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Report for Sequence Feature Glyma.09g155500

Feature Type:gene_model
Chromosome:Gm09
Start:37867284
stop:37869032
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.09g155500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G17860.1AT Kunitz family trypsin and protease inhibitor protein JGI N/AIEA
GO:0006508GO-bp proteolysis EnsemblGenomesN/AIEA
GO:0010951GO-bp negative regulation of endopeptidase activity EnsemblGenomesN/AIEA
GO:0004866GO-mf endopeptidase inhibitor activity EnsemblGenomesN/AIEA
GO:0004866GO-mf endopeptidase inhibitor activity JGI N/AIEA
GO:0008233GO-mf peptidase activity EnsemblGenomesN/AIEA
PF00197PFAM Trypsin and protease inhibitor JGI N/AIEA

Proteins Associated with Glyma.09g155500
LocusGene SymbolProtein Name
KTI-2 kunitz trypsin protease inhibitor

Expression Patterns of Glyma.09g155500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.09g155500
ParalogEvidenceComments
Glyma.16g206300 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.09g155500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma09g28310 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.09g155500
>Glyma.09g155500.1 sequence-type=CDS polypeptide=Glyma.09g155500.1.p locus=Glyma.09g155500 ID=Glyma.09g155500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGCCTACCCTACTATTATCCCTTTCCTTCCTGCCTCTCTTTGCTTTCCTGGCTCTTTCAGAAGATGTTGAACAAGTTGTGGACATAAGTGGCAACCCCATTTTCCCAGGTGGCACATATTACATTATGCCATCAACTTGGGGCGCTGCCGGTGGTGGATTGAAACTAGGCCGGACAGGAAACTCAAACTGCCCAGTTACTGTTTTGCAAGATTACTCAGAAATCTTCCGTGGCACACCAGTCAAATTCAGCATACCTGGGATAAGCCCTGGAATCATCTTTACAGGTACTCCACTTGAAATCGAGTTCGCAGAGAAACCTTATTGTGCTGAATCCTCCAAATGGGTGGCGTTTGTGGACAATGAAATCCAAAAGGCATGTGTGGGTATTGGTGGTCCTGAAGGTCATCCTGGTCAACAAACATTTAGTGGCACATTTAGCATTCAGAAATATAAATTTGGATACAAACTTGTGTTCTGTATCACTGGCTCAGGCACTTGTTTAGATATTGGAAGGTTTGATGCCAAAAATGGTGAGGGAGGAAGACGTTTGAATCTCACTGAGCATGAGGCCTTCGACATTGTTTTCATAGAAGCTTCTAAGGTTGATGGAATTATCAAGTCCGTAGTTTGA
Predicted protein sequences of Glyma.09g155500
>Glyma.09g155500.1.p sequence-type=predicted peptide transcript=Glyma.09g155500.1 locus=Glyma.09g155500 ID=Glyma.09g155500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKPTLLLSLSFLPLFAFLALSEDVEQVVDISGNPIFPGGTYYIMPSTWGAAGGGLKLGRTGNSNCPVTVLQDYSEIFRGTPVKFSIPGISPGIIFTGTPLEIEFAEKPYCAESSKWVAFVDNEIQKACVGIGGPEGHPGQQTFSGTFSIQKYKFGYKLVFCITGSGTCLDIGRFDAKNGEGGRRLNLTEHEAFDIVFIEASKVDGIIKSVV*






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