELTLGIIPGFGGTQRLPRLIGLSKAVEMMLTSKPITSEEGRKLGLIDAIVSSEELLNASRLWALEIGERCKPWVRSLHRTDKIGSLSEAREVLRTARQQVKKTVPHLPQQLACVDVIEHGIVHGGYSGVLKEAEVFKQLVVSDTAKGLINVFFSQRAISKVPGVTDIGLKPRNVKKAAVIGGGLMGSGIATALILGNIHVILKEINPEFLLKGIKTIEANVNGLVRRGKLTKQKADAALSLLRGVLDYSEFKDVDLVIEAVIENISLKQTIFSDLEKICPPHCILASNTSTIDLDVVGKTTSSQNRIAGAHFFSPAHIMPLLEIIRTDKTSAQVILDLITVGKIIKKTPVVVGNCTGFAVNKTFFPYSQGAHLLVNLGVDVFRIDTLIRNFGFPIGPFQLQDLAGYGVAVATSKVFADAFSDRIFKSPLLDLLIKSGRNGKNNGKGYYIYEKAGKPKPDPSILPIIEESRRLCNIMPNGKPISVTDQEIVEMILFPVVNEACRVLEDGVVIRASDLDIASVLGMSFPNYRFDFLYSLFKIDNN*






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